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Spg033169 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033169
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein L35
Genome locationscaffold5:549754..550912
RNA-Seq ExpressionSpg033169
SyntenySpg033169
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650972.1 hypothetical protein Csa_002588 [Cucumis sativus]1.8e-4355.9Show/hide
Query:  VAMALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPY
        +AMA+GHRRS+KI+V AKI NLYIKLKAT+K PSGKFQRLLKLDKLLI  DSKS SRIL+Q+RRT++SR+LSF KK+LG RRSK           + H  
Subjt:  VAMALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPY

Query:  LAVETEYQSWRLGRVELSCVAAFGVGLGYLLAEFGSTLKKNVVVGINPSLSSFILVCLVLSVLWLHKCKFLWAM--LVAVVPLFLLEIDRFLQHL
           E+ Y+SW +G +E  CVAAFGVGLGY++    + ++  +   I PS SS I V L + VLWL KCK+LWAM  L+ + PL L ++D F+  L
Subjt:  LAVETEYQSWRLGRVELSCVAAFGVGLGYLLAEFGSTLKKNVVVGINPSLSSFILVCLVLSVLWLHKCKFLWAM--LVAVVPLFLLEIDRFLQHL

KAG6596309.1 hypothetical protein SDJN03_09489, partial [Cucurbita argyrosperma subsp. sororia]6.3e-6571.14Show/hide
Query:  MALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLA
        MALGHRRSWKITVHAK++NLYIK KATVK PSGKF+ LL LDKLL G DSKSESRIL+QQ RT++SRI+SF KK+  RRRSK+  GFKMPD     PYL 
Subjt:  MALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLA

Query:  VETEYQSWRLGRVELSCVAAFGVGLGYLLAEFG--STLKKNVVVGINPSLSSFILVCLVLSVLWLHKCKFLWAMLVAVVPLFLLEIDRFLQHLDSDLGQF
         ETEYQSWRL R E SC A FGVGLGYLLAEFG  +T+++   VGI PSLSSF+LVCLVL VL  HK KFLWAML+AV+ L LLEIDRFL+ +  DL QF
Subjt:  VETEYQSWRLGRVELSCVAAFGVGLGYLLAEFG--STLKKNVVVGINPSLSSFILVCLVLSVLWLHKCKFLWAMLVAVVPLFLLEIDRFLQHLDSDLGQF

Query:  W
        W
Subjt:  W

KAG7027863.1 hypothetical protein SDJN02_09040 [Cucurbita argyrosperma subsp. argyrosperma]4.9e-6571.64Show/hide
Query:  MALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLA
        MALGHRRSWKITVHAK++NLYIK KATVK PSGKF+ LL LDKLL G DSKSESRIL+QQ RT++SRI+SF KK+  RRRSK+  GFKMPD     PYL 
Subjt:  MALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLA

Query:  VETEYQSWRLGRVELSCVAAFGVGLGYLLAEFG--STLKKNVVVGINPSLSSFILVCLVLSVLWLHKCKFLWAMLVAVVPLFLLEIDRFLQHLDSDLGQF
         ETEYQSWRL R E SC A FGVGLGYLLAEFG  +T+K+   VGI PSLSSF+LVCLVL VL  HK KFLWAML+AV+ L LLEIDRFL+ +  DL QF
Subjt:  VETEYQSWRLGRVELSCVAAFGVGLGYLLAEFG--STLKKNVVVGINPSLSSFILVCLVLSVLWLHKCKFLWAMLVAVVPLFLLEIDRFLQHLDSDLGQF

Query:  W
        W
Subjt:  W

XP_023540743.1 uncharacterized protein LOC111801019 [Cucurbita pepo subsp. pepo]8.3e-6570.85Show/hide
Query:  MALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLA
        MALGHRRSWKITVHAK+++LYIK KATVK PSGKF+ LL LDKLL+G DSKSESRIL+QQ RT++SRI+SF KK+  RRRSK+  GFKMPD     PYL 
Subjt:  MALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLA

Query:  VETEYQSWRLGRVELSCVAAFGVGLGYLLAEFGSTLKKNVVVGINPSLSSFILVCLVLSVLWLHKCKFLWAMLVAVVPLFLLEIDRFLQHLDSDLGQFW
         ETEYQSWRLGR E SC A FGVGLGYLLAEFG++      VGI PSLSSF+LVC+VL VL  HK KFLWAML+AV+ L LLEIDRFL+ +  DL QFW
Subjt:  VETEYQSWRLGRVELSCVAAFGVGLGYLLAEFGSTLKKNVVVGINPSLSSFILVCLVLSVLWLHKCKFLWAMLVAVVPLFLLEIDRFLQHLDSDLGQFW

XP_038906422.1 uncharacterized protein LOC120092221 [Benincasa hispida]7.8e-4757.66Show/hide
Query:  FTTTCHSNSCFACSSRGSGSGCIVAMALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKY
        F   C    C AC       GC VAMALG RRS+KITVHAKI NLYIKLKAT+K PSGK QRLLKLDKLLIG DSKSES IL+Q+RRT++SR+LSF KK+
Subjt:  FTTTCHSNSCFACSSRGSGSGCIVAMALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKY

Query:  LGRRRSKSTFGFKMPDASYSHPYLAVETEYQSWRLGRVELSCVAAFGVGLGYLLAEFGSTLKKNVVVGINPSLSS--FILVCLVLSVLWLHKCK--FLWA
        LG  RS      KMP A         E+E QSW +GR+EL CVA FGVGLGYLLA         +   I+PS SS  ++ +CL+L VLWLHKCK  +LWA
Subjt:  LGRRRSKSTFGFKMPDASYSHPYLAVETEYQSWRLGRVELSCVAAFGVGLGYLLAEFGSTLKKNVVVGINPSLSS--FILVCLVLSVLWLHKCK--FLWA

Query:  M--LVAVVPLFLLEIDRFLQHL
        +  L+A++PLFLL++D+F+  L
Subjt:  M--LVAVVPLFLLEIDRFLQHL

TrEMBL top hitse value%identityAlignment
A0A0A0LCL9 50S ribosomal protein L356.2e-3457.69Show/hide
Query:  MALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLA
        MA+GHRRS+KI+V AKI NLYIKLKAT+K PSGKFQRLLKLDKLLI  DSKS SRIL+Q+RRT++SR+LSF KK+LG RRSK           + H    
Subjt:  MALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLA

Query:  VETEYQSWRLGRVELSCVAAFGVGLGYLLAEFGSTLKKNVVVGINPSLSSFILVCL
         E+ Y+SW +G +E  CVAAFGVGLGY++    + ++  +   I PS SS I V L
Subjt:  VETEYQSWRLGRVELSCVAAFGVGLGYLLAEFGSTLKKNVVVGINPSLSSFILVCL

A0A1R3KWS9 Uncharacterized protein (Fragment)2.3e-0442.05Show/hide
Query:  MALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQR---LLKLDKLLIGGDSKSESRILI--QQRRTMRSRILSFFKKYLGRRRSKS
        M +G +R WK ++ AK      KLKAT   P+ KF R   LL+L+K +I    KS S I +  QQ+RT++SR L F +K   RR  K+
Subjt:  MALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQR---LLKLDKLLIGGDSKSESRILI--QQRRTMRSRILSFFKKYLGRRRSKS

A0A1S3B4Y8 uncharacterized protein LOC1034862297.1e-3853.33Show/hide
Query:  MALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLA
        MA+GHRRS+KI+VHAKI NLYIKLKAT+K PSGKFQRLLKLDKLLI  DSKSESR+L+Q+RRT++SR+LSF KK+LGR RS      K+P +        
Subjt:  MALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLA

Query:  VETEYQSWRLGRVELSCVAAFGVGLGYLLAEFGSTLKKNVVV--GINPSLSSFILVCLVLSVLWLHKCKFLWA--MLVAVVPLFLLEIDRFLQHL
         E++YQSW +G          GVG GYL+A     LK  + +   +  S SS I V L + V+WL KCK+LWA  +LV + PL L ++D F+  L
Subjt:  VETEYQSWRLGRVELSCVAAFGVGLGYLLAEFGSTLKKNVVV--GINPSLSSFILVCLVLSVLWLHKCKFLWA--MLVAVVPLFLLEIDRFLQHL

A0A5A7TM08 RING-H2 finger protein ATL74-like1.2e-2960.61Show/hide
Query:  VAMALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPY
        VAMA+GHRRS+KI+VHAKI NLYIKLKAT+K PSGKFQRLLKLDKLLI  DSKSESR+L+Q+RRT++SR+LSF KK+LGR RS      K+P +      
Subjt:  VAMALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPY

Query:  LAVETEYQSWRLGRVELSCVAAFGVGLGYLLA
           E++YQ W +G          GVG GYL+A
Subjt:  LAVETEYQSWRLGRVELSCVAAFGVGLGYLLA

A0A5D3DNQ2 50S ribosomal protein L355.1e-2860.63Show/hide
Query:  GHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLAVET
        GHRRS+KI+VHAKI NLYIKLKAT+K PSGKFQRLLKLDKLLI  DSKSESR+L+Q+RRT++SR+LSF KK+LGR RS      K+P +         E+
Subjt:  GHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDSKSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLAVET

Query:  EYQSWRLGRVELSCVAAFGVGLGYLLA
        +YQSW +G          GVG GYL+A
Subjt:  EYQSWRLGRVELSCVAAFGVGLGYLLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTCTTTTTCATTCAATTCAACAAATATGAGGTGGTGATGCAACAAAGAAAACAAATCCTCATTCATTCTGTCAGTATCCCAGTGGCCAGTTCCATTCATTTCAC
CACCACATGCCACTCGAATTCGTGCTTCGCTTGCTCCAGTCGTGGAAGTGGCAGTGGCTGTATCGTTGCAATGGCGTTAGGTCATCGGCGGTCATGGAAAATCACGGTTC
ATGCCAAGATCAGTAACCTTTATATCAAGCTCAAGGCCACTGTAAAATGTCCTTCCGGGAAATTCCAACGCCTCCTTAAGCTGGACAAATTACTCATCGGAGGGGATTCA
AAATCCGAATCTCGGATCCTCATTCAACAACGGAGGACTATGAGATCTCGAATACTCAGCTTCTTCAAGAAATATCTCGGGCGTCGCCGATCTAAAAGCACTTTTGGCTT
CAAAATGCCGGATGCCTCGTACTCACACCCGTACCTAGCTGTTGAAACTGAATATCAATCTTGGCGTTTGGGCCGTGTGGAATTAAGTTGTGTGGCTGCATTTGGTGTTG
GATTGGGTTATCTGCTTGCGGAATTTGGCTCCACACTGAAGAAAAACGTTGTCGTTGGCATCAATCCCAGCTTGAGTTCCTTTATATTGGTGTGCCTGGTTTTATCTGTT
CTATGGTTGCACAAATGTAAGTTCCTTTGGGCAATGCTAGTCGCTGTGGTTCCTCTCTTTCTGCTAGAAATCGATAGATTTCTACAACATTTAGATTCAGATTTAGGGCA
GTTTTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTCTTTTTCATTCAATTCAACAAATATGAGGTGGTGATGCAACAAAGAAAACAAATCCTCATTCATTCTGTCAGTATCCCAGTGGCCAGTTCCATTCATTTCAC
CACCACATGCCACTCGAATTCGTGCTTCGCTTGCTCCAGTCGTGGAAGTGGCAGTGGCTGTATCGTTGCAATGGCGTTAGGTCATCGGCGGTCATGGAAAATCACGGTTC
ATGCCAAGATCAGTAACCTTTATATCAAGCTCAAGGCCACTGTAAAATGTCCTTCCGGGAAATTCCAACGCCTCCTTAAGCTGGACAAATTACTCATCGGAGGGGATTCA
AAATCCGAATCTCGGATCCTCATTCAACAACGGAGGACTATGAGATCTCGAATACTCAGCTTCTTCAAGAAATATCTCGGGCGTCGCCGATCTAAAAGCACTTTTGGCTT
CAAAATGCCGGATGCCTCGTACTCACACCCGTACCTAGCTGTTGAAACTGAATATCAATCTTGGCGTTTGGGCCGTGTGGAATTAAGTTGTGTGGCTGCATTTGGTGTTG
GATTGGGTTATCTGCTTGCGGAATTTGGCTCCACACTGAAGAAAAACGTTGTCGTTGGCATCAATCCCAGCTTGAGTTCCTTTATATTGGTGTGCCTGGTTTTATCTGTT
CTATGGTTGCACAAATGTAAGTTCCTTTGGGCAATGCTAGTCGCTGTGGTTCCTCTCTTTCTGCTAGAAATCGATAGATTTCTACAACATTTAGATTCAGATTTAGGGCA
GTTTTGGTAA
Protein sequenceShow/hide protein sequence
MFFFFIQFNKYEVVMQQRKQILIHSVSIPVASSIHFTTTCHSNSCFACSSRGSGSGCIVAMALGHRRSWKITVHAKISNLYIKLKATVKCPSGKFQRLLKLDKLLIGGDS
KSESRILIQQRRTMRSRILSFFKKYLGRRRSKSTFGFKMPDASYSHPYLAVETEYQSWRLGRVELSCVAAFGVGLGYLLAEFGSTLKKNVVVGINPSLSSFILVCLVLSV
LWLHKCKFLWAMLVAVVPLFLLEIDRFLQHLDSDLGQFW