CuGenDBv2

Gene ID	Spg033370
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Iron-sulphur cluster biosynthesis family protein
Genome location	scaffold5:4320432..4323908
RNA-Seq Expression	Spg033370
Synteny	Spg033370
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR044200 - Uncharacterized protein At5g03900-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022144706.1 uncharacterized protein At5g03900, chloroplastic isoform X1 [Momordica charantia]

1.3e-97

96.37

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
        GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGG+EKFFKEKKWVFSKT+ SERAMAIGLGGLNLFGVI+LG MLKDVA+KPSGLIKFVSDIFPLLQIY
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY

Query:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
        AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQ+YELQEWERKFREIEKSD
Subjt:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

XP_022925696.1 uncharacterized protein At5g03900-like [Cucurbita moschata]

9.1e-99

98.45

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
        GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEK+WVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY

Query:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
        AGSFF IPLVRWFI QKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
Subjt:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

XP_023005813.1 uncharacterized protein At5g03900, chloroplastic-like [Cucurbita maxima]

2.0e-98

98.45

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
        GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY

Query:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
        AGSFF IPLVRWFI QKRNAEIGKRNQARQK AQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
Subjt:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

XP_023540361.1 LOW QUALITY PROTEIN: uncharacterized protein At5g03900, chloroplastic-like [Cucurbita pepo subsp. pepo]

1.2e-98

98.45

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
        GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIE FFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY

Query:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
        AGSFF IPLVRWFI QKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
Subjt:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

XP_038904835.1 uncharacterized protein At5g03900, chloroplastic isoform X1 [Benincasa hispida]

1.5e-98

97.93

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
        GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGG+EKFFKEKKWVFSKTS SERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY

Query:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
        AGSFFTIPLVRWFIIQKRNAEIGKRN+ARQKRAQALELPDV+LRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
Subjt:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LE13 Uncharacterized protein

8.3e-98

96.89

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
        GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEK FKEKKWVFSKTS SERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY

Query:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
        AGSFFTIPLVRWFI+QKRNAEIGKRN+ARQKRAQALELPDV+LRRKLLSARDMAQ+TVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
Subjt:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

A0A1S3B7F8 uncharacterized protein At5g03900, chloroplastic

3.1e-97

96.89

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
        GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTS SERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY

Query:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
        AGSFFTIPLVRWFIIQKRNAEIGKRN+ARQKRAQALELPDV+LRRKLLSARDMAQ+TVI  DRIVYSTDRDLIEQNYELQEWERKFREIEKSD
Subjt:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

A0A6J1CU13 uncharacterized protein At5g03900, chloroplastic isoform X1

6.3e-98

96.37

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
        GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGG+EKFFKEKKWVFSKT+ SERAMAIGLGGLNLFGVI+LG MLKDVA+KPSGLIKFVSDIFPLLQIY
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY

Query:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
        AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQ+YELQEWERKFREIEKSD
Subjt:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

A0A6J1ECX3 uncharacterized protein At5g03900-like

4.4e-99

98.45

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
        GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEK+WVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY

Query:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
        AGSFF IPLVRWFI QKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
Subjt:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

A0A6J1L381 uncharacterized protein At5g03900, chloroplastic-like

9.8e-99

98.45

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
        GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY

Query:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
        AGSFF IPLVRWFI QKRNAEIGKRNQARQK AQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
Subjt:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

SwissProt top hits

e value

%identity

Alignment

Q8GW20 Uncharacterized protein At5g03900, chloroplastic

8.3e-71

69.95

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
        GNILY FPSLQRTAS   S RKEYVG KW DWV  +EKFFKEKKW FSKTS SERA+ IGLG +NLFGVIVL  +L +++V+P G + FV +I+PLLQIY
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY

Query:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
        AGSFFTIPL+RWF I+++N +I  RN+AR + A+ALE PD++LRRKLLSARDMAQ+TVIG+DRIVYSTDRD++EQNYE  EW+R+F+E+EKSD
Subjt:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

Arabidopsis top hits

e value

%identity

Alignment

AT5G03900.1 Iron-sulphur cluster biosynthesis family protein

6.6e-31

67.68

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQI
        GNILY FPSLQRTAS   S RKEYVG KW DWV  +EKFFKEKKW FSKTS SERA+ IGLG +NLFGVIVL  +L +++V+P G + FV +I+PLLQ+
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQI

AT5G03900.2 Iron-sulphur cluster biosynthesis family protein

5.9e-72

69.95

Show/hide

Query:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY
        GNILY FPSLQRTAS   S RKEYVG KW DWV  +EKFFKEKKW FSKTS SERA+ IGLG +NLFGVIVL  +L +++V+P G + FV +I+PLLQIY
Subjt:  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIY

Query:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
        AGSFFTIPL+RWF I+++N +I  RN+AR + A+ALE PD++LRRKLLSARDMAQ+TVIG+DRIVYSTDRD++EQNYE  EW+R+F+E+EKSD
Subjt:  AGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATCCCAGAAGGCTGTGGCGAATACACAGCTGCTGAAAAGGTGAATTTGTGTCTCGCTAGCCCTGTTACACATGCTGCAGCAGTTGGGGGAGAGAGAGGACTCGGGAT
TTCTTCTCTGAATGATGTCAGCGGTGTTGATACAAGCATGGCTGAGCTCCCATATGAAGAACTTAACTTTTTTAGGCATAGGACCTTTCCACAATTGGCTCTAGAAATCT
CTGCTGGAAATATTCTATATCGATTTCCTTCCCTACAGCGCACAGCTTCTTCTCAGCGGAGTGGAAGGAAGGAGTATGTGGGCAGAAAATGGGCCGACTGGGTTGGAGGG
ATTGAAAAATTTTTCAAAGAAAAGAAATGGGTCTTTAGTAAAACAAGTTATTCGGAGAGAGCAATGGCCATTGGATTGGGAGGGCTTAATCTGTTTGGTGTTATAGTCCT
CGGAGCCATGTTGAAGGATGTTGCTGTTAAACCAAGTGGACTCATCAAATTTGTATCGGATATATTTCCTCTACTGCAGATATATGCGGGTTCTTTCTTCACAATTCCAT
TGGTCCGGTGGTTCATTATCCAGAAGAGAAATGCTGAAATAGGAAAAAGAAACCAAGCAAGGCAAAAGCGTGCCCAGGCCCTTGAATTGCCAGATGTGTCACTCAGGCGC
AAGCTCCTCAGTGCTCGAGACATGGCCCAAAGAACTGTAATTGGTCAGGATCGAATTGTATATAGTACTGATCGAGACTTAATTGAGCAAAATTATGAGCTCCAAGAATG
GGAAAGGAAGTTCCGAGAGATAGAAAAGTCAGATTAG

mRNA sequence

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Protein sequence

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MIPEGCGEYTAAEKVNLCLASPVTHAAAVGGERGLGISSLNDVSGVDTSMAELPYEELNFFRHRTFPQLALEISAGNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGG
IEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRR
KLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD

Spg033370 (gene) of Sponge gourd (cylindrica) v1 genome