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Spg033431 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033431
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionKH domain-containing protein
Genome locationscaffold5:452883..453621
RNA-Seq ExpressionSpg033431
SyntenySpg033431
Gene Ontology termsGO:0048024 - regulation of mRNA splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR032377 - STAR protein, homodimerisation region
IPR045071 - KH domain-containing BBP-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5561840.1 hypothetical protein DKX38_006797 [Salix brachista]3.1e-2191.53Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV
        MSGLYNPNFSPARAASPQIRS+ D DSQYLSELLAEHQKLGPFMQILPICSRLLNQG++
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV

XP_004137670.3 KH domain-containing protein At3g08620 [Cucumis sativus]4.1e-2191.53Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV
        MSGLYNPNFSPARAASPQIR+S DADSQYLSELLAEHQKLGPFMQILPICSRLLNQ ++
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV

XP_022157317.1 KH domain-containing protein At3g08620-like [Momordica charantia]6.3e-2294.92Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV
        MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQ ++
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV

XP_022941600.1 KH domain-containing protein At2g38610 [Cucurbita moschata]4.1e-2191.53Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV
        MSGLYNPNFSPARAASPQIR+SADADSQYLSELLAEHQKLGPFMQILPIC RLLNQ ++
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV

XP_038905002.1 KH domain-containing protein At3g08620-like isoform X1 [Benincasa hispida]1.8e-2193.22Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV
        MSGLYNPNFSPARAASPQIRSS DADSQYLSELLAEHQKLGPFMQILPICSRLLNQ ++
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV

TrEMBL top hitse value%identityAlignment
A0A5N5N2R6 KH domain-containing protein1.5e-2191.53Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV
        MSGLYNPNFSPARAASPQIRS+ D DSQYLSELLAEHQKLGPFMQILPICSRLLNQG++
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV

A0A6J1DU72 KH domain-containing protein At3g08620-like3.0e-2294.92Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV
        MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQ ++
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV

A0A6J1FU50 KH domain-containing protein At2g386102.0e-2191.53Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV
        MSGLYNPNFSPARAASPQIR+SADADSQYLSELLAEHQKLGPFMQILPIC RLLNQ ++
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV

A0A6J1I3I7 KH domain-containing protein At2g38610-like2.0e-2191.53Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV
        MSGLYNPNFSPARAASPQIR+SADADSQYLSELLAEHQKLGPFMQILPIC RLLNQ ++
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV

A0A6N2KL60 STAR_dimer domain-containing protein1.5e-2188.14Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV
        MSGLYNPNFSPARAASPQIRS+ D DSQYLSELLAEHQKLGPFMQ+LP+CSRLLNQG++
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV

SwissProt top hitse value%identityAlignment
Q75GR5 KH domain-containing protein SPIN13.3e-1875Show/hide
Query:  MSGLYNPNFSPARAASPQIRSS-ADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV
        MSGLY+P FSPAR  SPQIRS+  D DSQYL+ELLAEHQKLGPFMQ+LPICS+LL+Q ++
Subjt:  MSGLYNPNFSPARAASPQIRSS-ADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVV

Q8GWR3 KH domain-containing protein At1g09660/At1g096702.1e-0451.11Show/hide
Query:  ASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        ASP       +D  +YL+ELL E QKLGPF+Q++P C RLLN  +
Subjt:  ASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQGV

Q8GYR4 KH domain-containing protein At3g086201.1e-1880Show/hide
Query:  MSGLYN-PNFSPARAASPQIRS-SADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYN  NFSP+RAASPQIR+ S+D DSQY+S+LLAEHQKLGPFMQ+LPICSRLLNQ +
Subjt:  MSGLYN-PNFSPARAASPQIRS-SADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

Q9ZVI3 KH domain-containing protein At2g386101.1e-1679.66Show/hide
Query:  MSGLYNPN--FSPARAASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQ
        MSGLYN +  FSPARAASPQIRS+ + D SQYL+ELLAEHQKL PFMQ+LPICSRLLNQ
Subjt:  MSGLYNPN--FSPARAASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQ

Arabidopsis top hitse value%identityAlignment
AT1G09660.1 RNA-binding KH domain-containing protein1.5e-0551.11Show/hide
Query:  ASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        ASP       +D  +YL+ELL E QKLGPF+Q++P C RLLN  +
Subjt:  ASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQGV

AT1G09660.2 RNA-binding KH domain-containing protein1.5e-0551.11Show/hide
Query:  ASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        ASP       +D  +YL+ELL E QKLGPF+Q++P C RLLN  +
Subjt:  ASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQGV

AT2G38610.1 RNA-binding KH domain-containing protein7.6e-1879.66Show/hide
Query:  MSGLYNPN--FSPARAASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQ
        MSGLYN +  FSPARAASPQIRS+ + D SQYL+ELLAEHQKL PFMQ+LPICSRLLNQ
Subjt:  MSGLYNPN--FSPARAASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQ

AT2G38610.2 RNA-binding KH domain-containing protein7.6e-1879.66Show/hide
Query:  MSGLYNPN--FSPARAASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQ
        MSGLYN +  FSPARAASPQIRS+ + D SQYL+ELLAEHQKL PFMQ+LPICSRLLNQ
Subjt:  MSGLYNPN--FSPARAASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQ

AT3G08620.1 RNA-binding KH domain-containing protein8.2e-2080Show/hide
Query:  MSGLYN-PNFSPARAASPQIRS-SADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYN  NFSP+RAASPQIR+ S+D DSQY+S+LLAEHQKLGPFMQ+LPICSRLLNQ +
Subjt:  MSGLYN-PNFSPARAASPQIRS-SADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGTTTGTATAATCCCAACTTCTCTCCTGCAAGGGCTGCTTCTCCTCAGATTAGAAGCTCCGCTGATGCTGACAGCCAGTACTTGTCGGAGCTGTTGGCCGAGCA
TCAAAAACTCGGACCCTTCATGCAAATCCTTCCTATTTGCAGCCGACTTTTAAATCAAGGTGTAGTTTTCATTTTCCCTGCTTTCAGAATTTTCTTTTGTCTTTGGAACT
CCACTCTCTCATCGCAACTACACTTGCCTATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGTTTGTATAATCCCAACTTCTCTCCTGCAAGGGCTGCTTCTCCTCAGATTAGAAGCTCCGCTGATGCTGACAGCCAGTACTTGTCGGAGCTGTTGGCCGAGCA
TCAAAAACTCGGACCCTTCATGCAAATCCTTCCTATTTGCAGCCGACTTTTAAATCAAGGTGTAGTTTTCATTTTCCCTGCTTTCAGAATTTTCTTTTGTCTTTGGAACT
CCACTCTCTCATCGCAACTACACTTGCCTATTTAG
Protein sequenceShow/hide protein sequence
MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGVVFIFPAFRIFFCLWNSTLSSQLHLPI