; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg033198 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033198
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold5:1175515..1182935
RNA-Seq ExpressionSpg033198
SyntenySpg033198
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3448904.1 hypothetical protein FNV43_RR09620 [Rhamnella rubrinervis]3.1e-14591.64Show/hide
Query:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSS-KPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQN
        MATTT AAA ASSF+GTRLP   S SGR QARF F  G +K PPKK+S KPS+DRPLWYPGA APEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQN
Subjt:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSS-KPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQN

Query:  LAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIG
        LAKN+AGDVIGTRFENADVKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGALTVEWLTG+TWQDAGKVELVEGSSYLGQPLPFSI+TLIWIEVLVIG
Subjt:  LAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIG

Query:  YIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        YIEFQRNAELDPEKRLYPGGK+FDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Subjt:  YIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

KAF5953627.1 hypothetical protein HYC85_006483 [Camellia sinensis]3.5e-14489.2Show/hide
Query:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL
        MA TT +AAA SSFIGTR P   SGSGR QARF F  G +K+P KK +KP SDRPLW+PGA APEWLDG+LVGDYGFDPFGLGKPAEYLQFELDSLDQNL
Subjt:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL

Query:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY
        AKN+AGD+IGTRFE+ADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTG+TWQDAGKVEL+EGSSYLGQPLPFSI+TLIWIEVLVIGY
Subjt:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY

Query:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF
        IEFQRN+ELDPEKRLYPGGKYFDPLGLA+DPEKKATLQLAEIKHARLAM+AFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF
Subjt:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF

XP_015897179.1 chlorophyll a-b binding protein CP29.2, chloroplastic [Ziziphus jujuba]1.3e-14392.66Show/hide
Query:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL
        MATTT AAAAASSFIGTRLP   S SGR QARF FG GK KS PKKS KPSSDRPLWYPGA APEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL
Subjt:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL

Query:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY
        AKN+AGDVIGTR E +DVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGA+TVE LTGVTWQDAGKVELVEGSSYLGQPLPFSI+TLIWIEVLVIGY
Subjt:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY

Query:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        IEFQRNAELDPEKRLYPGGK+FDPLGLAADPEKKATLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

XP_028072131.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Camellia sinensis]2.9e-14389.16Show/hide
Query:  ATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLA
        ATT  AAAA SSF+GTRL    SGSGR QARF F  G++K+PPKK +K   DRPLWYPGA APEWLDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLA
Subjt:  ATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLA

Query:  KNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYI
        KN AGDVIGTRFE+ADVKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVEL+EGSSYLGQPLPFSI+TLIWIEV+VIGYI
Subjt:  KNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYI

Query:  EFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF
        EFQRNAELDPEKRLYPGGK+FDPLGLA+DPEKKATLQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIIDTFF
Subjt:  EFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF

XP_038904041.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]1.0e-15195.77Show/hide
Query:  AAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSS-KPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAG
        AAAASSFIGTRLPVAP+GSGR QARFSF  GKQKSPPKKSS KP SDRPLW+PGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKNVAG
Subjt:  AAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSS-KPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAG

Query:  DVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN
        DVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN
Subjt:  DVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN

Query:  AELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFFFSS
         ELDPEKRLYPGGKYFDPLGLAADPEKK TLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT F+SS
Subjt:  AELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFFFSS

TrEMBL top hitse value%identityAlignment
A0A4S4DT89 Chlorophyll a-b binding protein, chloroplastic1.4e-14388.85Show/hide
Query:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL
        MA TT +AAA SSFIGTR P   SGSGR QARF F  G +K+P KK +KP SDRPLW+PGA APEWLDG+LVGDYGFDPFGLGKPAEYLQFELDSLDQNL
Subjt:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL

Query:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY
        AKN+AGD+IGTRFE+ADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTG+TWQDAGKVEL+EGSSYLGQPLPFSI+TLIWIEVLVIGY
Subjt:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY

Query:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF
        IEFQRN+ELDPEKRLYPGGKYFDPLGLA+DPEKKATLQLAEIKHARLAM+A LGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF
Subjt:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF

A0A6J1DCA5 Chlorophyll a-b binding protein, chloroplastic7.0e-14388.28Show/hide
Query:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL
        MA  T  AAA SSFIGTRLP     SGR QARFSF  GK+K+ PKKSSK  SDRPLW+PGA APEWLDGSLVGDYGFDPFGLGKPAEYLQ++LDSLDQNL
Subjt:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL

Query:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY
        AKNVAGD+IGTRFEN+DVKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFSI+TLIWIEVLVIGY
Subjt:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY

Query:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFFFSS
        IEFQRNAELDPEKRLYPGGK+FDPLGLA DPEKKA LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID+F  SS
Subjt:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFFFSS

A0A6P4AP94 Chlorophyll a-b binding protein, chloroplastic6.4e-14492.66Show/hide
Query:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL
        MATTT AAAAASSFIGTRLP   S SGR QARF FG GK KS PKKS KPSSDRPLWYPGA APEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL
Subjt:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL

Query:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY
        AKN+AGDVIGTR E +DVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGA+TVE LTGVTWQDAGKVELVEGSSYLGQPLPFSI+TLIWIEVLVIGY
Subjt:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY

Query:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        IEFQRNAELDPEKRLYPGGK+FDPLGLAADPEKKATLQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

A0A7J7HME2 Chlorophyll a-b binding protein, chloroplastic1.7e-14489.2Show/hide
Query:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL
        MA TT +AAA SSFIGTR P   SGSGR QARF F  G +K+P KK +KP SDRPLW+PGA APEWLDG+LVGDYGFDPFGLGKPAEYLQFELDSLDQNL
Subjt:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL

Query:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY
        AKN+AGD+IGTRFE+ADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTG+TWQDAGKVEL+EGSSYLGQPLPFSI+TLIWIEVLVIGY
Subjt:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY

Query:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF
        IEFQRN+ELDPEKRLYPGGKYFDPLGLA+DPEKKATLQLAEIKHARLAM+AFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF
Subjt:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF

B9SQ36 Chlorophyll a-b binding protein, chloroplastic2.4e-14390.21Show/hide
Query:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL
        MAT+T AAAAASSF+GTRLP   S SGR QARF F  G +KS PK+S+KP+SDRPLWYPGA APEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL
Subjt:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNL

Query:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY
        AKN+AGD+IGTR E ADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSI+TLIWIEVLVIGY
Subjt:  AKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGY

Query:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        IEFQRN+ELDPEKRLYPGGK+FDPLGLA DPEKKATLQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID F
Subjt:  IEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

SwissProt top hitse value%identityAlignment
Q01667 Chlorophyll a-b binding protein 6, chloroplastic2.7e-3841.63Show/hide
Query:  WYPGAVAPEWLDGSLVGDYGFDPFGLGK-PAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALT
        W PG   P +LDGS  GD+GFDP GLG+ PA                                             L+R++E ELIH RWAMLA  G L 
Subjt:  WYPGAVAPEWLDGSLVGDYGFDPFGLGK-PAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALT

Query:  VEWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAF
         E L    W  A +   + G  ++YLG P+P+ ++ T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG + DP+K   L++ EIK+ RLA++AF
Subjt:  VEWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAF

Query:  LGFAVQAAA-TGKGPLNNWATHLSDPLHTTIID
        +GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  LGFAVQAAA-TGKGPLNNWATHLSDPLHTTIID

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic5.0e-13885.47Show/hide
Query:  MATTTNAAAAASSFIGTRL-PVAPSGSGRAQARFSFGKGKQKSPPKKSSKP--SSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLD
        MA T+ AAAAASS +GTR+ P    GSGR  A F F  GK+K+ PKKS+K   ++DRPLWYPGA++P+WLDGSLVGDYGFDPFGLGKPAEYLQF++DSLD
Subjt:  MATTTNAAAAASSFIGTRL-PVAPSGSGRAQARFSFGKGKQKSPPKKSSKP--SSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLD

Query:  QNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLV
        QNLAKN+AGDVIGTR E AD KSTPFQPYSEVFG+QRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELV+GSSYLGQPLPFSISTLIWIEVLV
Subjt:  QNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLV

Query:  IGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        IGYIEFQRNAELD EKRLYPGGK+FDPLGLAADPEK A LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  IGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

Q93WD2 Chlorophyll a-b binding protein CP295.1e-6659.11Show/hide
Query:  LWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTP--------FQPYSEVFGLQRFRECELIHGRWAM
        LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G V       A V++TP          PYSEVFGL RFRECELIHGRWAM
Subjt:  LWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTP--------FQPYSEVFGLQRFRECELIHGRWAM

Query:  LATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKA-TLQLAEIKHAR
        LA LGAL  E  TGV+W +AGKVEL +G+SY G  LPFSI+ LIWIEV+++G  EF RN+E +PEKR YPGG  FDPL LA++ E++A  L+ AEIKHAR
Subjt:  LATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKA-TLQLAEIKHAR

Query:  LAMVAFLGFAVQAAATGKGPLNNWA
        LAMV+F G+ VQA +TG+G L + A
Subjt:  LAMVAFLGFAVQAAATGKGPLNNWA

Q9S7W1 Chlorophyll a-b binding protein CP29.3, chloroplastic4.4e-11073.55Show/hide
Query:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQAR--FSFGKGKQKSPPKKSS--KPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSL
        MATTT  AAAAS   G R+     G+GR QAR  FSFGK K   PPKKS   +   DR +W+PGA  PEWLDGS++GD GFDPFGLGKPAEYLQ++ D L
Subjt:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQAR--FSFGKGKQKSPPKKSS--KPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSL

Query:  DQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVL
        DQNLAKNVAGD+IG   E++++K TPFQPY+EVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVELVEGSSYLGQPLPFS++TLIWIEVL
Subjt:  DQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVL

Query:  VIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT
        V+GYIEFQRN+ELDPEKR+YPGG YFDPLGLAADPEK  TL+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  VIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic5.4e-13283.75Show/hide
Query:  TNAAAAASSFIGTR-LPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKN
        T+ AAAASS +GTR +    S S R  ARF F  G +K+ PKK+    SDRPLW+PGA +PE+LDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKN
Subjt:  TNAAAAASSFIGTR-LPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKN

Query:  VAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEF
        + G+VIGTR E  D KSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGA+TVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSISTLIWIEVLVIGYIEF
Subjt:  VAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEF

Query:  QRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        QRNAELD EKRLYPGGK+FDPLGLA+DP KKA LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  QRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

Arabidopsis top hitse value%identityAlignment
AT2G40100.1 light harvesting complex photosystem II3.1e-11173.55Show/hide
Query:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQAR--FSFGKGKQKSPPKKSS--KPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSL
        MATTT  AAAAS   G R+     G+GR QAR  FSFGK K   PPKKS   +   DR +W+PGA  PEWLDGS++GD GFDPFGLGKPAEYLQ++ D L
Subjt:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQAR--FSFGKGKQKSPPKKSS--KPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSL

Query:  DQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVL
        DQNLAKNVAGD+IG   E++++K TPFQPY+EVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVELVEGSSYLGQPLPFS++TLIWIEVL
Subjt:  DQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVL

Query:  VIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT
        V+GYIEFQRN+ELDPEKR+YPGG YFDPLGLAADPEK  TL+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  VIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT

AT2G40100.2 light harvesting complex photosystem II7.9e-6268Show/hide
Query:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQAR--FSFGKGKQKSPPKKSS--KPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSL
        MATTT  AAAAS   G R+     G+GR QAR  FSFGK K   PPKKS   +   DR +W+PGA  PEWLDGS++GD GFDPFGLGKPAEYLQ++ D L
Subjt:  MATTTNAAAAASSFIGTRLPVAPSGSGRAQAR--FSFGKGKQKSPPKKSS--KPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSL

Query:  DQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVE
        DQNLAKNVAGD+IG   E++++K TPFQPY+EVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVE
Subjt:  DQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVE

AT3G08940.1 light harvesting complex photosystem II5.6e-6873.08Show/hide
Query:  TNAAAAASSFIGTR-LPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKN
        T+ AAAASS +GTR +    S S R  ARF F  G +K+ PKK+    SDRPLW+PGA +PE+LDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKN
Subjt:  TNAAAAASSFIGTR-LPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKN

Query:  VAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
        + G+VIGTR E  D KSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGA+TVEWLTGVTWQDAGKV  +  SS L   L F
Subjt:  VAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPF

AT3G08940.2 light harvesting complex photosystem II3.8e-13383.75Show/hide
Query:  TNAAAAASSFIGTR-LPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKN
        T+ AAAASS +GTR +    S S R  ARF F  G +K+ PKK+    SDRPLW+PGA +PE+LDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKN
Subjt:  TNAAAAASSFIGTR-LPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKN

Query:  VAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEF
        + G+VIGTR E  D KSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGA+TVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSISTLIWIEVLVIGYIEF
Subjt:  VAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEF

Query:  QRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        QRNAELD EKRLYPGGK+FDPLGLA+DP KKA LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  QRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

AT5G01530.1 light harvesting complex photosystem II3.6e-13985.47Show/hide
Query:  MATTTNAAAAASSFIGTRL-PVAPSGSGRAQARFSFGKGKQKSPPKKSSKP--SSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLD
        MA T+ AAAAASS +GTR+ P    GSGR  A F F  GK+K+ PKKS+K   ++DRPLWYPGA++P+WLDGSLVGDYGFDPFGLGKPAEYLQF++DSLD
Subjt:  MATTTNAAAAASSFIGTRL-PVAPSGSGRAQARFSFGKGKQKSPPKKSSKP--SSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLD

Query:  QNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLV
        QNLAKN+AGDVIGTR E AD KSTPFQPYSEVFG+QRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELV+GSSYLGQPLPFSISTLIWIEVLV
Subjt:  QNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLV

Query:  IGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        IGYIEFQRNAELD EKRLYPGGK+FDPLGLAADPEK A LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  IGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCACCACAAACGCCGCCGCCGCCGCATCCTCCTTCATCGGAACCCGCCTCCCCGTCGCCCCATCCGGGTCGGGTCGGGCACAGGCCCGATTCTCATTCGGAAA
AGGGAAACAAAAAAGCCCACCGAAGAAATCGTCAAAGCCCAGCTCGGACCGGCCGCTCTGGTACCCGGGGGCGGTGGCGCCGGAGTGGCTGGACGGGAGCTTGGTGGGGG
ACTATGGGTTCGACCCATTTGGGTTGGGCAAGCCAGCGGAGTACTTGCAGTTCGAATTGGACTCGCTGGACCAGAACTTGGCGAAGAATGTGGCTGGCGATGTGATTGGG
ACTCGGTTCGAGAATGCGGATGTGAAATCGACGCCGTTCCAGCCGTACAGTGAGGTTTTTGGGTTGCAGAGGTTTCGTGAGTGCGAGCTCATCCATGGAAGGTGGGCTAT
GTTGGCTACGCTTGGTGCTCTCACTGTCGAATGGCTCACCGGTGTTACCTGGCAAGACGCCGGAAAGGTAGAGCTGGTGGAAGGATCCTCATATCTTGGACAGCCACTTC
CATTCTCAATATCAACATTGATATGGATCGAAGTTCTGGTAATTGGCTACATTGAGTTTCAAAGAAACGCCGAGCTCGACCCCGAGAAGAGGCTTTACCCCGGGGGCAAG
TACTTCGATCCCCTCGGCTTGGCAGCCGATCCCGAGAAGAAGGCGACGCTTCAATTGGCCGAGATCAAGCACGCTCGTCTCGCCATGGTTGCCTTCCTCGGCTTCGCTGT
TCAGGCCGCTGCCACGGGCAAAGGCCCGCTCAATAACTGGGCAACCCATCTGAGTGACCCACTCCACACCACCATTATTGACACGTTCTTCTTTTCATCCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCACCACAAACGCCGCCGCCGCCGCATCCTCCTTCATCGGAACCCGCCTCCCCGTCGCCCCATCCGGGTCGGGTCGGGCACAGGCCCGATTCTCATTCGGAAA
AGGGAAACAAAAAAGCCCACCGAAGAAATCGTCAAAGCCCAGCTCGGACCGGCCGCTCTGGTACCCGGGGGCGGTGGCGCCGGAGTGGCTGGACGGGAGCTTGGTGGGGG
ACTATGGGTTCGACCCATTTGGGTTGGGCAAGCCAGCGGAGTACTTGCAGTTCGAATTGGACTCGCTGGACCAGAACTTGGCGAAGAATGTGGCTGGCGATGTGATTGGG
ACTCGGTTCGAGAATGCGGATGTGAAATCGACGCCGTTCCAGCCGTACAGTGAGGTTTTTGGGTTGCAGAGGTTTCGTGAGTGCGAGCTCATCCATGGAAGGTGGGCTAT
GTTGGCTACGCTTGGTGCTCTCACTGTCGAATGGCTCACCGGTGTTACCTGGCAAGACGCCGGAAAGGTAGAGCTGGTGGAAGGATCCTCATATCTTGGACAGCCACTTC
CATTCTCAATATCAACATTGATATGGATCGAAGTTCTGGTAATTGGCTACATTGAGTTTCAAAGAAACGCCGAGCTCGACCCCGAGAAGAGGCTTTACCCCGGGGGCAAG
TACTTCGATCCCCTCGGCTTGGCAGCCGATCCCGAGAAGAAGGCGACGCTTCAATTGGCCGAGATCAAGCACGCTCGTCTCGCCATGGTTGCCTTCCTCGGCTTCGCTGT
TCAGGCCGCTGCCACGGGCAAAGGCCCGCTCAATAACTGGGCAACCCATCTGAGTGACCCACTCCACACCACCATTATTGACACGTTCTTCTTTTCATCCTCTTGA
Protein sequenceShow/hide protein sequence
MATTTNAAAAASSFIGTRLPVAPSGSGRAQARFSFGKGKQKSPPKKSSKPSSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIG
TRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK
YFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFFFSSS