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Spg033796 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033796
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold13:34218169..34224552
RNA-Seq ExpressionSpg033796
SyntenySpg033796
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG52738.1 hypothetical protein EZV62_021907 [Acer yangbiense]4.8e-0439.1Show/hide
Query:  MAFSTFVFAILFASVAVSASAQSPGPAPAQSPAQRHPPTRTASPPSSRLGPTSPPKVSALPPIAKSHPPVLAPTAPPPAPPTAPVTSPATAIANPPELNP
        MA+S+FV  +L + VA SA AQ+PGPAP +SP    P   + +P S+   P   PKV A  P   + PP  + + PP + PT    +P     N P  NP
Subjt:  MAFSTFVFAILFASVAVSASAQSPGPAPAQSPAQRHPPTRTASPPSSRLGPTSPPKVSALPPIAKSHPPVLAPTAPPPAPPTAPVTSPATAIANPPELNP

Query:  PPPPPSAPSNGAASNDFRRCGYLAGVFLVVLWR
           P S P NGAA N     GY++G+F  V ++
Subjt:  PPPPPSAPSNGAASNDFRRCGYLAGVFLVVLWR
XP_021900554.1 classical arabinogalactan protein 10 [Carica papaya]6.2e-0440.29Show/hide
Query:  MAFSTFVFAILFASVAVSASAQSPGPAPAQSP--AQRHPPTRTASPPSSRLGPTSPPKVSALPPIAKSHPPVLAPTAP---PPAPPTAPVTSPATAIANP
        MA  TF+  +L A  + SA AQ+PG AP QSP  A   P  + A+P  S + P      +  P +A + PP  APT+P   PPAPPT+P ++P+T +   
Subjt:  MAFSTFVFAILFASVAVSASAQSPGPAPAQSP--AQRHPPTRTASPPSSRLGPTSPPKVSALPPIAKSHPPVLAPTAP---PPAPPTAPVTSPATAIANP

Query:  PELNPPP--PPPSAPSNGAASNDFRRCGYLAG-VFLVVL
        P ++ PP   P   P NGAA N     G  AG VF   L
Subjt:  PELNPPP--PPPSAPSNGAASNDFRRCGYLAG-VFLVVL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGCGACAGGCGAAGCGTGGAACTCCGACAGCGACTCGTATCGGTTTTGCAGGCAAGACCCACAGATCTACTCGAGGTCAAGAAATTAGTGGTTGATCTTCTTTT
GAACAGCGAGGACATGGAGGAAGTTGAGGTCTTTCTTGGAAAATATGGGGAAGACGAAGAAGAAGGGGAAGAAGAAGAAGAGAGCAAACGCCTGGTGATTGCTTGTGTTT
TGGGTGCTTCCGGCACCGGCCGCCGCCGTGGTGGGAATTTCGTGCCATTGCCGCCGTCGCCGCCGCCGCATGATCCTTTACTTGAAAGATTGTCCTTGAATATTCGTGGT
GGTATTTCTTCAAAGCAGCGTCTTGCTAGTCTCTCGGCTTCGACAATGGCCTTTTCTACCTTCGTCTTCGCGATACTCTTCGCTTCAGTAGCTGTTTCCGCCTCTGCTCA
GTCTCCGGGACCGGCGCCGGCACAATCACCGGCTCAGCGACATCCACCGACTAGGACCGCCAGTCCGCCATCGTCGAGGCTGGGTCCGACCTCGCCTCCAAAGGTTTCCG
CTCTCCCTCCGATCGCCAAGTCGCATCCGCCGGTACTCGCGCCGACCGCTCCTCCTCCAGCTCCGCCTACGGCTCCTGTAACCTCTCCGGCGACTGCGATCGCCAACCCT
CCGGAATTAAATCCACCACCACCACCACCGTCGGCTCCCAGTAACGGCGCCGCATCGAACGATTTTCGCCGCTGTGGATATCTTGCAGGAGTTTTCTTAGTTGTGTTGTG
GCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGCGACAGGCGAAGCGTGGAACTCCGACAGCGACTCGTATCGGTTTTGCAGGCAAGACCCACAGATCTACTCGAGGTCAAGAAATTAGTGGTTGATCTTCTTTT
GAACAGCGAGGACATGGAGGAAGTTGAGGTCTTTCTTGGAAAATATGGGGAAGACGAAGAAGAAGGGGAAGAAGAAGAAGAGAGCAAACGCCTGGTGATTGCTTGTGTTT
TGGGTGCTTCCGGCACCGGCCGCCGCCGTGGTGGGAATTTCGTGCCATTGCCGCCGTCGCCGCCGCCGCATGATCCTTTACTTGAAAGATTGTCCTTGAATATTCGTGGT
GGTATTTCTTCAAAGCAGCGTCTTGCTAGTCTCTCGGCTTCGACAATGGCCTTTTCTACCTTCGTCTTCGCGATACTCTTCGCTTCAGTAGCTGTTTCCGCCTCTGCTCA
GTCTCCGGGACCGGCGCCGGCACAATCACCGGCTCAGCGACATCCACCGACTAGGACCGCCAGTCCGCCATCGTCGAGGCTGGGTCCGACCTCGCCTCCAAAGGTTTCCG
CTCTCCCTCCGATCGCCAAGTCGCATCCGCCGGTACTCGCGCCGACCGCTCCTCCTCCAGCTCCGCCTACGGCTCCTGTAACCTCTCCGGCGACTGCGATCGCCAACCCT
CCGGAATTAAATCCACCACCACCACCACCGTCGGCTCCCAGTAACGGCGCCGCATCGAACGATTTTCGCCGCTGTGGATATCTTGCAGGAGTTTTCTTAGTTGTGTTGTG
GCGGTGA
Protein sequenceShow/hide protein sequence
MSSDRRSVELRQRLVSVLQARPTDLLEVKKLVVDLLLNSEDMEEVEVFLGKYGEDEEEGEEEEESKRLVIACVLGASGTGRRRGGNFVPLPPSPPPHDPLLERLSLNIRG
GISSKQRLASLSASTMAFSTFVFAILFASVAVSASAQSPGPAPAQSPAQRHPPTRTASPPSSRLGPTSPPKVSALPPIAKSHPPVLAPTAPPPAPPTAPVTSPATAIANP
PELNPPPPPPSAPSNGAASNDFRRCGYLAGVFLVVLWR