CuGenDBv2

Gene ID	Spg033340
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ras-related protein RABE1a-like
Genome location	scaffold5:2175565..2178122
RNA-Seq Expression	Spg033340
Synteny	Spg033340
Gene Ontology terms	GO:0006904 - vesicle docking involved in exocytosis (biological process) GO:0009306 - protein secretion (biological process) GO:0017157 - regulation of exocytosis (biological process) GO:0003925 - G protein activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR001806 - Small GTPase IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596425.1 Ras-related protein RABE1a, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-60

97.66

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRL+DSDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ +NGAGASQTAQKSACCGS
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

XP_004137781.1 ras-related protein RABE1a [Cucumis sativus]

8.0e-61

97.66

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRL+DSDSK+
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ DNGAGASQTAQKSACCGS
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

XP_022145617.1 ras-related protein RABE1a [Momordica charantia]

6.1e-61

98.44

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ DNGAGASQ AQKSACCGS
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

XP_022934603.1 ras-related protein RABE1a-like [Cucurbita moschata]

3.6e-61

98.44

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRL+DSDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ DNGAGASQTAQKSACCGS
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

XP_038904986.1 ras-related protein RABE1a-like [Benincasa hispida]

2.1e-61

98.44

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRA+PTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ DNGAGASQTAQKSACCGS
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LA80 Uncharacterized protein

3.9e-61

97.66

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRL+DSDSK+
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ DNGAGASQTAQKSACCGS
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

A0A5A7TLI2 Ras-related protein RABE1c-like

8.6e-61

97.66

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRL+DSDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ DN AGASQTAQKSACCGS
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

A0A6J1CX48 ras-related protein RABE1a

3.0e-61

98.44

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ DNGAGASQ AQKSACCGS
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

A0A6J1F847 ras-related protein RABE1a-like

1.7e-61

98.44

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRL+DSDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ DNGAGASQTAQKSACCGS
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

A0A6J1KYN0 ras-related protein RABE1a-like

1.7e-61

98.44

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRL+DSDSKA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ DNGAGASQTAQKSACCGS
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

SwissProt top hits

e value

%identity

Alignment

O24466 Ras-related protein RABE1a

3.5e-59

90.62

Show/hide

Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFSIAKDIKQRLAD+D++A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ D GAG SQ  QKSACCG+
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

P28186 Ras-related protein RABE1c

1.9e-57

88.28

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI +DIKQRL+D+DS+A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EP TIKI+Q D  AGA Q  QKSACCG+
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

Q39433 Ras-related protein RAB1BV

1.6e-51

84.5

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSIA+DIKQRLADSD++ 
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQ-TIKINQGDNGAGASQTAQKSACCGS
        E Q +I I   D     +Q A KSACCGS
Subjt:  EPQ-TIKINQGDNGAGASQTAQKSACCGS

Q9LZD4 Ras-related protein RABE1d

1.1e-52

84.92

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNW++NIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE VF SIAKDIKQRL ++D+KA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACC
        EPQ IKI + D  A +S TA+KSACC
Subjt:  EPQTIKINQGDNGAGASQTAQKSACC

Q9SF91 Ras-related protein RABE1e

5.4e-52

84.25

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNW++NIEQHASD+VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN NVE+VF SIAKDIKQRL +SD+KA
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGD-NGAGASQTAQKSACC
        EPQ IKI + D N A +S T +KSACC
Subjt:  EPQTIKINQGD-NGAGASQTAQKSACC

Arabidopsis top hits

e value

%identity

Alignment

AT3G46060.1 RAB GTPase homolog 8A

1.4e-58

88.28

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI +DIKQRL+D+DS+A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EP TIKI+Q D  AGA Q  QKSACCG+
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

AT3G53610.1 RAB GTPase homolog 8

2.5e-60

90.62

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFSIAKDIKQRLAD+D++A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ D GAG SQ  QKSACCG+
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

AT3G53610.2 RAB GTPase homolog 8

2.5e-60

90.62

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFSIAKDIKQRLAD+D++A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ D GAG SQ  QKSACCG+
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

AT3G53610.3 RAB GTPase homolog 8

2.5e-60

90.62

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFSIAKDIKQRLAD+D++A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EPQTIKINQ D GAG SQ  QKSACCG+
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

AT5G59840.1 Ras-related small GTP-binding family protein

9.4e-60

91.41

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Query:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA
        MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAD+DS+A
Subjt:  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKA

Query:  EPQTIKINQGDNGAGASQTAQKSACCGS
        EP TIKI+Q D  AGA Q  QKSACCGS
Subjt:  EPQTIKINQGDNGAGASQTAQKSACCGS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTATTTTGCTAGTTTACGATGTCACGGATGAGTCATCATTTAACAACATTAGGAATTGGATTCGTAACATTGAACAACATGCTTCTGACAATGTCAACAAGATACT
GGTGGGTAACAAGGCTGATATGGATGAGAGCAAAAGGGCCGTTCCTACATCAAAAGGTCAAGCTCTCGCAGATGAGTATGGCATCAAGTTTTTTGAGACTAGTGCAAAGA
CAAATTTGAACGTGGAAGAAGTTTTTTTCTCCATAGCTAAGGATATTAAACAAAGGCTTGCAGACAGCGACTCCAAGGCTGAGCCTCAAACAATCAAGATAAACCAAGGA
GATAATGGAGCAGGGGCTTCCCAAACTGCTCAAAAGTCGGCTTGTTGTGGATCTTAA

mRNA sequence

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Protein sequence

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MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADSDSKAEPQTIKINQG
DNGAGASQTAQKSACCGS

Spg033340 (gene) of Sponge gourd (cylindrica) v1 genome