| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6596615.1 Mediator of RNA polymerase II transcription subunit 27, partial [Cucurbita argyrosperma subsp. sororia] | 3.3e-59 | 80.75 | Show/hide |
Query: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
MEKEVPDLKI TYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSP SL AT TDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE
Subjt: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
Query: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
EHAATVLQYF+GIQAKAALHPLLLWIC YQNLFSKAC +C LSV
Subjt: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
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| XP_022151433.1 nudix hydrolase 26, chloroplastic-like isoform X1 [Momordica charantia] | 2.8e-58 | 73.33 | Show/hide |
Query: QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFTGKDEEINLLGDGTERQEFGKWLWMPIEQIQ
QGGVNEGEDLK AA+REL EETGV+SAEI+AELPYWLTYD S EASIKLS+HWGVRYKGQAQKWFLLKFTGKDEEINLLGDGTERQEFGKWLWM IEQI
Subjt: QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFTGKDEEINLLGDGTERQEFGKWLWMPIEQIQ
Query: EQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNGEDDIYLKQNETQLV
E AANSRKPVYAQV KEF NFI NG+D LKQNETQLV
Subjt: EQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNGEDDIYLKQNETQLV
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| XP_022940393.1 mediator of RNA polymerase II transcription subunit 27 [Cucurbita moschata] | 3.3e-59 | 80.75 | Show/hide |
Query: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
MEKEVPDLKI TYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSP SL AT TDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE
Subjt: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
Query: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
EHAATVLQYF+GIQAKAALHPLLLWIC YQNLFSKAC +C LSV
Subjt: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
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| XP_023005694.1 mediator of RNA polymerase II transcription subunit 27 [Cucurbita maxima] | 2.8e-58 | 79.5 | Show/hide |
Query: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
MEKEVPDLKI TYERLDWLKQAS LPSQANENSIG LKEHNYHSPRMSP SL AT TDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE
Subjt: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
Query: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
EHAATVLQYF+GIQAKAALHPLLLWIC YQNLFSKAC +C LSV
Subjt: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
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| XP_031739120.1 mediator of RNA polymerase II transcription subunit 27 isoform X2 [Cucumis sativus] | 9.9e-64 | 68.6 | Show/hide |
Query: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
MEKEVP+LKI TYERLDWLKQASALPSQANENSIGALKEH+YHSPRMSPG+LGATP DKA VIELIIPSVFRAVVSLHPVGSVEPDA+AFFSPDE
Subjt: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
Query: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKACRCVYGLSVLPYLVLYGFDILMVCQSGLAVNVDGYYHNAHNLIERPEVG
EHAATVLQYFLG Q KAAL+PLLLWIC YQNLFSKAC +V L + L+ C AHNLIERPE G
Subjt: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKACRCVYGLSVLPYLVLYGFDILMVCQSGLAVNVDGYYHNAHNLIERPEVG
Query: FCSSFPH
FCSSFPH
Subjt: FCSSFPH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LGT1 Uncharacterized protein | 8.8e-58 | 77.64 | Show/hide |
Query: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
MEKEVP+LKI TYERLDWLKQASALPSQANENSIGALKEH+YHSPRMSPG+LGATP DKA VIELIIPSVFRAVVSLHPVGSVEPDA+AFFSPDE
Subjt: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
Query: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
EHAATVLQYFLG Q KAAL+PLLLWIC YQNLFSKAC +C LSV
Subjt: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
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| A0A1S3B7L6 mediator of RNA polymerase II transcription subunit 27 | 3.3e-57 | 76.4 | Show/hide |
Query: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
+EKEVP+LKI TYERLDWLKQASALPSQANENSIGALKEH+YHSPRMSPG+LGATP DKA VIELIIPSVFRAVVSLHP+GSVEPDA+AFFSPDE
Subjt: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
Query: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
EHAATVLQYFLG Q KAAL+PLLLWIC YQNLFSKAC +C LSV
Subjt: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
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| A0A6J1DC58 nudix hydrolase 26, chloroplastic-like isoform X1 | 1.4e-58 | 73.33 | Show/hide |
Query: QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFTGKDEEINLLGDGTERQEFGKWLWMPIEQIQ
QGGVNEGEDLK AA+REL EETGV+SAEI+AELPYWLTYD S EASIKLS+HWGVRYKGQAQKWFLLKFTGKDEEINLLGDGTERQEFGKWLWM IEQI
Subjt: QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFTGKDEEINLLGDGTERQEFGKWLWMPIEQIQ
Query: EQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNGEDDIYLKQNETQLV
E AANSRKPVYAQV KEF NFI NG+D LKQNETQLV
Subjt: EQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNGEDDIYLKQNETQLV
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| A0A6J1FP59 mediator of RNA polymerase II transcription subunit 27 | 1.6e-59 | 80.75 | Show/hide |
Query: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
MEKEVPDLKI TYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSP SL AT TDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE
Subjt: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
Query: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
EHAATVLQYF+GIQAKAALHPLLLWIC YQNLFSKAC +C LSV
Subjt: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
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| A0A6J1KZZ9 mediator of RNA polymerase II transcription subunit 27 | 1.4e-58 | 79.5 | Show/hide |
Query: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
MEKEVPDLKI TYERLDWLKQAS LPSQANENSIG LKEHNYHSPRMSP SL AT TDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE
Subjt: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
Query: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
EHAATVLQYF+GIQAKAALHPLLLWIC YQNLFSKAC +C LSV
Subjt: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC-RCVYGLSV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q2J3I9 RNA pyrophosphohydrolase | 5.4e-20 | 41.86 | Show/hide |
Query: QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFTGKDEEINLLGDGTERQEFGKWLWMPIEQIQ
QGGV+ GED AAKREL EET V S E IAE+P WL YD + + W RY+GQ QKWF ++FTG+D EI+++ + EF W W P+ +
Subjt: QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFTGKDEEINLLGDGTERQEFGKWLWMPIEQIQ
Query: EQVSTLLLISFFFPATIFLKSLKSFEQAA
+ L++ F P ++ + +K F Q A
Subjt: EQVSTLLLISFFFPATIFLKSLKSFEQAA
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| Q8RWM3 Mediator of RNA polymerase II transcription subunit 27 | 1.1e-28 | 48.03 | Show/hide |
Query: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
+EK VP +K+ TY RL+WLK+A++LP +++ A K S ++ G L DK AVIEL PS+FRA+VSL P GSV+PDAVAFFSPDE
Subjt: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
Query: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC
EHAAT LQYFLG AL+ LLLWIC ++++FSK C
Subjt: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC
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| Q9C6Z2 Nudix hydrolase 25 | 1.5e-25 | 36.07 | Show/hide |
Query: RPEVGFCSSFPHRLLLRRTIVTLTPV----QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFT
RP VG C L+ + + + QGG+ +GED K+AA REL EETGVVSAEI++E+P WLTYDF K+++ WG + GQAQKW+L++
Subjt: RPEVGFCSSFPHRLLLRRTIVTLTPV----QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFT
Query: GKDE--EINLLGDGTERQEFGKWLWMPIEQIQEQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNG
++ EINL + + EF +W W E++ EQA + ++P Y +V K FG+F+ G
Subjt: GKDE--EINLLGDGTERQEFGKWLWMPIEQIQEQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNG
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| Q9CAF2 Nudix hydrolase 26, chloroplastic | 2.2e-34 | 50 | Show/hide |
Query: QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFTGKDEEINLLGDGTERQEFGKWLWMPIEQIQ
QGG++EGED + A REL EETGV SAEI+AE P+W+TYDF + KL WG +KGQAQKWFLLKFTGKDEEINLLGDGTE+ EFG+W W +Q+
Subjt: QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFTGKDEEINLLGDGTERQEFGKWLWMPIEQIQ
Query: EQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQ
E A +KPVY +V F + +Q
Subjt: EQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQ
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| Q9FNH4 Nudix hydrolase 27, chloroplastic | 3.5e-35 | 44.86 | Show/hide |
Query: RPEVGFCSSFPHRLLLRRTIV----TLTPVQGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFT
R VG C P R + + + T QGG +EGEDL+ AA REL EETGV SAE IAE+P WLTYDF E KL++ W YKGQAQKWFL KFT
Subjt: RPEVGFCSSFPHRLLLRRTIV----TLTPVQGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFT
Query: GKDEEINLLGDGTERQEFGKWLWMPIEQIQEQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNGEDDI
GK+EEINLLGDGT + EF W WM EQ+ E A ++PVY V K+F + +D +
Subjt: GKDEEINLLGDGTERQEFGKWLWMPIEQIQEQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNGEDDI
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G30110.1 nudix hydrolase homolog 25 | 1.0e-26 | 36.07 | Show/hide |
Query: RPEVGFCSSFPHRLLLRRTIVTLTPV----QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFT
RP VG C L+ + + + QGG+ +GED K+AA REL EETGVVSAEI++E+P WLTYDF K+++ WG + GQAQKW+L++
Subjt: RPEVGFCSSFPHRLLLRRTIVTLTPV----QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFT
Query: GKDE--EINLLGDGTERQEFGKWLWMPIEQIQEQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNG
++ EINL + + EF +W W E++ EQA + ++P Y +V K FG+F+ G
Subjt: GKDE--EINLLGDGTERQEFGKWLWMPIEQIQEQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNG
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| AT1G30110.2 nudix hydrolase homolog 25 | 1.0e-26 | 36.07 | Show/hide |
Query: RPEVGFCSSFPHRLLLRRTIVTLTPV----QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFT
RP VG C L+ + + + QGG+ +GED K+AA REL EETGVVSAEI++E+P WLTYDF K+++ WG + GQAQKW+L++
Subjt: RPEVGFCSSFPHRLLLRRTIVTLTPV----QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFT
Query: GKDE--EINLLGDGTERQEFGKWLWMPIEQIQEQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNG
++ EINL + + EF +W W E++ EQA + ++P Y +V K FG+F+ G
Subjt: GKDE--EINLLGDGTERQEFGKWLWMPIEQIQEQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNG
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| AT3G09180.1 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | 7.7e-30 | 48.03 | Show/hide |
Query: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
+EK VP +K+ TY RL+WLK+A++LP +++ A K S ++ G L DK AVIEL PS+FRA+VSL P GSV+PDAVAFFSPDE
Subjt: MEKEVPDLKILTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDE-----
Query: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC
EHAAT LQYFLG AL+ LLLWIC ++++FSK C
Subjt: ---------------EHAATVLQYFLGIQAKAALHPLLLWICCYQNLFSKAC
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| AT3G10620.1 nudix hydrolase homolog 26 | 1.6e-35 | 50 | Show/hide |
Query: QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFTGKDEEINLLGDGTERQEFGKWLWMPIEQIQ
QGG++EGED + A REL EETGV SAEI+AE P+W+TYDF + KL WG +KGQAQKWFLLKFTGKDEEINLLGDGTE+ EFG+W W +Q+
Subjt: QGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFTGKDEEINLLGDGTERQEFGKWLWMPIEQIQ
Query: EQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQ
E A +KPVY +V F + +Q
Subjt: EQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQ
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| AT5G06340.1 nudix hydrolase homolog 27 | 2.5e-36 | 44.86 | Show/hide |
Query: RPEVGFCSSFPHRLLLRRTIV----TLTPVQGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFT
R VG C P R + + + T QGG +EGEDL+ AA REL EETGV SAE IAE+P WLTYDF E KL++ W YKGQAQKWFL KFT
Subjt: RPEVGFCSSFPHRLLLRRTIV----TLTPVQGGVNEGEDLKTAAKRELVEETGVVSAEIIAELPYWLTYDFSTEASIKLSKHWGVRYKGQAQKWFLLKFT
Query: GKDEEINLLGDGTERQEFGKWLWMPIEQIQEQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNGEDDI
GK+EEINLLGDGT + EF W WM EQ+ E A ++PVY V K+F + +D +
Subjt: GKDEEINLLGDGTERQEFGKWLWMPIEQIQEQVSTLLLISFFFPATIFLKSLKSFEQAANSRKPVYAQVTKEFGNFIQQNGEDDI
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