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Spg033775 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033775
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:34987175..34993986
RNA-Seq ExpressionSpg033775
SyntenySpg033775
Gene Ontology termsGO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0005488 - binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]1.6e-3143.4Show/hide
Query:  SSLSYCFGFARPLSDRETTDLMTLLSLIGEIVFSTTMKDIRVWSPDPSLGFSCRSFFRCLLDPVSSEPSIFSLLWKM------------AEEDLDHMLWN
        +S S+ FGF R LSDRET++++ L+SL+    F    +D+ VWSP P  GF C+SFF+CL++   +  S+ SL+W++             EEDLDH+LW+
Subjt:  SSLSYCFGFARPLSDRETTDLMTLLSLIGEIVFSTTMKDIRVWSPDPSLGFSCRSFFRCLLDPVSSEPSIFSLLWKM------------AEEDLDHMLWN

Query:  CAFARTVWDEFFGSFGLQFARHRGLGETIEEFLPHPPFREQGKFLWQAGICAIIWGLWG
        C     VWD+F  +FGL +ARHR +  T+EEFL + P  E+G FLW A + A + G  G
Subjt:  CAFARTVWDEFFGSFGLQFARHRGLGETIEEFLPHPPFREQGKFLWQAGICAIIWGLWG

VVA21938.1 Hypothetical predicted protein, partial [Prunus dulcis]5.9e-2945.45Show/hide
Query:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF
        MW+  + +  +  +G FSVSI+I        W++G YGP  P+ R+ FW EL  L+GLCG+ WCI GDFNVV   SEK++GGR + S+K FN++I+D + 
Subjt:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF

Query:  FDPPLSNGRFTWSNSRARS---RIDRALCSKGWMDTFHGVRQS
         DP L N  FTWSN R  +   R+DR L S+ W D+F  V+ +
Subjt:  FDPPLSNGRFTWSNSRARS---RIDRALCSKGWMDTFHGVRQS

VVA41200.1 PREDICTED: RNA-directed DNA polymerase, partial [Prunus dulcis]2.6e-2945.45Show/hide
Query:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF
        MW+  + +  +  +G FSVSI+I        W++G YGP  P+ R+ FW EL  L+GLCG+ WCI GDFNVV   SEK++GGR + S+K+FN++I+D + 
Subjt:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF

Query:  FDPPLSNGRFTWSNSRARS---RIDRALCSKGWMDTFHGVRQS
         DP L N  FTWSN R  +   R+DR L S+ W D+F  V+ +
Subjt:  FDPPLSNGRFTWSNSRARS---RIDRALCSKGWMDTFHGVRQS

XP_028075126.1 uncharacterized protein LOC114277426 [Camellia sinensis]7.4e-3246.53Show/hide
Query:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF
        MWD   V+  EV++GVFS+SIK + +D    W+TG YGP RP  RQ++W+EL  L+GLC  +WC+  DFNVV   SEK +G   ++S++ F+ +I +C  
Subjt:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF

Query:  FDPPLSNGRFTWSN---SRARSRIDRALCSKGWMDTFHGVRQSL
         DPPLSN RFTWSN   +R   R+DR L + GW + F  +R+ +
Subjt:  FDPPLSNGRFTWSN---SRARSRIDRALCSKGWMDTFHGVRQSL

XP_028093340.1 uncharacterized protein LOC114293463 [Camellia sinensis]2.8e-3146.53Show/hide
Query:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF
        MWD   V+  EV+ GVFS+SI  + +D  + W+TG YGP +P  RQE+W+EL  L+GLC  +WC+ GDFNVV   SEK +G   S+S++ F+ +I DC  
Subjt:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF

Query:  FDPPLSNGRFTWSN---SRARSRIDRALCSKGWMDTFHGVRQSL
         D PLSN RFTWSN   +R   ++DR L + G  + F  +RQ +
Subjt:  FDPPLSNGRFTWSN---SRARSRIDRALCSKGWMDTFHGVRQSL

TrEMBL top hitse value%identityAlignment
A0A5D3CI74 Calpain-type cysteine protease DEK18.0e-3243.4Show/hide
Query:  SSLSYCFGFARPLSDRETTDLMTLLSLIGEIVFSTTMKDIRVWSPDPSLGFSCRSFFRCLLDPVSSEPSIFSLLWKM------------AEEDLDHMLWN
        +S S+ FGF R LSDRET++++ L+SL+    F    +D+ VWSP P  GF C+SFF+CL++   +  S+ SL+W++             EEDLDH+LW+
Subjt:  SSLSYCFGFARPLSDRETTDLMTLLSLIGEIVFSTTMKDIRVWSPDPSLGFSCRSFFRCLLDPVSSEPSIFSLLWKM------------AEEDLDHMLWN

Query:  CAFARTVWDEFFGSFGLQFARHRGLGETIEEFLPHPPFREQGKFLWQAGICAIIWGLWG
        C     VWD+F  +FGL +ARHR +  T+EEFL + P  E+G FLW A + A + G  G
Subjt:  CAFARTVWDEFFGSFGLQFARHRGLGETIEEFLPHPPFREQGKFLWQAGICAIIWGLWG

A0A5E4F859 Reverse transcriptase domain-containing protein (Fragment)2.8e-2945.45Show/hide
Query:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF
        MW+  + +  +  +G FSVSI+I        W++G YGP  P+ R+ FW EL  L+GLCG+ WCI GDFNVV   SEK++GGR + S+K FN++I+D + 
Subjt:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF

Query:  FDPPLSNGRFTWSNSRARS---RIDRALCSKGWMDTFHGVRQS
         DP L N  FTWSN R  +   R+DR L S+ W D+F  V+ +
Subjt:  FDPPLSNGRFTWSNSRARS---RIDRALCSKGWMDTFHGVRQS

A0A5E4GN72 PREDICTED: RNA-directed DNA polymerase (Fragment)1.3e-2945.45Show/hide
Query:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF
        MW+  + +  +  +G FSVSI+I        W++G YGP  P+ R+ FW EL  L+GLCG+ WCI GDFNVV   SEK++GGR + S+K+FN++I+D + 
Subjt:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF

Query:  FDPPLSNGRFTWSNSRARS---RIDRALCSKGWMDTFHGVRQS
         DP L N  FTWSN R  +   R+DR L S+ W D+F  V+ +
Subjt:  FDPPLSNGRFTWSNSRARS---RIDRALCSKGWMDTFHGVRQS

A0A6P5T1U8 uncharacterized protein LOC1107621453.1e-2845.77Show/hide
Query:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF
        +W+   V+ ++  +  FSVSIKI+       W++G YGP R + R  FW EL ALYGLCG +WCI GDFNVV   S+K++GG  + S+++FN +I D + 
Subjt:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF

Query:  FDPPLSNGRFTWSNSRAR---SRIDRALCSKGWMDTFHGVRQ
         DP L N  FTWSN R      R+DR L + GW D F   RQ
Subjt:  FDPPLSNGRFTWSNSRAR---SRIDRALCSKGWMDTFHGVRQ

M5XUF8 Reverse transcriptase domain-containing protein (Fragment)2.4e-2844.06Show/hide
Query:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF
        MW+  +++  +  +G FSVSI+I        W++G YG   P+ R+ FW EL  L+GLCG+ WCI GDFNVV   SEK++GGR + S+K+FN++I+D + 
Subjt:  MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSF

Query:  FDPPLSNGRFTWSNSRARS---RIDRALCSKGWMDTFHGVRQS
         DP L N  FTWSN R  +   R+DR L  + W D+F  V+ +
Subjt:  FDPPLSNGRFTWSNSRARS---RIDRALCSKGWMDTFHGVRQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGATGGTAATTCTGTTAACTGTTTGGAGGTGATGCTTGGTGTCTTCTCTGTTTCTATCAAGATTAAATGGAAGGATAAGGACTTAGGTTGGGTCACAGGTACGTA
TGGCCCGCCCAGGCCCAAAGGTAGGCAGGAGTTTTGGAATGAGCTTAGGGCCTTGTATGGGTTATGTGGGCATCATTGGTGCATTTTGGGTGACTTTAATGTTGTTTGTT
CCCCTTCAGAAAAGGCTTCGGGAGGGAGAGCTTCGAAGTCGATAAAGTCTTTTAATGAGTGGATTGAGGACTGCAGCTTTTTTGACCCCCCTCTTTCTAATGGGAGATTC
ACCTGGTCTAATAGTAGGGCACGCAGTAGGATCGATAGAGCTCTCTGCTCTAAGGGTTGGATGGATACCTTCCATGGTGTCAGACAATCCTTAGATATCAGTTATGGCAT
TCATCAGGTAGTATGTCTTCAGATTGAGAGGACCTTTTTTCCAATTAATGCATTCCGAAGGTGTTTCTCTCTACTGAGGGAGGTTGAACTTTGTACTCCTTCCGCAATAA
AGAATACGTTAGACAGAAGCTCTCTTTCTTATTGCTTTGGCTTTGCGCGTCCGTTGTCTGATCGTGAAACAACGGACCTCATGACTCTCCTTTCTTTGATTGGGGAAATC
GTTTTTAGTACCACTATGAAAGACATTCGAGTCTGGAGTCCCGACCCTTCCCTTGGGTTTTCTTGTCGATCCTTCTTCCGATGCCTTTTGGACCCTGTTTCCTCTGAGCC
GTCCATTTTCTCTTTATTGTGGAAGATGGCCGAGGAAGACCTCGATCATATGTTATGGAATTGCGCTTTTGCTAGGACAGTGTGGGATGAGTTCTTTGGCTCGTTCGGGT
TGCAGTTTGCCAGACACAGAGGCCTCGGAGAGACGATCGAGGAGTTCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTTTGTGGCAAGCTGGGATTTGTGCTATT
ATTTGGGGGTTGTGGGGTGAGAGAAACAATAGAACTTTTAGAGGGTTAGAGAGGGATCCTACTGAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGATGGTAATTCTGTTAACTGTTTGGAGGTGATGCTTGGTGTCTTCTCTGTTTCTATCAAGATTAAATGGAAGGATAAGGACTTAGGTTGGGTCACAGGTACGTA
TGGCCCGCCCAGGCCCAAAGGTAGGCAGGAGTTTTGGAATGAGCTTAGGGCCTTGTATGGGTTATGTGGGCATCATTGGTGCATTTTGGGTGACTTTAATGTTGTTTGTT
CCCCTTCAGAAAAGGCTTCGGGAGGGAGAGCTTCGAAGTCGATAAAGTCTTTTAATGAGTGGATTGAGGACTGCAGCTTTTTTGACCCCCCTCTTTCTAATGGGAGATTC
ACCTGGTCTAATAGTAGGGCACGCAGTAGGATCGATAGAGCTCTCTGCTCTAAGGGTTGGATGGATACCTTCCATGGTGTCAGACAATCCTTAGATATCAGTTATGGCAT
TCATCAGGTAGTATGTCTTCAGATTGAGAGGACCTTTTTTCCAATTAATGCATTCCGAAGGTGTTTCTCTCTACTGAGGGAGGTTGAACTTTGTACTCCTTCCGCAATAA
AGAATACGTTAGACAGAAGCTCTCTTTCTTATTGCTTTGGCTTTGCGCGTCCGTTGTCTGATCGTGAAACAACGGACCTCATGACTCTCCTTTCTTTGATTGGGGAAATC
GTTTTTAGTACCACTATGAAAGACATTCGAGTCTGGAGTCCCGACCCTTCCCTTGGGTTTTCTTGTCGATCCTTCTTCCGATGCCTTTTGGACCCTGTTTCCTCTGAGCC
GTCCATTTTCTCTTTATTGTGGAAGATGGCCGAGGAAGACCTCGATCATATGTTATGGAATTGCGCTTTTGCTAGGACAGTGTGGGATGAGTTCTTTGGCTCGTTCGGGT
TGCAGTTTGCCAGACACAGAGGCCTCGGAGAGACGATCGAGGAGTTCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTTTGTGGCAAGCTGGGATTTGTGCTATT
ATTTGGGGGTTGTGGGGTGAGAGAAACAATAGAACTTTTAGAGGGTTAGAGAGGGATCCTACTGAGGTTTGA
Protein sequenceShow/hide protein sequence
MWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELRALYGLCGHHWCILGDFNVVCSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRF
TWSNSRARSRIDRALCSKGWMDTFHGVRQSLDISYGIHQVVCLQIERTFFPINAFRRCFSLLREVELCTPSAIKNTLDRSSLSYCFGFARPLSDRETTDLMTLLSLIGEI
VFSTTMKDIRVWSPDPSLGFSCRSFFRCLLDPVSSEPSIFSLLWKMAEEDLDHMLWNCAFARTVWDEFFGSFGLQFARHRGLGETIEEFLPHPPFREQGKFLWQAGICAI
IWGLWGERNNRTFRGLERDPTEV