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Spg033493 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033493
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold5:3912023..3918164
RNA-Seq ExpressionSpg033493
SyntenySpg033493
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATTTTGGACCACCTCGATGTACAAGGAGCTGACGAGGACAACCGGGAAAAAATTGGGCTGGGGGATGGACCCAAGAGGCAAAACCGACAAGTGGGACGGGCCAA
GACTGAAGGGGTTGGGCTTTTGGCCCGACCCCCTGCTCAGCCTCGGTCCAAGGCCCAGGCCGAGGCTCATGGTCGGCAGGCCTGGGCCGAGGTCGAGCCTGTCCGGCTCC
GTTTGGTCCCTTTCGCCTCTGGCCGCCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGGCGGTGTGGCT
AGCACCACATCGGTGTGCAGGTTTACTCTTTTGCAGGCCACGTCTTCCCCCACTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGCAAGGCTGCATTGGGAA
AGGTGATTTCTACCAACTGTTCTATCTTGACAATAGTCTCGACACGTGGAAACATGGAAACACGTTGGGAGGGCCTTTGCCGATGCATAATCTGATTTCTACCAATGTTT
ATGTGCACCAGAAAAAGGGAGCAATGGAGAGCCATGGATTATTGGGAGTTTATGACCAACCAGTGGAGCAAATTAAAGAAGAGCTATCCAAAGCAGCCTTATTGATGTGG
GTTCTATGGAATACGCGCAATAAAAGCAGAATTAGTCGTGGCATACCTGACATTGAGAGCATCAATAGGTCGATGAGGCCTCAAAAAGCATCTGGAAGCAGCAGCGTTGA
AGAGCCCGATGAGTCACCCTTCTTGGAGGCCACCGGATCTTGCTGCAAGCAAGTTTCTCGATCTTGGTCAGTTAAAGCCCTTGAAGGCGAGGCTTTGTTAGAAGGAGTGA
GAGCGTACCTGAATTGGGTCGATGCTGGCAATCTCACCCTCCCCCTGGCCGCTGAATCGGACTCCTTAGGCATCATCAAGGCGGTTGCAGGCGAGGAGGAAGATTTTTCG
GAAGTGGGTTTGATTATTGACTCCATTGTCTGTTTGTCGAAGGATAAATCCATTTCTTTCTCTTTTTGTAATAGGAACTGCAATACTTTGGCCCATCAAGTTGCTCTTGC
AGCAGCAAAATATGGGAGTTGCTCTGTTTTTTTTTTTTGTCATGCATTTTCCTGTACGTGGGAAGATGTGGTGCGGATGAGGGATGAGGATATCCCTCAATGGTTCATTA
ATTCTTTTGCTGATGTAGTTGGTGGTTGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATTTTGGACCACCTCGATGTACAAGGAGCTGACGAGGACAACCGGGAAAAAATTGGGCTGGGGGATGGACCCAAGAGGCAAAACCGACAAGTGGGACGGGCCAA
GACTGAAGGGGTTGGGCTTTTGGCCCGACCCCCTGCTCAGCCTCGGTCCAAGGCCCAGGCCGAGGCTCATGGTCGGCAGGCCTGGGCCGAGGTCGAGCCTGTCCGGCTCC
GTTTGGTCCCTTTCGCCTCTGGCCGCCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGGCGGTGTGGCT
AGCACCACATCGGTGTGCAGGTTTACTCTTTTGCAGGCCACGTCTTCCCCCACTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGCAAGGCTGCATTGGGAA
AGGTGATTTCTACCAACTGTTCTATCTTGACAATAGTCTCGACACGTGGAAACATGGAAACACGTTGGGAGGGCCTTTGCCGATGCATAATCTGATTTCTACCAATGTTT
ATGTGCACCAGAAAAAGGGAGCAATGGAGAGCCATGGATTATTGGGAGTTTATGACCAACCAGTGGAGCAAATTAAAGAAGAGCTATCCAAAGCAGCCTTATTGATGTGG
GTTCTATGGAATACGCGCAATAAAAGCAGAATTAGTCGTGGCATACCTGACATTGAGAGCATCAATAGGTCGATGAGGCCTCAAAAAGCATCTGGAAGCAGCAGCGTTGA
AGAGCCCGATGAGTCACCCTTCTTGGAGGCCACCGGATCTTGCTGCAAGCAAGTTTCTCGATCTTGGTCAGTTAAAGCCCTTGAAGGCGAGGCTTTGTTAGAAGGAGTGA
GAGCGTACCTGAATTGGGTCGATGCTGGCAATCTCACCCTCCCCCTGGCCGCTGAATCGGACTCCTTAGGCATCATCAAGGCGGTTGCAGGCGAGGAGGAAGATTTTTCG
GAAGTGGGTTTGATTATTGACTCCATTGTCTGTTTGTCGAAGGATAAATCCATTTCTTTCTCTTTTTGTAATAGGAACTGCAATACTTTGGCCCATCAAGTTGCTCTTGC
AGCAGCAAAATATGGGAGTTGCTCTGTTTTTTTTTTTTGTCATGCATTTTCCTGTACGTGGGAAGATGTGGTGCGGATGAGGGATGAGGATATCCCTCAATGGTTCATTA
ATTCTTTTGCTGATGTAGTTGGTGGTTGTGTTTAA
Protein sequenceShow/hide protein sequence
MAILDHLDVQGADEDNREKIGLGDGPKRQNRQVGRAKTEGVGLLARPPAQPRSKAQAEAHGRQAWAEVEPVRLRLVPFASGRPGFAWFVPKRLRIPKNPRSMSSIGGGVA
STTSVCRFTLLQATSSPTLKQIHCRLSRGAKQGCIGKGDFYQLFYLDNSLDTWKHGNTLGGPLPMHNLISTNVYVHQKKGAMESHGLLGVYDQPVEQIKEELSKAALLMW
VLWNTRNKSRISRGIPDIESINRSMRPQKASGSSSVEEPDESPFLEATGSCCKQVSRSWSVKALEGEALLEGVRAYLNWVDAGNLTLPLAAESDSLGIIKAVAGEEEDFS
EVGLIIDSIVCLSKDKSISFSFCNRNCNTLAHQVALAAAKYGSCSVFFFCHAFSCTWEDVVRMRDEDIPQWFINSFADVVGGCV