CuGenDBv2

Gene ID	Spg033567
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA-directed DNA polymerase, family B, conserved site
Genome location	scaffold5:5038023..5038562
RNA-Seq Expression	Spg033567
Synteny	Spg033567
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596606.1 hypothetical protein SDJN03_09786, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-50

65.75

Show/hide

Query:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDD---PEAAAIDDELEKWRELCGPSRTLFT
        MDG LNKIATALI++FAI+FLLLLAQILFFFSR R HH    +P++ C YLF WR ++RIEP EIASK+HDD   PE AA+D ELEKWR LCGP+R LFT
Subjt:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDD---PEAAAIDDELEKWRELCGPSRTLFT

Query:  I-NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS
        I  EE+ER+GIES E D K           D DT PF+TPCGSPPFF  SPSPTRDAGDF V+KDSSD +    FLAIEI+
Subjt:  I-NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS

KAG7028145.1 hypothetical protein SDJN02_09325, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.1e-51

66.3

Show/hide

Query:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDD---PEAAAIDDELEKWRELCGPSRTLFT
        MDG LNKIATALI++FAI+FLLLLAQILFFFSR R HH    +P++ C YLF WR ++RIEP EIASK+HDD   PE AA+D ELEKWR LCGPSR LFT
Subjt:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDD---PEAAAIDDELEKWRELCGPSRTLFT

Query:  I-NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS
        I  EE+ER+GIES E D K           D DT PF+TPCGSPPFF  SPSPTRDAGDF V+KDSSD +    FLAIEI+
Subjt:  I-NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS

XP_022943016.1 uncharacterized protein LOC111447877 [Cucurbita moschata]

6.1e-51

66.3

Show/hide

Query:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDD---PEAAAIDDELEKWRELCGPSRTLFT
        MDG LNKIATALI++FAI+FLLLLAQILFFFSR R HH    +P++ C YLF WR ++RIEP EIASK++DD   PE AA+D ELEKWR LCGPSR LFT
Subjt:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDD---PEAAAIDDELEKWRELCGPSRTLFT

Query:  I-NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS
        I  EE+ER+GIES E D K           D DT PFHTPCGSPPFF  SPSPTRDAGDF V+KDSSD +    FLAIEI+
Subjt:  I-NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS

XP_023005969.1 uncharacterized protein LOC111498829 [Cucurbita maxima]

5.6e-52

65.19

Show/hide

Query:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDD---PEAAAIDDELEKWRELCGPSRTLFT
        MDG L KIATALI++FAI+FLLLLAQILFFFSR R HH    +P++ C YLFCWR ++RIEP EIASK+HDD    E AA+D ELEKWR LCGPSR LFT
Subjt:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDD---PEAAAIDDELEKWRELCGPSRTLFT

Query:  I-NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS
        I  EE+ER+G+ES E DPK           D DT PF+TPCGSPPFFT  PSPT DA DF V+KDS D + TA FLAIEI+
Subjt:  I-NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS

XP_038905411.1 uncharacterized protein LOC120091450 [Benincasa hispida]

9.8e-49

60.73

Show/hide

Query:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCW-RNQSRIEPKEIA--SKIHDD-------PEAAAIDDELEKWRELCG
        MDG LNK ATA+IAVF ++FLLL+AQIL+F SRRR       EP EKCFY+FCW RNQSRIEPKE+   SK++ D        E AA+D+ELEKW+ELCG
Subjt:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCW-RNQSRIEPKEIA--SKIHDD-------PEAAAIDDELEKWRELCG

Query:  PSRTLFTI-NEEDERDG-IESFEYD--PKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS
        PSRTLFTI  EE+ER+G IE F YD  PKLK        +DEDT PFHTPC SPP+FTPS SPTRD+ DF  ++  S+DN T PF  I+I+
Subjt:  PSRTLFTI-NEEDERDG-IESFEYD--PKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TPT7 Uncharacterized protein

8.1e-41

55.44

Show/hide

Query:  MDGSLNKIATALIAVFAISFLLLLAQILF-FFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEI--ASKIHDDPEAAAI-------DDELEKWRELCG
        MDG LNKIAT LI +F   F  LLAQIL+  + RRR       EP +KCFYLF WRNQSRI+PKEI   SKI       A+       +DEL KW+ELCG
Subjt:  MDGSLNKIATALIAVFAISFLLLLAQILF-FFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEI--ASKIHDDPEAAAI-------DDELEKWRELCG

Query:  PSRTLFTINEEDERDG-IESFEYD---PKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEISGH
        PSRTLFTI EE+ER+G IE FEY+   PKLK         DEDT PFHTPC SPP+ TPS SP+R   DF  ++   DDN T PF AI+I+ H
Subjt:  PSRTLFTINEEDERDG-IESFEYD---PKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEISGH

A0A6J1F429 uncharacterized protein LOC111442204

1.2e-44

59.78

Show/hide

Query:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIA--SKIHDDPEAAAIDDELEKWRELCGPSRTLFTI
        MDG LNKI   LIA+F ++FLLL+AQIL+  SRRRH H  AA+P EKCFY FCWRNQ RIEPKEIA  SK H + EAAA    +E+W+EL GPSRTLFTI
Subjt:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIA--SKIHDDPEAAAIDDELEKWRELCGPSRTLFTI

Query:  NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPP-FFTPSP--SPTRDAGDFLVEKDSSDDNGTAPFLAIEISGH
         EE+E +GIES                    T  FHTPCGSP  +FTPSP  SPTRDAG+F V+ D  D N T PFLAIEIS H
Subjt:  NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPP-FFTPSP--SPTRDAGDFLVEKDSSDDNGTAPFLAIEISGH

A0A6J1FQJ7 uncharacterized protein LOC111447877

3.0e-51

66.3

Show/hide

Query:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDD---PEAAAIDDELEKWRELCGPSRTLFT
        MDG LNKIATALI++FAI+FLLLLAQILFFFSR R HH    +P++ C YLF WR ++RIEP EIASK++DD   PE AA+D ELEKWR LCGPSR LFT
Subjt:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDD---PEAAAIDDELEKWRELCGPSRTLFT

Query:  I-NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS
        I  EE+ER+GIES E D K           D DT PFHTPCGSPPFF  SPSPTRDAGDF V+KDSSD +    FLAIEI+
Subjt:  I-NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS

A0A6J1J6W6 uncharacterized protein LOC111481774

2.1e-44

58.79

Show/hide

Query:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIA--SKIHDDPEAAAIDDELEKWRELCGPSRTLFTI
        MDG LNKI   LIA+F ++FLLL+AQIL+  SRRRH H  AAEP +KCFY FCWRNQSRI+PKEIA  SK H + EAAA+   +E+W+EL GPSRTLFTI
Subjt:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIA--SKIHDDPEAAAIDDELEKWRELCGPSRTLFTI

Query:  NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPP-FFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEISGH
         EE+E +G ES                    T  FHTPCGSP  +FTPSPSPTR+AG+F V+ D  D N T PFLA+EIS H
Subjt:  NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPP-FFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEISGH

A0A6J1L0U5 uncharacterized protein LOC111498829

2.7e-52

65.19

Show/hide

Query:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDD---PEAAAIDDELEKWRELCGPSRTLFT
        MDG L KIATALI++FAI+FLLLLAQILFFFSR R HH    +P++ C YLFCWR ++RIEP EIASK+HDD    E AA+D ELEKWR LCGPSR LFT
Subjt:  MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDD---PEAAAIDDELEKWRELCGPSRTLFT

Query:  I-NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS
        I  EE+ER+G+ES E DPK           D DT PF+TPCGSPPFFT  PSPT DA DF V+KDS D + TA FLAIEI+
Subjt:  I-NEEDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEIS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G11640.1 unknown protein

7.1e-13

33.9

Show/hide

Query:  SLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWR---NQSRIEPKE--IASKIHDDPEAAAIDDE----LEKWRELCGPSRT
        +L      L+AV     L+L A++ + F  R     + A  E    +L C +   + SRIEP    ++ ++ +D  AAA+ +E     +KWR     SR 
Subjt:  SLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWR---NQSRIEPKE--IASKIHDDPEAAAIDDE----LEKWRELCGPSRT

Query:  LFTINE-----EDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDN
        LFTI E     ED+ D + S E D   +       +   D  PF TPC SPP+FTPSPSP RD  D +   + S  N
Subjt:  LFTINE-----EDERDGIESFEYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDN

AT3G52480.1 unknown protein

3.0e-11

33.17

Show/hide

Query:  LNKIATALIAVFAISFLLLLAQ---ILFFFSRRRHHHAAAAE---------------PEEK---CFYLFCWRNQSRIEPKEIASKIHDDPEAAA--IDDE
        L   AT L+AVFA   + + AQ   +L++  R R    A +E               P  K    F+LFC  N+       I S       AAA  ++D 
Subjt:  LNKIATALIAVFAISFLLLLAQ---ILFFFSRRRHHHAAAAE---------------PEEK---CFYLFCWRNQSRIEPKEIASKIHDDPEAAA--IDDE

Query:  LEKW-----RELCGPSRTLFTI-----NEEDERDG-------------IESFEYDPKLKPPSSSDTDVD----EDTPPFHTPCGSPPFFTPSPSPTRDAG
          KW       LCGPS TLFTI     +E D R G             ++  E + ++     SD +VD      T PF TPC SPPF+TPSPSP RD  
Subjt:  LEKW-----RELCGPSRTLFTI-----NEEDERDG-------------IESFEYDPKLKPPSSSDTDVD----EDTPPFHTPCGSPPFFTPSPSPTRDAG

Query:  DFLVEKDS
           V ++S
Subjt:  DFLVEKDS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGGCAGCCTCAACAAGATCGCCACCGCTCTCATCGCCGTCTTCGCAATCTCTTTCCTACTCCTCCTCGCCCAAATCCTCTTCTTTTTCTCTCGCCGGCGCCACCA
CCACGCCGCCGCCGCCGAACCCGAGGAAAAATGCTTCTACCTTTTCTGCTGGAGGAACCAATCGCGGATCGAACCTAAAGAAATCGCGTCCAAAATCCACGATGATCCCG
AAGCGGCGGCGATCGACGACGAGTTGGAGAAGTGGCGGGAACTGTGCGGACCGTCGAGAACGCTTTTCACTATCAATGAAGAGGACGAGAGAGACGGAATCGAATCTTTC
GAGTACGACCCTAAACTGAAGCCGCCTTCTTCTTCCGATACGGATGTGGACGAGGATACGCCGCCGTTCCATACGCCCTGCGGTTCTCCTCCGTTCTTCACGCCGTCGCC
GTCGCCCACTCGTGACGCCGGCGACTTTCTGGTGGAAAAAGATTCTTCCGACGACAATGGAACGGCGCCGTTTTTGGCTATCGAGATTAGTGGCCACTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDGSLNKIATALIAVFAISFLLLLAQILFFFSRRRHHHAAAAEPEEKCFYLFCWRNQSRIEPKEIASKIHDDPEAAAIDDELEKWRELCGPSRTLFTINEEDERDGIESF
EYDPKLKPPSSSDTDVDEDTPPFHTPCGSPPFFTPSPSPTRDAGDFLVEKDSSDDNGTAPFLAIEISGH

Spg033567 (gene) of Sponge gourd (cylindrica) v1 genome