; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg033856 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033856
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNudix hydrolase 16
Genome locationscaffold13:35089444..35092167
RNA-Seq ExpressionSpg033856
SyntenySpg033856
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR000086 - NUDIX hydrolase domain
IPR015797 - NUDIX hydrolase-like domain superfamily
IPR020084 - NUDIX hydrolase, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598656.1 RNA pseudouridine synthase 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]9.2e-4396.67Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDE+SDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREA+EEAGVRG+LM
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

XP_008445383.1 PREDICTED: nudix hydrolase 16, mitochondrial isoform X1 [Cucumis melo]3.2e-4398.89Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREA+EEAGVRGELM
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

XP_011657455.1 nudix hydrolase 16, mitochondrial isoform X2 [Cucumis sativus]3.2e-4398.89Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREA+EEAGVRGELM
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

XP_022961746.1 nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita moschata]7.1e-4397.78Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREA+EEAGVRG+LM
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

XP_038886652.1 nudix hydrolase 16, mitochondrial isoform X2 [Benincasa hispida]3.2e-4398.89Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREA+EEAGVRGELM
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

TrEMBL top hitse value%identityAlignment
A0A1S3BDF1 nudix hydrolase 16, mitochondrial isoform X11.5e-4398.89Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREA+EEAGVRGELM
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

A0A5A7VFY1 Nudix hydrolase 161.5e-4398.89Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREA+EEAGVRGELM
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

A0A6J1HB74 nudix hydrolase 16, mitochondrial-like isoform X13.4e-4397.78Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREA+EEAGVRG+LM
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

A0A6J1K726 nudix hydrolase 16, mitochondrial-like isoform X15.8e-4395.56Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        MSDLVARTGRHQQRYDAGCRL+AGCIPFRYRSSDGSSDE+SDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREA+EEAGVRG+LM
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

A0A6J1KKB0 nudix hydrolase 16, mitochondrial-like4.9e-4295.56Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        MSDLVARTGR QQRYDAGCRLIAGCIPFRYRSS+GSSDE+SDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREA+EEAGVRGELM
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

SwissProt top hitse value%identityAlignment
Q52K88 Nudix hydrolase 13, mitochondrial7.9e-2157.61Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRY---RSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGEL
        MS+L ARTGR  QRYD   RL++GCIP+R       D +S +  +K ++VLMI +P+   L+FPKGGWE+DETV EAA REAMEEAGV+G L
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRY---RSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGEL

Q93ZY7 Nudix hydrolase 12, mitochondrial3.9e-2054.35Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVV---EVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGEL
        MS L +RTGR +QRYD   RL++GCIP+R   +D + ++     V   EVLM+ +P+   L+FPKGGWE+DETV EAA REA+EEAGV+G L
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVV---EVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGEL

Q9LE73 Nudix hydrolase 46.0e-2153.33Show/hide
Query:  LVARTGRHQQRYD-AGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELMVK
        LV+RTGR  QRYD AG R + GC+P+RY+  + +   +  +V++VL++    G G+LFPKGGWE DE++EEAA+RE +EEAGV GEL  K
Subjt:  LVARTGRHQQRYD-AGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELMVK

Q9LHK1 Nudix hydrolase 16, mitochondrial2.2e-3173.33Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        M DLVARTGR QQRY+ G RL+AGCIPFRY +SD   +  S KV++VLMI + SGPGLLFPKGGWENDETV EAA REA+EEAGVRG LM
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

Q9LQU5 Nudix hydrolase 18, mitochondrial5.6e-1958.62Show/hide
Query:  LVARTGRHQQRYDAGCRLIAGCIPFRYR-SSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGEL
        LV+RTGR  QRY+ G R + GCIP+R + SSDG+   ISD+  EVL+I +  G  L+FPKGGWE DE+VEEAA RE++EEAGV G +
Subjt:  LVARTGRHQQRYDAGCRLIAGCIPFRYR-SSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGEL

Arabidopsis top hitse value%identityAlignment
AT1G18300.1 nudix hydrolase homolog 44.3e-2253.33Show/hide
Query:  LVARTGRHQQRYD-AGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELMVK
        LV+RTGR  QRYD AG R + GC+P+RY+  + +   +  +V++VL++    G G+LFPKGGWE DE++EEAA+RE +EEAGV GEL  K
Subjt:  LVARTGRHQQRYD-AGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELMVK

AT3G12600.1 nudix hydrolase homolog 161.6e-3273.33Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        M DLVARTGR QQRY+ G RL+AGCIPFRY +SD   +  S KV++VLMI + SGPGLLFPKGGWENDETV EAA REA+EEAGVRG LM
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

AT3G12600.2 nudix hydrolase homolog 163.4e-2770.89Show/hide
Query:  QQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM
        +QRY+ G RL+AGCIPFRY +SD   +  S KV++VLMI + SGPGLLFPKGGWENDETV EAA REA+EEAGVRG LM
Subjt:  QQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELM

AT3G26690.1 nudix hydrolase homolog 135.6e-2257.61Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRY---RSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGEL
        MS+L ARTGR  QRYD   RL++GCIP+R       D +S +  +K ++VLMI +P+   L+FPKGGWE+DETV EAA REAMEEAGV+G L
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRY---RSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGEL

AT3G26690.2 nudix hydrolase homolog 135.6e-2257.61Show/hide
Query:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRY---RSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGEL
        MS+L ARTGR  QRYD   RL++GCIP+R       D +S +  +K ++VLMI +P+   L+FPKGGWE+DETV EAA REAMEEAGV+G L
Subjt:  MSDLVARTGRHQQRYDAGCRLIAGCIPFRY---RSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTGTATTCCATTTAGGTATAGAAGTTCCGATGGCAGTAG
TGATGAAATTTCAGATAAAGTAGTGGAGGTGCTTATGATTGACACACCTAGTGGACCGGGCCTTTTGTTCCCAAAGGGAGGCTGGGAGAATGACGAGACAGTGGAGGAGG
CTGCTGTAAGGGAAGCTATGGAAGAAGCGGGTGTTCGTGGTGAACTTATGGTGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTGTATTCCATTTAGGTATAGAAGTTCCGATGGCAGTAG
TGATGAAATTTCAGATAAAGTAGTGGAGGTGCTTATGATTGACACACCTAGTGGACCGGGCCTTTTGTTCCCAAAGGGAGGCTGGGAGAATGACGAGACAGTGGAGGAGG
CTGCTGTAAGGGAAGCTATGGAAGAAGCGGGTGTTCGTGGTGAACTTATGGTGAAATAG
Protein sequenceShow/hide protein sequence
MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGELMVK