CuGenDBv2

Gene ID	Spg033652
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA polymerase epsilon catalytic subunit A, putative
Genome location	scaffold13:38758872..38759825
RNA-Seq Expression	Spg033652
Synteny	Spg033652
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6585589.1 hypothetical protein SDJN03_18322, partial [Cucurbita argyrosperma subsp. sororia]

6.8e-59

87.5

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VDRDT+GIDYKRSSSFP A G AE++ FAESD+ERKNLEKLKKN
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
        GWW RSNSAFLNEPPVLDGAAKAYAS+YGV DVASF
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF

XP_008444729.1 PREDICTED: uncharacterized protein LOC103487979 [Cucumis melo]

4.4e-58

78.67

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN
        MGSLM GW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAIS+PVDRY DR+ +GIDYKRSSSFPPA   A E  F E+ ++RKNLE+L+K 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVGAWLH
        GWWTRSNSAFLNEPPVLDGA+KA  S YGVADVAS KLNH ++GVGA LH
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVGAWLH

XP_022951681.1 uncharacterized protein LOC111454424 [Cucurbita moschata]

4.4e-58

86.76

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VD DT+GIDYKRSSSFP A G AE++ FAESD+ERKNLEKLKKN
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
        GWW RSNSAFLNEPPVLDGAAKAYAS+YGV DVASF
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF

XP_023002545.1 uncharacterized protein LOC111496358 [Cucurbita maxima]

1.8e-59

88.24

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VDRDT+GIDYKRSSSFP A GAAE++ FAESD+ERKNLEKLKKN
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
        GWW RSNSAFLNEPPVLDGAAKAYAS+YGV DVASF
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF

XP_038886573.1 uncharacterized protein LOC120076743 [Benincasa hispida]

6.5e-62

82.31

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN
        MGSLM+GWNSPVLDPKSVKFKRNRSLTK+EIEAYW+SK+K EEEHLRAISMPVDRY+DR+T+GIDYKRSSSFPPA   + E  FAE+D+ER+NLEKLKK 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVGA
        GWWTRSNSAFLNEPPVLDGA K YAS YGVADVAS KLNHS +GVG+
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVGA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BBS7 uncharacterized protein LOC103487979

2.1e-58

78.67

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN
        MGSLM GW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAIS+PVDRY DR+ +GIDYKRSSSFPPA   A E  F E+ ++RKNLE+L+K 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVGAWLH
        GWWTRSNSAFLNEPPVLDGA+KA  S YGVADVAS KLNH ++GVGA LH
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVGAWLH

A0A5A7VD66 Putative DNA polymerase epsilon catalytic subunit A

2.1e-58

78.67

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN
        MGSLM GW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAIS+PVDRY DR+ +GIDYKRSSSFPPA   A E  F E+ ++RKNLE+L+K 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVGAWLH
        GWWTRSNSAFLNEPPVLDGA+KA  S YGVADVAS KLNH ++GVGA LH
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVGAWLH

A0A6J1CTD0 uncharacterized protein LOC111014033

4.7e-58

82.31

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN
        MGSLMAGWNSPV DPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVD +VDRD +GIDYKRSSSFPPA G AEE     SD ERKNLEKLK N
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVGA
         WWTRSNSAFLNEPPVLDGAAKAYA        ASFKLNHS +G+GA
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVGA

A0A6J1GI71 uncharacterized protein LOC111454424

2.1e-58

86.76

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VD DT+GIDYKRSSSFP A G AE++ FAESD+ERKNLEKLKKN
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
        GWW RSNSAFLNEPPVLDGAAKAYAS+YGV DVASF
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF

A0A6J1KP90 uncharacterized protein LOC111496358

8.6e-60

88.24

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VDRDT+GIDYKRSSSFP A GAAE++ FAESD+ERKNLEKLKKN
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
        GWW RSNSAFLNEPPVLDGAAKAYAS+YGV DVASF
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G19530.1 unknown protein

1.7e-15

38.52

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Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRK-LEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKK
        MGSLM+GW+S V DPKSV  +R +SLT+EEI+ +W++K+K  EEEH++A S  V +                   A   A+EK   +   E ++    K 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRK-LEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKK

Query:  NGWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVA
        +GWW ++  AFLNEP   +G    Y S++ VA +A
Subjt:  NGWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVA

Sequences

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CDS sequence

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ATGGGTTCTCTAATGGCCGGATGGAACTCTCCCGTTCTCGATCCTAAATCAGTCAAGTTCAAGAGAAATCGGTCGCTTACGAAGGAGGAAATCGAAGCTTACTGGAGATC
GAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGATTTCTATGCCGGTGGATCGTTATGTCGATCGCGATACGCTCGGAATAGACTACAAAAGATCGAGTTCGTTTCCGC
CGGCGACCGGTGCGGCGGAGGAAAAAGGATTTGCAGAGAGCGACGTGGAGAGGAAAAACCTAGAGAAATTGAAGAAAAATGGCTGGTGGACGAGGAGCAATTCGGCGTTT
CTAAATGAACCGCCAGTCCTCGACGGCGCAGCGAAAGCATACGCGTCGCGATACGGCGTCGCGGACGTGGCCTCGTTCAAGTTGAATCACAGCGATGATGGAGTCGGTGC
TTGGTTACACTACTGA

mRNA sequence

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Protein sequence

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MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTLGIDYKRSSSFPPATGAAEEKGFAESDVERKNLEKLKKNGWWTRSNSAF
LNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVGAWLHY

Spg033652 (gene) of Sponge gourd (cylindrica) v1 genome