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Spg033183 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033183
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSRP54 domain-containing protein
Genome locationscaffold5:4406742..4407976
RNA-Seq ExpressionSpg033183
SyntenySpg033183
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596576.1 Rho GTPase-activating protein 1, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2877.78Show/hide
Query:  GRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKA-VEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLREN
        GRD   T GAGSRFPAVDVD ELHPGHN+HV VDP+SSQVAAS++ KEQAKRKA VEEE ++ K K+ MQTLKTTFIVSG+IAAVAVAAFV+VKKLR+N
Subjt:  GRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKA-VEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLREN

XP_022144747.1 uncharacterized protein LOC111014362 [Momordica charantia]2.9e-2976.47Show/hide
Query:  MASPGRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKAVEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLR
        MASPG D  V+D AGS FPA DVD EL+PGHN+HVEVDPVSS+VA SL+ KEQAKRKAVEEE K+ K  + M+TLKTTFIVSG+IAAVAVAAF IVKKLR
Subjt:  MASPGRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKAVEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLR

Query:  EN
        EN
Subjt:  EN

XP_022947065.1 uncharacterized protein LOC111451047 [Cucurbita moschata]5.2e-3178.64Show/hide
Query:  MASPGRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKA-VEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKL
        MASPGRD   T GAGSRFPAVDVD ELHPGHN+HV VDP+SSQVAAS++ KEQAKRKA VEEE K+ K K+ MQTLKTTFIVSG++AAVAVAAFV+VKKL
Subjt:  MASPGRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKA-VEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKL

Query:  REN
        R+N
Subjt:  REN

XP_023005785.1 uncharacterized protein LOC111498680 [Cucurbita maxima]4.0e-3179.61Show/hide
Query:  MASPGRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKA-VEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKL
        MASPGRD   T GAGSRFPAVDVD ELHPGHN+HV VDP+SSQVAAS++ KEQAKRKA VEEE K+ K K+ MQTLKTTFIVSG+IAAVAVAAFV+VKKL
Subjt:  MASPGRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKA-VEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKL

Query:  REN
        R+N
Subjt:  REN

XP_023539528.1 uncharacterized protein LOC111800168 [Cucurbita pepo subsp. pepo]7.8e-2779.78Show/hide
Query:  GSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKA-VEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLREN
        GSRFPAVDVD ELHPGHN+HV VDP+SSQVAAS++ KEQAKRKA VEEE K+ K K+ MQTLKTTFIVSG++AAVAVAAFV+VKKLR+N
Subjt:  GSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKA-VEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLREN

TrEMBL top hitse value%identityAlignment
A0A0A0LBF7 Uncharacterized protein3.2e-2675.49Show/hide
Query:  MASPGRDEVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKAVEEEGKK-KKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLR
        M S GRD      G  FPAVDV+ EL+PG NKHVEVDPVSSQVA SL+AKE  KRKA E+E K+ KK KEAMQTLKTTFIVSGIIAAVAVAAF IVKKLR
Subjt:  MASPGRDEVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKAVEEEGKK-KKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLR

Query:  EN
        EN
Subjt:  EN

A0A1S3B6R1 uncharacterized protein LOC1034866219.3e-2674.51Show/hide
Query:  MASPGRDEVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKAVEEEGKK-KKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLR
        M S GRD      G  FPAVDV+ EL+PG NKHVEVDP+SSQVA SL+AKE  KR A EEE K+ KK KEAMQTLKTTFIVSGIIAAVAVAAF IVKKLR
Subjt:  MASPGRDEVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKAVEEEGKK-KKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLR

Query:  EN
        EN
Subjt:  EN

A0A6J1CUK2 uncharacterized protein LOC1110143621.4e-2976.47Show/hide
Query:  MASPGRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKAVEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLR
        MASPG D  V+D AGS FPA DVD EL+PGHN+HVEVDPVSS+VA SL+ KEQAKRKAVEEE K+ K  + M+TLKTTFIVSG+IAAVAVAAF IVKKLR
Subjt:  MASPGRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKAVEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLR

Query:  EN
        EN
Subjt:  EN

A0A6J1G5S8 uncharacterized protein LOC1114510472.5e-3178.64Show/hide
Query:  MASPGRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKA-VEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKL
        MASPGRD   T GAGSRFPAVDVD ELHPGHN+HV VDP+SSQVAAS++ KEQAKRKA VEEE K+ K K+ MQTLKTTFIVSG++AAVAVAAFV+VKKL
Subjt:  MASPGRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKA-VEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKL

Query:  REN
        R+N
Subjt:  REN

A0A6J1KYC8 uncharacterized protein LOC1114986801.9e-3179.61Show/hide
Query:  MASPGRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKA-VEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKL
        MASPGRD   T GAGSRFPAVDVD ELHPGHN+HV VDP+SSQVAAS++ KEQAKRKA VEEE K+ K K+ MQTLKTTFIVSG+IAAVAVAAFV+VKKL
Subjt:  MASPGRD-EVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKA-VEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKL

Query:  REN
        R+N
Subjt:  REN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52620.1 unknown protein2.6e-1248.24Show/hide
Query:  FPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKAVEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLREN
        FP  D + EL+PG NK+ EVDPVSS++A+      +  +K VE+    K  ++  +TLK T IVS +I AVA AAF I KKL+EN
Subjt:  FPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKAVEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLREN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCCCAGGCAGAGATGAAGTTACCGACGGAGCAGGTTCCCGGTTTCCGGCAGTGGACGTGGACGGAGAATTGCATCCCGGCCATAACAAGCACGTTGAGGTCGA
TCCCGTTTCCTCACAAGTTGCTGCATCTTTGGATGCTAAGGAGCAAGCGAAGAGGAAAGCAGTGGAAGAAGAAGGAAAGAAGAAGAAGGATAAAGAAGCGATGCAGACAT
TGAAGACGACGTTCATCGTCTCCGGCATCATCGCCGCGGTGGCGGTAGCTGCCTTCGTCATTGTTAAGAAATTACGAGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCCCAGGCAGAGATGAAGTTACCGACGGAGCAGGTTCCCGGTTTCCGGCAGTGGACGTGGACGGAGAATTGCATCCCGGCCATAACAAGCACGTTGAGGTCGA
TCCCGTTTCCTCACAAGTTGCTGCATCTTTGGATGCTAAGGAGCAAGCGAAGAGGAAAGCAGTGGAAGAAGAAGGAAAGAAGAAGAAGGATAAAGAAGCGATGCAGACAT
TGAAGACGACGTTCATCGTCTCCGGCATCATCGCCGCGGTGGCGGTAGCTGCCTTCGTCATTGTTAAGAAATTACGAGAAAACTGA
Protein sequenceShow/hide protein sequence
MASPGRDEVTDGAGSRFPAVDVDGELHPGHNKHVEVDPVSSQVAASLDAKEQAKRKAVEEEGKKKKDKEAMQTLKTTFIVSGIIAAVAVAAFVIVKKLREN