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Spg033753 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033753
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionComplex 1 LYR protein
Genome locationscaffold13:37789252..37789725
RNA-Seq ExpressionSpg033753
SyntenySpg033753
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144304.1 uncharacterized protein LOC111014019 [Momordica charantia]7.2e-7289.1Show/hide
Query:  MTMRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV
        MT+RL+GKCLNLS+HK+ LACNKI F+PRVLHNGPDTIDELLDRHVVKK+KS++DEDDELITQR LTSTRREALSLYRDI+RATRFFMWPDSRGVLWRDV
Subjt:  MTMRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV

Query:  LRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ
        LRENARKEFE ARYESDPE+VTRLLIGGRDAVQSALDKLAEKQMQEI+KKQ G DQ
Subjt:  LRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ

XP_022961619.1 uncharacterized protein LOC111462339 [Cucurbita moschata]4.4e-6985.26Show/hide
Query:  MTMRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV
        M+MRL+ KC+ LS HKN LACNK+ F+PR+LHNGPDTIDELLDRHVVKK+KS+DD+++ELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV
Subjt:  MTMRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV

Query:  LRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ
        LR+NARKEFE+AR+E+DPEIVTRLLIGGRDAVQSALDKLAEKQ QEI+KKQSGRD+
Subjt:  LRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ

XP_023545212.1 uncharacterized protein LOC111804691 [Cucurbita pepo subsp. pepo]2.8e-6885.26Show/hide
Query:  MTMRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV
        M+MRL+ KC+ LS HKN LACNKI + PR LHNGPDTIDELLDRHVVKK+KS+DD+++ELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV
Subjt:  MTMRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV

Query:  LRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ
        LR+NARKEFE+AR+E+DPEIVTRLLIGGRDAVQSALDKLAEKQ QEI+KKQSGRD+
Subjt:  LRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ

XP_031736624.1 uncharacterized protein LOC101214249 [Cucumis sativus]6.3e-6885.44Show/hide
Query:  MTMRLLGKCLNL-SVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRD
        MTMRL+GK LNL S+HKN L C+KI F+PRVLHNGPDT++ELLDRHVVKK+K +DDEDD+LITQRRLT+TRREALSLYRDILRATRFFMWPDSRGVLWRD
Subjt:  MTMRLLGKCLNL-SVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL
        VLRENARKEFE+AR ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EI+KKQ GRDQL
Subjt:  VLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL

XP_038884246.1 uncharacterized protein LOC120075144 [Benincasa hispida]2.5e-7289.68Show/hide
Query:  MRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR
        MRL+GKCLNLS+HKN L CNKI F+PRVLHNGPDT+ ELLDRHVVKK+KS+DDE+DELITQRRLT+TRREALSLYRDILRATRFFMWPDSRGVLWRDVLR
Subjt:  MRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLR

Query:  ENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL
        +NARKEFE+ARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEI+KKQ+GRDQL
Subjt:  ENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL

TrEMBL top hitse value%identityAlignment
A0A0A0LMK5 Uncharacterized protein3.1e-6885.44Show/hide
Query:  MTMRLLGKCLNL-SVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRD
        MTMRL+GK LNL S+HKN L C+KI F+PRVLHNGPDT++ELLDRHVVKK+K +DDEDD+LITQRRLT+TRREALSLYRDILRATRFFMWPDSRGVLWRD
Subjt:  MTMRLLGKCLNL-SVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL
        VLRENARKEFE+AR ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EI+KKQ GRDQL
Subjt:  VLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL

A0A1S4DWJ1 uncharacterized protein LOC1034885699.9e-6784.81Show/hide
Query:  MTMRLLGKCLNL-SVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRD
        MTMRL+GK LNL S+ KN L C+KI F+PRVLHNGPDT++ELLDRHVVKK+KS DD+ D+LITQRRLTSTRREALSLYRDILRATRFFMWPDS+GVLWRD
Subjt:  MTMRLLGKCLNL-SVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL
        VLR+NARKEFE+AR+ESDPEIVTRLLIGGRDAVQSALDKLAEKQ +EI+KKQSGRDQL
Subjt:  VLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL

A0A5A7VCD6 Complex 1 LYR protein9.9e-6784.81Show/hide
Query:  MTMRLLGKCLNL-SVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRD
        MTMRL+GK LNL S+ KN L C+KI F+PRVLHNGPDT++ELLDRHVVKK+KS DD+ D+LITQRRLTSTRREALSLYRDILRATRFFMWPDS+GVLWRD
Subjt:  MTMRLLGKCLNL-SVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL
        VLR+NARKEFE+AR+ESDPEIVTRLLIGGRDAVQSALDKLAEKQ +EI+KKQSGRDQL
Subjt:  VLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL

A0A6J1CRY1 uncharacterized protein LOC1110140193.5e-7289.1Show/hide
Query:  MTMRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV
        MT+RL+GKCLNLS+HK+ LACNKI F+PRVLHNGPDTIDELLDRHVVKK+KS++DEDDELITQR LTSTRREALSLYRDI+RATRFFMWPDSRGVLWRDV
Subjt:  MTMRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV

Query:  LRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ
        LRENARKEFE ARYESDPE+VTRLLIGGRDAVQSALDKLAEKQMQEI+KKQ G DQ
Subjt:  LRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ

A0A6J1HEL0 uncharacterized protein LOC1114623392.1e-6985.26Show/hide
Query:  MTMRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV
        M+MRL+ KC+ LS HKN LACNK+ F+PR+LHNGPDTIDELLDRHVVKK+KS+DD+++ELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV
Subjt:  MTMRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDV

Query:  LRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ
        LR+NARKEFE+AR+E+DPEIVTRLLIGGRDAVQSALDKLAEKQ QEI+KKQSGRD+
Subjt:  LRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76060.1 LYR family of Fe/S cluster biogenesis protein9.5e-4664.43Show/hide
Query:  LGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDD-ELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLREN
        L K  NL+   + +  +  V   R LH GPDT++ELL+RH+ KK+K   D D+ E + +RRLTSTRREALSLYRDILRATRFF W DSRG LWRDVLREN
Subjt:  LGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDD-ELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLREN

Query:  ARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSG
        ARKEFE AR+E+DPE++TRLLIGG DAV SALDKLAEKQ + I K++ G
Subjt:  ARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATGAGGCTGCTGGGAAAATGTTTAAACCTGTCAGTTCATAAGAATTCTCTGGCTTGCAATAAAATTGTTTTCTACCCTCGAGTTTTGCATAATGGTCCAGACAC
AATAGATGAACTTTTAGACAGACACGTGGTTAAGAAAAAAAAGTCCTATGATGATGAAGATGATGAATTGATAACTCAGCGACGCCTCACCAGCACTCGACGTGAGGCTC
TAAGTCTCTACCGAGACATTCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTCTCGAGGTGTCTTGTGGCGGGATGTTCTCAGGGAGAATGCCCGGAAGGAGTTTGAG
AATGCTCGCTATGAGTCTGATCCAGAAATTGTGACCCGACTTCTCATTGGTGGGCGCGATGCAGTGCAGTCGGCTCTCGACAAGCTTGCTGAGAAGCAAATGCAGGAGAT
TAATAAGAAACAAAGTGGTCGAGATCAACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCATGAGGCTGCTGGGAAAATGTTTAAACCTGTCAGTTCATAAGAATTCTCTGGCTTGCAATAAAATTGTTTTCTACCCTCGAGTTTTGCATAATGGTCCAGACAC
AATAGATGAACTTTTAGACAGACACGTGGTTAAGAAAAAAAAGTCCTATGATGATGAAGATGATGAATTGATAACTCAGCGACGCCTCACCAGCACTCGACGTGAGGCTC
TAAGTCTCTACCGAGACATTCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTCTCGAGGTGTCTTGTGGCGGGATGTTCTCAGGGAGAATGCCCGGAAGGAGTTTGAG
AATGCTCGCTATGAGTCTGATCCAGAAATTGTGACCCGACTTCTCATTGGTGGGCGCGATGCAGTGCAGTCGGCTCTCGACAAGCTTGCTGAGAAGCAAATGCAGGAGAT
TAATAAGAAACAAAGTGGTCGAGATCAACTCTGA
Protein sequenceShow/hide protein sequence
MTMRLLGKCLNLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKKKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFE
NARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL