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Spg033390 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033390
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPhycobilisome rod-core linker polypeptide CpcG2 like
Genome locationscaffold5:918395..921870
RNA-Seq ExpressionSpg033390
SyntenySpg033390
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145531.1 uncharacterized protein LOC111014959 [Momordica charantia]1.8e-2592.96Show/hide
Query:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
        MAGGNF++RVVSYLVNELLVDSLANSR+FQRFAVRTSKQ+EDISNKAAQKKQEL EQVKDLSKNFESFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
XP_022935686.1 uncharacterized protein LOC111442470 [Cucurbita moschata]2.3e-2591.55Show/hide
Query:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LV+SLANSR FQRFAVRTSKQ+EDISNKAAQKKQEL EQVKDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
XP_022983627.1 uncharacterized protein LOC111482182 [Cucurbita maxima]6.7e-2590.14Show/hide
Query:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LV+SLANSR FQRFAVRTSKQ+EDISNKAA+KKQEL EQVKDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
XP_023527736.1 uncharacterized protein LOC111790863 [Cucurbita pepo subsp. pepo]2.3e-2590.14Show/hide
Query:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE++V+SLANSRTFQRFAVRTSKQ+EDISNKA+QKKQEL EQVKDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
XP_038903248.1 uncharacterized protein LOC120089892 [Benincasa hispida]1.8e-2591.55Show/hide
Query:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LV+SLANSRTFQRFAVRTSKQ+E+ISNKAAQKKQEL EQVKDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
TrEMBL top hitse value%identityAlignment
A0A6J1CWK8 uncharacterized protein LOC1110149598.5e-2692.96Show/hide
Query:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
        MAGGNF++RVVSYLVNELLVDSLANSR+FQRFAVRTSKQ+EDISNKAAQKKQEL EQVKDLSKNFESFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
A0A6J1F5E7 uncharacterized protein LOC1114424701.1e-2591.55Show/hide
Query:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LV+SLANSR FQRFAVRTSKQ+EDISNKAAQKKQEL EQVKDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
A0A6J1GCB5 uncharacterized protein LOC1114528484.2e-2590.14Show/hide
Query:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LV+SLANSR+FQRFAVRTSKQ+EDIS KAAQKKQEL EQ+KDLSKNFESFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
A0A6J1I5H8 uncharacterized protein LOC1114701024.2e-2590.14Show/hide
Query:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LV+SLANSR+FQRFAVRTSKQ+EDIS KAAQKKQEL EQ+KDLSKNFESFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
A0A6J1IZW4 uncharacterized protein LOC1114821823.2e-2590.14Show/hide
Query:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNE+LV+SLANSR FQRFAVRTSKQ+EDISNKAA+KKQEL EQVKDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01350.1 unknown protein4.3e-1450.75Show/hide
Query:  GGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFK
        GGNF+ RV+SY+ NE +V+ LANS  FQRFAVRTSK++E++S  AA+ ++++ +Q+++ +KN +S K
Subjt:  GGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTGGAAATTTCATGCACAGAGTAGTTTCTTACCTCGTGAATGAGCTTCTCGTCGACAGTCTTGCGAACAGCCGTACATTCCAAAGGTTCGCTGTGAGGACATC
AAAACAACTTGAGGATATATCTAACAAGGCTGCGCAGAAGAAGCAAGAACTTACCGAACAGGTGAAAGATCTCTCCAAAAATTTTGAGTCCTTCAAGAACCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGTGGAAATTTCATGCACAGAGTAGTTTCTTACCTCGTGAATGAGCTTCTCGTCGACAGTCTTGCGAACAGCCGTACATTCCAAAGGTTCGCTGTGAGGACATC
AAAACAACTTGAGGATATATCTAACAAGGCTGCGCAGAAGAAGCAAGAACTTACCGAACAGGTGAAAGATCTCTCCAAAAATTTTGAGTCCTTCAAGAACCAATAA
Protein sequenceShow/hide protein sequence
MAGGNFMHRVVSYLVNELLVDSLANSRTFQRFAVRTSKQLEDISNKAAQKKQELTEQVKDLSKNFESFKNQ