; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg033716 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033716
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGibberellin regulated protein
Genome locationscaffold13:38120717..38121583
RNA-Seq ExpressionSpg033716
SyntenySpg033716
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951559.1 snakin-2-like [Cucurbita moschata]9.1e-4183.51Show/hide
Query:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M+I SK LIASLLLSLLFLHSVES G   +SPSPQKMDCGGAC  RC+LSSRPRLC+RACGTCC+RCNCVPPGTSGNHH+CPCYA++TTHGGRLKCP
Subjt:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

XP_023002563.1 snakin-2-like [Cucurbita maxima]5.3e-4184.54Show/hide
Query:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M+I SK LIASLLLSLLFLHSVES G   +SPSPQKMDCGGAC  RC+LSSRPRLC+RACGTCC+RCNCVPPGTSGNHHLCPCYA++TTHGGRLKCP
Subjt:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

XP_023537913.1 snakin-2-like [Cucurbita pepo subsp. pepo]7.7e-4082.47Show/hide
Query:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M+I SK LIASLLLSLLFLHSVES G   +SPSPQKMDCGGAC  RC+LSSR RLC+RACGTCC+RCNCVPPGTSGNHH+CPCYA++TTHGGRLKCP
Subjt:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

XP_038886088.1 snakin-2-like isoform X1 [Benincasa hispida]4.8e-4287.88Show/hide
Query:  MSIFSKLLIASLLLSLLFLHS--VESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        MS FSK LIASL LSLLFLHS  VES GVG I PSPQKMDCGGAC GRC+LSSR RLCNRACGTCC+RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Subjt:  MSIFSKLLIASLLLSLLFLHS--VESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

XP_038886089.1 snakin-2-like isoform X2 [Benincasa hispida]1.5e-4389.69Show/hide
Query:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        MS FSK LIASL LSLLFLHSVES GVG I PSPQKMDCGGAC GRC+LSSR RLCNRACGTCC+RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Subjt:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LNS5 Uncharacterized protein7.0e-3981.44Show/hide
Query:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M I +K L ASLLLSLLFLH VES GVG + P+P++MDC GAC  RC LSSRPRLCNRACGTCC+RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Subjt:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

A0A1S3BBY7 snakin-2-like4.9e-4084.54Show/hide
Query:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        MSI +K L ASLLLSLLFLH VES GVG +  SPQKMDC GAC  RC LSSRPRLCNRACGTCC+RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Subjt:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

A0A6J1CRW3 snakin-2-like3.6e-3574.31Show/hide
Query:  MSIFSKLLIAS--LLLSLLFLHS---------VESKGVGTISPS-PQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMT
        MS+FSK+LI +  LL SLLFLH+         VES     ISPS P KMDCGGAC GRC+LSSRPRLCNRACGTCC+RCNCVPPGTSGNHHLCPCYAAMT
Subjt:  MSIFSKLLIAS--LLLSLLFLHS---------VESKGVGTISPS-PQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMT

Query:  THGGRLKCP
        THGGR KCP
Subjt:  THGGRLKCP

A0A6J1GJ50 snakin-2-like4.4e-4183.51Show/hide
Query:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M+I SK LIASLLLSLLFLHSVES G   +SPSPQKMDCGGAC  RC+LSSRPRLC+RACGTCC+RCNCVPPGTSGNHH+CPCYA++TTHGGRLKCP
Subjt:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

A0A6J1KTY1 snakin-2-like2.6e-4184.54Show/hide
Query:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M+I SK LIASLLLSLLFLHSVES G   +SPSPQKMDCGGAC  RC+LSSRPRLC+RACGTCC+RCNCVPPGTSGNHHLCPCYA++TTHGGRLKCP
Subjt:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 114.3e-2560.82Show/hide
Query:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M++F ++L+ASLL+SLL L  V +  V T + +P K+DC   C  RC LSSRP LC+RACGTCC RCNCV PGTSGN+  CPCY ++TTHGGR KCP
Subjt:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

P46687 Gibberellin-regulated protein 35.0e-2657.84Show/hide
Query:  MSIFSKLLIASLLLSL-----LFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLK
        M+IF   L+  L+L       L +H+ E   VG       K+DCGG C GRC  SSRP LC RAC +CC RCNCVPPGT+GNHHLCPCYA++TT GGRLK
Subjt:  MSIFSKLLIASLLLSL-----LFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLK

Query:  CP
        CP
Subjt:  CP

P46688 Gibberellin-regulated protein 24.7e-2453.54Show/hide
Query:  MSIFSKLLIASLLLSLLFLHS--VESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M++F   L+  L++  L  +   V +     +     K+DCGG C  RC  SSR +LC RAC +CC RCNCVPPGTSGN HLCPCYA++TTHGGRLKCP
Subjt:  MSIFSKLLIASLLLSLLFLHS--VESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

P46689 Gibberellin-regulated protein 12.0e-2762.11Show/hide
Query:  SKLLIASLLLSLLFLHSVESKGVGTISPS--PQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        SK LIASLL+SLL L  V++    +   +   +K+DCG AC+ RC+LS RPRLC+RACGTCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Subjt:  SKLLIASLLLSLLFLHSVESKGVGTISPS--PQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

Q93X17 Snakin-24.4e-3063.37Show/hide
Query:  SKLLIASLLLSLLFLHSVE--------SKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKC
        SK L ASLLLSLL L  V+        S  +   + S +K+DCGGAC  RC+LSSRPRLCNRACGTCC RCNCVPPGTSGN   CPCYA++TTHG + KC
Subjt:  SKLLIASLLLSLLFLHSVE--------SKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKC

Query:  P
        P
Subjt:  P

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 11.5e-2862.11Show/hide
Query:  SKLLIASLLLSLLFLHSVESKGVGTISPS--PQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        SK LIASLL+SLL L  V++    +   +   +K+DCG AC+ RC+LS RPRLC+RACGTCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Subjt:  SKLLIASLLLSLLFLHSVESKGVGTISPS--PQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

AT1G75750.2 GAST1 protein homolog 11.9e-2862.77Show/hide
Query:  SKLLIASLLLSLLFLHSVES-KGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        SK LIASLL+SLL L  V++ +     +   +K+DCG AC+ RC+LS RPRLC+RACGTCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Subjt:  SKLLIASLLLSLLFLHSVES-KGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

AT2G18420.1 Gibberellin-regulated family protein3.0e-2660.82Show/hide
Query:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M++F ++L+ASLL+SLL L  V +  V T + +P K+DC   C  RC LSSRP LC+RACGTCC RCNCV PGTSGN+  CPCY ++TTHGGR KCP
Subjt:  MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

AT4G09600.1 GAST1 protein homolog 33.6e-2757.84Show/hide
Query:  MSIFSKLLIASLLLSL-----LFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLK
        M+IF   L+  L+L       L +H+ E   VG       K+DCGG C GRC  SSRP LC RAC +CC RCNCVPPGT+GNHHLCPCYA++TT GGRLK
Subjt:  MSIFSKLLIASLLLSL-----LFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLK

Query:  CP
        CP
Subjt:  CP

AT4G09610.1 GAST1 protein homolog 23.3e-2553.54Show/hide
Query:  MSIFSKLLIASLLLSLLFLHS--VESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M++F   L+  L++  L  +   V +     +     K+DCGG C  RC  SSR +LC RAC +CC RCNCVPPGTSGN HLCPCYA++TTHGGRLKCP
Subjt:  MSIFSKLLIASLLLSLLFLHS--VESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATCTTCTCCAAACTTCTCATTGCTTCACTTCTCCTCTCTCTCCTCTTCCTCCACTCTGTGGAATCCAAAGGAGTAGGAACAATCTCCCCAAGTCCTCAGAAAAT
GGACTGCGGCGGAGCCTGCATTGGGAGGTGTAAGCTGTCGTCGAGGCCGAGGCTGTGCAATAGGGCGTGTGGGACGTGCTGTAAGCGATGCAACTGCGTTCCGCCGGGGA
CTTCCGGCAACCACCACCTGTGCCCCTGCTACGCCGCCATGACCACCCACGGCGGCCGCCTCAAGTGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATCTTCTCCAAACTTCTCATTGCTTCACTTCTCCTCTCTCTCCTCTTCCTCCACTCTGTGGAATCCAAAGGAGTAGGAACAATCTCCCCAAGTCCTCAGAAAAT
GGACTGCGGCGGAGCCTGCATTGGGAGGTGTAAGCTGTCGTCGAGGCCGAGGCTGTGCAATAGGGCGTGTGGGACGTGCTGTAAGCGATGCAACTGCGTTCCGCCGGGGA
CTTCCGGCAACCACCACCTGTGCCCCTGCTACGCCGCCATGACCACCCACGGCGGCCGCCTCAAGTGCCCTTAA
Protein sequenceShow/hide protein sequence
MSIFSKLLIASLLLSLLFLHSVESKGVGTISPSPQKMDCGGACIGRCKLSSRPRLCNRACGTCCKRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP