CuGenDBv2

Gene ID	Spg033476
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	40S ribosomal protein S17-like
Genome location	scaffold5:4849978..4850638
RNA-Seq Expression	Spg033476
Synteny	Spg033476
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0015074 - DNA integration (biological process) GO:0005840 - ribosome (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001210 - Ribosomal protein S17e IPR036401 - Ribosomal protein S17e-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8651099.1 hypothetical protein Csa_001438 [Cucumis sativus]

3.2e-66

95.07

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGRSDAGF
        ETLDMLS LGMNDIPGLVQVDPTVPQQVGFGL GRGRS   F
Subjt:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGRSDAGF

XP_004136500.1 40S ribosomal protein S17 [Cucumis sativus]

1.6e-65

97.08

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR
        ETLDMLS LGMNDIPGLVQVDPTVPQQVGFGL GRGR
Subjt:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR

XP_008442886.1 PREDICTED: 40S ribosomal protein S17-like [Cucumis melo]

9.3e-66

97.81

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR
        ETLDMLS LGMNDIPGLVQVDPTVPQQVGFGL GRGR
Subjt:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR

XP_022144698.1 40S ribosomal protein S17-like [Momordica charantia]

3.0e-64

96.32

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRG
        ETLDMLS LGMNDIPGLVQVDP+VPQQVGFGL GRG
Subjt:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRG

XP_038904935.1 40S ribosomal protein S17-like [Benincasa hispida]

3.5e-65

95.62

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD+SA+KT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR
        ETLDMLS LGMNDIPGLVQVDPTVPQQVGFGL GRGR
Subjt:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LB02 40S ribosomal protein S17

7.7e-66

97.08

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR
        ETLDMLS LGMNDIPGLVQVDPTVPQQVGFGL GRGR
Subjt:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR

A0A1S3B6R7 40S ribosomal protein S17-like

4.5e-66

97.81

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR
        ETLDMLS LGMNDIPGLVQVDPTVPQQVGFGL GRGR
Subjt:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR

A0A5A7TQK2 40S ribosomal protein S17-like

4.5e-66

97.81

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR
        ETLDMLS LGMNDIPGLVQVDPTVPQQVGFGL GRGR
Subjt:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR

A0A6J1CU03 40S ribosomal protein S17-like

1.4e-64

96.32

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRG
        ETLDMLS LGMNDIPGLVQVDP+VPQQVGFGL GRG
Subjt:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRG

A0A6J1FC93 40S ribosomal protein S17-like

9.4e-64

94.16

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVD+
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR
        ETLDMLS LGM DIPG+VQVDPTVPQQV FGL GRGR
Subjt:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGR

SwissProt top hits

e value

%identity

Alignment

P49205 40S ribosomal protein S17-1

4.2e-53

87.7

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDP
        ETL+ML++LGM+D  G+  VDP
Subjt:  ETLDMLSTLGMNDIPGLVQVDP

P49215 40S ribosomal protein S17

2.0e-55

82.39

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT+ IEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGRSDAGF
        ETLDMLS LGM+D+PG+V+     PQ V   L   GR   GF
Subjt:  ETLDMLSTLGMNDIPGLVQVDPTVPQQVGFGLAGRGRSDAGF

Q9LZ17 40S ribosomal protein S17-4

8.5e-54

87.7

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSTLGMNDIPGLVQVDP

Q9SJ36 40S ribosomal protein S17-2

7.2e-53

86.89

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDP
        ETL+ML++LGM+D  G+  V+P
Subjt:  ETLDMLSTLGMNDIPGLVQVDP

Q9SQZ1 40S ribosomal protein S17-3

2.7e-52

86.78

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIK + ++VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVD
        ETL+ML++LGM+DI G+ QV+
Subjt:  ETLDMLSTLGMNDIPGLVQVD

Arabidopsis top hits

e value

%identity

Alignment

AT2G04390.1 Ribosomal S17 family protein

3.0e-54

87.7

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDP
        ETL+ML++LGM+D  G+  VDP
Subjt:  ETLDMLSTLGMNDIPGLVQVDP

AT5G04800.1 Ribosomal S17 family protein

6.0e-55

87.7

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSTLGMNDIPGLVQVDP

AT5G04800.2 Ribosomal S17 family protein

6.0e-55

87.7

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSTLGMNDIPGLVQVDP

AT5G04800.3 Ribosomal S17 family protein

6.0e-55

87.7

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSTLGMNDIPGLVQVDP

AT5G04800.4 Ribosomal S17 family protein

6.0e-55

87.7

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRL+NKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSTLGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSTLGMNDIPGLVQVDP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGCGCGTTCGCACCAAAACAGTGAAGAAATCTTCCCGTCAAGTCATCGAGCGCTACTACTCGCGCATGACCCTCGACTTCCATACGAACAAGAAGATCCTCGAAGA
GGTCGCCATTATCCCTTCCAAGAGACTGCAAAACAAGATCGCCGGATTCTCCACTCATCTCATGAAGCGGATCCAGAAGGGACCGGTTCGCGGCATCTCTCTGAAGCTTC
AAGAGGAAGAGCGCGAGCGCCGCATGGACTTCGTTCCCGACGTATCCGCCATTAAAACCGAACAAATCGAGGTCGACAAGGAGACTCTCGATATGCTTTCTACTCTTGGA
ATGAACGATATTCCGGGGCTTGTTCAGGTCGATCCGACTGTGCCGCAGCAGGTTGGATTTGGATTGGCCGGTCGCGGTAGGAGTGATGCTGGTTTCTGGGCTTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLQNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDKETLDMLSTLG
MNDIPGLVQVDPTVPQQVGFGLAGRGRSDAGFWA

Spg033476 (gene) of Sponge gourd (cylindrica) v1 genome