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Spg033170 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033170
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold5:3359365..3365345
RNA-Seq ExpressionSpg033170
SyntenySpg033170
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0009987 - cellular process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041012.1 uncharacterized protein E6C27_scaffold125G002320 [Cucumis melo var. makuwa]2.2e-2345.19Show/hide
Query:  RPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWKVKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVWD
        R  S +E T + +LLS +   +F   R+DI VW+P+PS GF   S F  LLDPAP++  +F ++W   VPK V FFIWQ    +       C FAR VW 
Subjt:  RPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWKVKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVWD

Query:  EFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKF
         F   FG+ FA  R L+ TIEEFL HP F+++G F
Subjt:  EFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKF

KAA0043240.1 zinc finger protein ZPR1-like [Cucumis melo var. makuwa]1.5e-1938.82Show/hide
Query:  SYCFGFARPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWKVKVPKNVQFFIWQDSGGRPRSYLWSCV
        S+  GF   L++RE T + +LLS +    F   R+D+RVWSP+PS     +S F  LLDP+P   S+F ++W+ KVPK V+FFI              CV
Subjt:  SYCFGFARPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWKVKVPKNVQFFIWQDSGGRPRSYLWSCV

Query:  FARTVWDEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAII
              + F    G  FAR R ++ TIEEFL H  F ++G F W A +  I+
Subjt:  FARTVWDEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAII

KAA0060009.1 mitochondrial import inner membrane translocase subunit TIM22-4-like [Cucumis melo var. makuwa]9.0e-1733.16Show/hide
Query:  SREIPVRGSGSSLSYC-FGF-----------ARPLSDRETTDLVTLLS--SIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWK
        ++++  RG GS+ S+   GF           AR   D   T +   ++  +I    F   R+D+RVWSP+P  GFSC+SFF+ L++ +    S+F +LW 
Subjt:  SREIPVRGSGSSLSYC-FGF-----------ARPLSDRETTDLVTLLS--SIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWK

Query:  VKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVW-------DEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIW
        +K+PK         SG     +   C+  RT W         FF  F +  A  R +   I EFL HP FR +G FL   G+C +IW
Subjt:  VKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVW-------DEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIW

TYJ97267.1 mitochondrial import inner membrane translocase subunit TIM22-4-like [Cucumis melo var. makuwa]9.0e-1733.16Show/hide
Query:  SREIPVRGSGSSLSYC-FGF-----------ARPLSDRETTDLVTLLS--SIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWK
        ++++  RG GS+ S+   GF           AR   D   T +   ++  +I    F   R+D+RVWSP+P  GFSC+SFF+ L++ +    S+F +LW 
Subjt:  SREIPVRGSGSSLSYC-FGF-----------ARPLSDRETTDLVTLLS--SIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWK

Query:  VKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVW-------DEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIW
        +K+PK         SG     +   C+  RT W         FF  F +  A  R +   I EFL HP FR +G FL   G+C +IW
Subjt:  VKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVW-------DEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIW

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]5.6e-3545.06Show/hide
Query:  SGSSLSYCFGFARPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWKVKVPKNVQFFIWQDSGGRPRSY
        +G+S S+ FGF R LSDRET+++V L+S +   +F   R+D+ VWSP P  GF C+SFFQCL++  P+  S+ SL+W++KVP+    F WQ         
Subjt:  SGSSLSYCFGFARPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWKVKVPKNVQFFIWQDSGGRPRSY

Query:  LWSCVFARTVWDEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIWGLWG
        LW C     VWD+F   FGL +ARHR ++ T+EEFL + P  E+G FLW A + A + G  G
Subjt:  LWSCVFARTVWDEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIWGLWG

TrEMBL top hitse value%identityAlignment
A0A5A7TIU4 Zinc finger protein ZPR1-like7.1e-2038.82Show/hide
Query:  SYCFGFARPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWKVKVPKNVQFFIWQDSGGRPRSYLWSCV
        S+  GF   L++RE T + +LLS +    F   R+D+RVWSP+PS     +S F  LLDP+P   S+F ++W+ KVPK V+FFI              CV
Subjt:  SYCFGFARPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWKVKVPKNVQFFIWQDSGGRPRSYLWSCV

Query:  FARTVWDEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAII
              + F    G  FAR R ++ TIEEFL H  F ++G F W A +  I+
Subjt:  FARTVWDEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAII

A0A5A7V2G8 Mitochondrial import inner membrane translocase subunit TIM22-4-like4.3e-1733.16Show/hide
Query:  SREIPVRGSGSSLSYC-FGF-----------ARPLSDRETTDLVTLLS--SIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWK
        ++++  RG GS+ S+   GF           AR   D   T +   ++  +I    F   R+D+RVWSP+P  GFSC+SFF+ L++ +    S+F +LW 
Subjt:  SREIPVRGSGSSLSYC-FGF-----------ARPLSDRETTDLVTLLS--SIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWK

Query:  VKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVW-------DEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIW
        +K+PK         SG     +   C+  RT W         FF  F +  A  R +   I EFL HP FR +G FL   G+C +IW
Subjt:  VKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVW-------DEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIW

A0A5D3BDR8 Mitochondrial import inner membrane translocase subunit TIM22-4-like4.3e-1733.16Show/hide
Query:  SREIPVRGSGSSLSYC-FGF-----------ARPLSDRETTDLVTLLS--SIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWK
        ++++  RG GS+ S+   GF           AR   D   T +   ++  +I    F   R+D+RVWSP+P  GFSC+SFF+ L++ +    S+F +LW 
Subjt:  SREIPVRGSGSSLSYC-FGF-----------ARPLSDRETTDLVTLLS--SIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWK

Query:  VKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVW-------DEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIW
        +K+PK         SG     +   C+  RT W         FF  F +  A  R +   I EFL HP FR +G FL   G+C +IW
Subjt:  VKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVW-------DEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIW

A0A5D3CI74 Calpain-type cysteine protease DEK12.7e-3545.06Show/hide
Query:  SGSSLSYCFGFARPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWKVKVPKNVQFFIWQDSGGRPRSY
        +G+S S+ FGF R LSDRET+++V L+S +   +F   R+D+ VWSP P  GF C+SFFQCL++  P+  S+ SL+W++KVP+    F WQ         
Subjt:  SGSSLSYCFGFARPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWKVKVPKNVQFFIWQDSGGRPRSY

Query:  LWSCVFARTVWDEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIWGLWG
        LW C     VWD+F   FGL +ARHR ++ T+EEFL + P  E+G FLW A + A + G  G
Subjt:  LWSCVFARTVWDEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIWGLWG

A0A5D3DA77 Reverse transcriptase domain-containing protein1.1e-2345.19Show/hide
Query:  RPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWKVKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVWD
        R  S +E T + +LLS +   +F   R+DI VW+P+PS GF   S F  LLDPAP++  +F ++W   VPK V FFIWQ    +       C FAR VW 
Subjt:  RPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFSLLWKVKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVWD

Query:  EFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKF
         F   FG+ FA  R L+ TIEEFL HP F+++G F
Subjt:  EFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACGGGGCGGGGCGGGGTCGGGGATGCACTCCTCATCCCCATCCCCGCCCCATTCCCCGTTTCGGAGAATCGGGATCGGAGTCGAGAAATCCCCGTTCGGGGATC
AGGGAGCTCTTTATCTTATTGCTTTGGCTTCGCACGTCCGTTGTCTGATCGTGAAACAACGGACCTCGTGACTCTCCTTTCTTCGATTGGGGAAACCGCTTTTAGTACTA
CTAGGAAAGACATTCGAGTCTGGAGCCCCGACCCTTCCCTCGGTTTTTCTTGTCGTTCTTTCTTCCAATGCCTTTTGGACCCTGCTCCCTCTGAGCGTTCCATTTTTTCA
TTATTGTGGAAGGTGAAAGTTCCAAAGAATGTGCAGTTTTTTATTTGGCAGGATAGCGGAGGAAGACCTCGATCATATTTGTGGAGCTGCGTTTTTGCTAGGACAGTGTG
GGATGAGTTCTTTGGCTTGTTCGGGTTGCAGTTTGCCAGACACAGAGGCCTCAAAGAGACGATCGAGGAGTTCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTT
TGTGGCAAGCTGGGATTTGTGCTATTATTTGGGGGTTGTGGGGTGATGTATACAGGGTCTCTCCAGTCATTCCATCCGTTGGCGGCGACGACGTCGGTCATGTACGTGTT
GGAGAAGACGACGGTGGCGGAGACGCCCCAGGCGCGGCCGAGCCACACCTTGCCAGAGCCATGGATGGTGCAGTTGATGAAAGCAAAACCAGTTTCCTCGCTGCTTGTTT
GCCTTCCTTGAGCTGTGATGGCTCCACTCACCCCACCACCCCATACTTCCTTTGCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACGGGGCGGGGCGGGGTCGGGGATGCACTCCTCATCCCCATCCCCGCCCCATTCCCCGTTTCGGAGAATCGGGATCGGAGTCGAGAAATCCCCGTTCGGGGATC
AGGGAGCTCTTTATCTTATTGCTTTGGCTTCGCACGTCCGTTGTCTGATCGTGAAACAACGGACCTCGTGACTCTCCTTTCTTCGATTGGGGAAACCGCTTTTAGTACTA
CTAGGAAAGACATTCGAGTCTGGAGCCCCGACCCTTCCCTCGGTTTTTCTTGTCGTTCTTTCTTCCAATGCCTTTTGGACCCTGCTCCCTCTGAGCGTTCCATTTTTTCA
TTATTGTGGAAGGTGAAAGTTCCAAAGAATGTGCAGTTTTTTATTTGGCAGGATAGCGGAGGAAGACCTCGATCATATTTGTGGAGCTGCGTTTTTGCTAGGACAGTGTG
GGATGAGTTCTTTGGCTTGTTCGGGTTGCAGTTTGCCAGACACAGAGGCCTCAAAGAGACGATCGAGGAGTTCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTT
TGTGGCAAGCTGGGATTTGTGCTATTATTTGGGGGTTGTGGGGTGATGTATACAGGGTCTCTCCAGTCATTCCATCCGTTGGCGGCGACGACGTCGGTCATGTACGTGTT
GGAGAAGACGACGGTGGCGGAGACGCCCCAGGCGCGGCCGAGCCACACCTTGCCAGAGCCATGGATGGTGCAGTTGATGAAAGCAAAACCAGTTTCCTCGCTGCTTGTTT
GCCTTCCTTGAGCTGTGATGGCTCCACTCACCCCACCACCCCATACTTCCTTTGCTATTGA
Protein sequenceShow/hide protein sequence
MATGRGGVGDALLIPIPAPFPVSENRDRSREIPVRGSGSSLSYCFGFARPLSDRETTDLVTLLSSIGETAFSTTRKDIRVWSPDPSLGFSCRSFFQCLLDPAPSERSIFS
LLWKVKVPKNVQFFIWQDSGGRPRSYLWSCVFARTVWDEFFGLFGLQFARHRGLKETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGDVYRVSPVIPSVGGDDVGHVRV
GEDDGGGDAPGAAEPHLARAMDGAVDESKTSFLAACLPSLSCDGSTHPTTPYFLCY