CuGenDBv2

Gene ID	Spg033160
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	mediator of RNA polymerase II transcription subunit 27
Genome location	scaffold5:5237834..5241938
RNA-Seq Expression	Spg033160
Synteny	Spg033160
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0016592 - mediator complex (cellular component) GO:0003713 - transcription coactivator activity (molecular function)
InterPro domains	IPR021627 - Mediator complex, subunit Med27

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596615.1 Mediator of RNA polymerase II transcription subunit 27, partial [Cucurbita argyrosperma subsp. sororia]

6.0e-189

92.74

Show/hide

Query:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQ PAQG TATVSP T   HS+GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP QKKPCFSHGV  +K+EELN
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN

Query:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        DS SLSDILTCMEKEVPDLKI TYERLDWLKQASALPSQANE SIGALKEHNYHS RMSP SL AT TDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV
        FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+GIQAKAALHPLLLWICSYQNLFSKAC +C   LSV
Subjt:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV

XP_022940393.1 mediator of RNA polymerase II transcription subunit 27 [Cucurbita moschata]

2.1e-189

93.01

Show/hide

Query:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQ PAQG TATVSP T   HS+GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP QKKPCFSHGV  +KQEELN
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN

Query:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        DS SLSDILTCMEKEVPDLKI TYERLDWLKQASALPSQANE SIGALKEHNYHS RMSP SL AT TDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV
        FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+GIQAKAALHPLLLWICSYQNLFSKAC +C   LSV
Subjt:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV

XP_023005694.1 mediator of RNA polymerase II transcription subunit 27 [Cucurbita maxima]

1.8e-188

92.47

Show/hide

Query:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQ PAQG TATVSP T   HS+GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP QKKPCFSHGV  +KQEELN
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN

Query:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        DS SLSDILTCMEKEVPDLKI TYERLDWLKQAS LPSQANE SIG LKEHNYHS RMSP SL AT TDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV
        FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+GIQAKAALHPLLLWICSYQNLFSKAC +C   LSV
Subjt:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV

XP_023539656.1 mediator of RNA polymerase II transcription subunit 27 [Cucurbita pepo subsp. pepo]

7.9e-189

92.74

Show/hide

Query:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQ PAQG TATVSP T   HS+GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSN+EP QKKPCFSHGV  +KQEELN
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN

Query:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        DS SLSDILTC+EKEVPDLKI TYERLDWLKQASAL SQANE SIGALKEHNYHS RMSP SL AT TDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV
        FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+GIQAKAALHPLLLWICSYQNLFSKAC +C   LSV
Subjt:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV

XP_038904949.1 mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida]

5.5e-190

92.2

Show/hide

Query:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQQPAQGQTATVSPNTAPPHS  SA++APPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DENGSN EP  KKPCFSHGV  +KQ ELN
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN

Query:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        DSRSLS+ILTCMEKEVP+LKI TYERLDWLKQASALPSQANE SIG LKEH+YHS RMSPGSLGATP DKA VIEL+IPSVFRAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV
        FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLG QAKAAL+PLLLWICSYQNLFSKAC +C   LSV
Subjt:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGT1 Uncharacterized protein

2.5e-180

88.71

Show/hide

Query:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MR  QQP+QGQTATVSP+T   HS  S ++APPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQS+KPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DEN SN EP  KKPCFSHGV  +KQ EL 
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN

Query:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        DSRSLSDIL+CMEKEVP+LKI TYERLDWLKQASALPSQANE SIGALKEH+YHS RMSPG+LGATP DKA VIELIIPSVFRAVVSLHPVGSVEPDA+A
Subjt:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV
        FFSPDERGSHVHARGFSN+HLFRHVTEHAATVLQYFLG Q KAAL+PLLLWICSYQNLFSKAC +C   LSV
Subjt:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV

A0A1S3B7L6 mediator of RNA polymerase II transcription subunit 27

8.5e-181

88.44

Show/hide

Query:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MR  QQP+QGQTATVSPNT   HS  SA++APPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQS+KPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DEN SN EP  KKPCFSHGV  +KQ EL 
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN

Query:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        DSRSLSDIL+C+EKEVP+LKI TYERLDWLKQASALPSQANE SIGALKEH+YHS RMSPG+LGATP DKA VIELIIPSVFRAVVSLHP+GSVEPDA+A
Subjt:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV
        FFSPDERGSHVHARGFSN+H+FRHVTEHAATVLQYFLG Q KAAL+PLLLWICSYQNLFSKAC +C   LSV
Subjt:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV

A0A6J1DC62 mediator of RNA polymerase II transcription subunit 27

5.9e-182

89.25

Show/hide

Query:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQQPAQGQTATVSPNTA PHS GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTA PHQSTKPLHLFQKED SMRQHL DLRAVGKQ
Subjt:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDE+  N+EP  KKPCFSHGV  IKQ+ELN
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN

Query:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        + R+LSDILTCMEKEVPDLKI TYERLDWLKQA AL SQAN+ SIGALKEHNYHS RM PGSL A+  DK +VIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV
        FF+PDERGS+VHARGFS HHLFRHVTEHAATVLQYFLGIQ KAAL+PLLLWICSYQNLFSKAC +C   LSV
Subjt:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV

A0A6J1FP59 mediator of RNA polymerase II transcription subunit 27

1.0e-189

93.01

Show/hide

Query:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQ PAQG TATVSP T   HS+GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP QKKPCFSHGV  +KQEELN
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN

Query:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        DS SLSDILTCMEKEVPDLKI TYERLDWLKQASALPSQANE SIGALKEHNYHS RMSP SL AT TDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV
        FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+GIQAKAALHPLLLWICSYQNLFSKAC +C   LSV
Subjt:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV

A0A6J1KZZ9 mediator of RNA polymerase II transcription subunit 27

8.5e-189

92.47

Show/hide

Query:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
        MRQTQ PAQG TATVSP T   HS+GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ
Subjt:  MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP QKKPCFSHGV  +KQEELN
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELN

Query:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        DS SLSDILTCMEKEVPDLKI TYERLDWLKQAS LPSQANE SIG LKEHNYHS RMSP SL AT TDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  DSRSLSDILTCMEKEVPDLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV
        FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+GIQAKAALHPLLLWICSYQNLFSKAC +C   LSV
Subjt:  FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC-RCVYGLSV

SwissProt top hits

e value

%identity

Alignment

Q8RWM3 Mediator of RNA polymerase II transcription subunit 27

5.1e-114

63.29

Show/hide

Query:  NTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNS
        N A   +  S  +APPKQVA AM+RL  AAR+IADIRLGADR+LEA+ V +QP  +  PL LF +EDASMRQHL DLR +GK+LEESGVL+ESL SRSNS
Subjt:  NTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNS

Query:  WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELNDSRSLSDILTCMEKEVP
        WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPH+DD  G  +EP  KK   SH +    +EE  D ++L DI + +EK VP
Subjt:  WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELNDSRSLSDILTCMEKEVP

Query:  DLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFS
         +K+ TY RL+WLK+A++LP   ++    A K     SS++  G L     DK AVIEL  PS+FRA+VSL P GSV+PDAVAFFSPDE GS++HARGFS
Subjt:  DLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFS

Query:  NHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC
         +H+++H+TEHAAT LQYFLG     AL+ LLLWICS++++FSK C
Subjt:  NHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC

Arabidopsis top hits

e value

%identity

Alignment

AT3G09180.1 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).

3.6e-115

63.29

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Query:  NTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNS
        N A   +  S  +APPKQVA AM+RL  AAR+IADIRLGADR+LEA+ V +QP  +  PL LF +EDASMRQHL DLR +GK+LEESGVL+ESL SRSNS
Subjt:  NTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNS

Query:  WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELNDSRSLSDILTCMEKEVP
        WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPH+DD  G  +EP  KK   SH +    +EE  D ++L DI + +EK VP
Subjt:  WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELNDSRSLSDILTCMEKEVP

Query:  DLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFS
         +K+ TY RL+WLK+A++LP   ++    A K     SS++  G L     DK AVIEL  PS+FRA+VSL P GSV+PDAVAFFSPDE GS++HARGFS
Subjt:  DLKILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFS

Query:  NHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC
         +H+++H+TEHAAT LQYFLG     AL+ LLLWICS++++FSK C
Subjt:  NHHLFRHVTEHAATVLQYFLGIQAKAALHPLLLWICSYQNLFSKAC

Sequences

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CDS sequence

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ATGCGACAGACGCAGCAGCCTGCGCAGGGCCAGACTGCGACGGTGAGCCCTAACACTGCTCCGCCTCATTCTGCCGGCTCCGCGGAGGAGGCGCCGCCGAAGCAGGTAGC
ACTCGCCATGGACAGACTCGGCCACGCCGCCCGCCTTATCGCCGACATCAGGCTCGGCGCCGATCGCCTTCTCGAAGCCCTCTGCGTCACTGCTCAGCCTCACCAGAGCA
CCAAGCCTCTCCACTTGTTTCAGAAAGAAGACGCCTCCATGCGTCAACACCTTCTTGACCTTCGTGCAGTTGGGAAGCAGCTTGAAGAGTCTGGTGTTCTCAGTGAATCT
CTTCTTTCGAGAAGTAATTCTTGGGGTCTACATATGCCTTTAGTGTGTCCTGATGGCGCAGTGGTCGCTTATGCTTGGAAACGTCAACTAGCTGGCCAGGCTGGTGCATC
CGCAGTTGATCGGACCAGGTTAGCTCTAAAGGCCTTCACTGACCAGAAAAGACGGTTTTTCCCTCATCTTGATGATGAAAATGGGTCGAATGTTGAGCCTGTTCAGAAGA
AGCCTTGTTTTTCTCATGGAGTGGCATATATTAAACAAGAGGAGCTTAATGATTCTAGATCACTCTCAGATATTCTTACATGTATGGAAAAGGAAGTGCCAGACCTTAAG
ATCTTGACTTATGAGCGATTGGACTGGTTGAAACAAGCTTCTGCACTTCCCTCACAAGCAAATGAGATTTCCATAGGAGCCTTGAAAGAACATAACTACCATAGTTCTAG
GATGAGCCCCGGATCACTAGGTGCTACTCCCACAGATAAAGCTGCTGTGATTGAGTTGATCATTCCTTCTGTCTTTAGAGCCGTAGTATCACTGCATCCAGTTGGTTCTG
TTGAACCAGATGCTGTAGCTTTCTTTTCTCCTGATGAGAGAGGCAGCCATGTACATGCCAGGGGTTTTTCAAATCATCATTTGTTTAGACACGTGACGGAGCATGCTGCC
ACTGTGCTGCAGTATTTTCTTGGAATTCAAGCAAAAGCAGCTCTACATCCTCTATTGCTTTGGATCTGCAGCTACCAAAATTTATTTTCAAAAGCTTGTAGGTGCGTGTA
TGGATTGTCAGTGCTTCCATACTTGGTTCTGATGGATTTGACATTTTAA

mRNA sequence

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Protein sequence

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MRQTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSES
LLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVAYIKQEELNDSRSLSDILTCMEKEVPDLK
ILTYERLDWLKQASALPSQANEISIGALKEHNYHSSRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFSNHHLFRHVTEHAA
TVLQYFLGIQAKAALHPLLLWICSYQNLFSKACRCVYGLSVLPYLVLMDLTF

Spg033160 (gene) of Sponge gourd (cylindrica) v1 genome