; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg033865 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033865
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiondouble-stranded RNA-binding protein 1-like
Genome locationscaffold13:33477955..33481671
RNA-Seq ExpressionSpg033865
SyntenySpg033865
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0009735 - response to cytokinin (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0010267 - production of ta-siRNAs involved in RNA interference (biological process)
GO:0010305 - leaf vascular tissue pattern formation (biological process)
GO:0010589 - leaf proximal/distal pattern formation (biological process)
GO:0016075 - rRNA catabolic process (biological process)
GO:0031054 - pre-miRNA processing (biological process)
GO:0035279 - mRNA cleavage involved in gene silencing by miRNA (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0010445 - nuclear dicing body (cellular component)
GO:0042802 - identical protein binding (molecular function)
GO:0035198 - miRNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
InterPro domainsIPR044451 - AtDRB-like, second double-stranded RNA binding domain, plant
IPR044450 - AtDRB-like, first double-stranded RNA binding domain, plant
IPR031147 - Double-stranded RNA-binding protein
IPR014720 - Double-stranded RNA-binding domain
IPR011907 - Ribonuclease III


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065099.1 double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo var. makuwa]6.2e-14880.63Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG
        MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIV DVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHV+ PVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG

Query:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIP-CKRKE-ADCS
        LCKNLLQEYAQKMN+AIPLYQCQKDDGPGRG LFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP SLS KSV+QVQLTVIP CKRKE ADCS
Subjt:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIP-CKRKE-ADCS

Query:  VKPKTAGAPKTKKGRFKK-MSKKKGFMNGDPRFTSNLELNIDRSNLEPFATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ
        V PK+  AP+ KKGRFK+ + +K+GF NG      N   NIDRS LEPF T  VQ+PG    V+ +KDTL NSE R T+LSSS++D LV+N QSD PP  
Subjt:  VKPKTAGAPKTKKGRFKK-MSKKKGFMNGDPRFTSNLELNIDRSNLEPFATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ

Query:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGESQ
        N NFGN  SG LNSNQ+N ATS+VMSFPL+DVQPTC EV NVA GVTGE Q
Subjt:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGESQ

KAG6598726.1 Double-stranded RNA-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia]6.6e-15081.95Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG
        MPAKD+FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKS+DLNPHV+LPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG

Query:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKE-ADCSV
        LCKNLLQEYAQKMN+AIPLYQC+KDD  GR PLFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCPTSL E SV+QVQLTVIPCKRKE ADCSV
Subjt:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKE-ADCSV

Query:  KPKTAGAPKTKKGRFKKM-SKKKGFMNGDPRFTSNLELNIDRSNLEPF-ATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ
        KPKTAGAP+ KKGRFKK+ SKKKG  NG P    NLE N DRS+ EP   TGV  VPGLGESVE +KDT+ NSEY+ T+LSSS +DV+V+N QSDT    
Subjt:  KPKTAGAPKTKKGRFKKM-SKKKGFMNGDPRFTSNLELNIDRSNLEPF-ATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ

Query:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGE
        NGNFGN      +SNQ+N +TSDVMSFPL DVQ TCGEV NVATGVTGE
Subjt:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGE

KAG7029667.1 Double-stranded RNA-binding protein 1 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-15182.52Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG
        MPAKD+FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKS+DLNPHV+LPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG

Query:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKE-ADCSV
        LCKNLLQEYAQKMN+AIPLYQC+KDD  GR PLFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCPTSL E SV+QVQLTVIPCKRKE ADCSV
Subjt:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKE-ADCSV

Query:  KPKTAGAPKTKKGRFKKM-SKKKGFMNGDPRFTSNLELNIDRSNLEPF-ATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ
        KPKTAGAP+ KKGRFKK+ SKKKG  NG P    NLE N DRS+ EP   TGV  VPGLGESVE +KDT+ NSEY+ T+LSSS +DVLV+N QSDTP   
Subjt:  KPKTAGAPKTKKGRFKKM-SKKKGFMNGDPRFTSNLELNIDRSNLEPF-ATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ

Query:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGE
        NGNFGN      +SNQ+N +TSDVMSFPL DVQ TCGEV NVATGVTGE
Subjt:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGE

XP_022962385.1 double-stranded RNA-binding protein 1-like [Cucurbita moschata]1.6e-15182.81Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG
        MPAKD+FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKS+DLNPHV+LPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG

Query:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKE-ADCSV
        LCKNLLQEYAQKMN+AIPLYQC+KDD  GR PLFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCPTSL E SV+QVQLTVIPCKRKE ADCSV
Subjt:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKE-ADCSV

Query:  KPKTAGAPKTKKGRFKKM-SKKKGFMNGDPRFTSNLELNIDRSNLEPFAT-GVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ
        KPKTAGAP+ KKGRFKK+ SKKKG  NG P    NLE N DRS+ EP  T GV  VPGLGESVE +KDT+ NSEY+ T+LSSS +DVLV+N QSDTP   
Subjt:  KPKTAGAPKTKKGRFKKM-SKKKGFMNGDPRFTSNLELNIDRSNLEPFAT-GVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ

Query:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGE
        NGNFGN    A +SNQ+N +TSDVMSFPL DVQ TCGEV NVATGVTGE
Subjt:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGE

XP_023545931.1 double-stranded RNA-binding protein 1-like [Cucurbita pepo subsp. pepo]1.6e-15182.52Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG
        MPAKD+FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKS+DLNPHV+LPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG

Query:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKE-ADCSV
        LCKNLLQEYAQKMN+AIPLYQC+KDD  GR PLFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCPTSL E SV+QVQLTVIPCKRKE ADCSV
Subjt:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKE-ADCSV

Query:  KPKTAGAPKTKKGRFKK-MSKKKGFMNGDPRFTSNLELNIDRSNLEPF-ATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ
        KPKTAGAP+ KKGRFKK +SKKKG  NG P    NLE + DRS+ EP   TGV  VPGLGESVE +KDT+ NSEY+ T+LSSS +DVLV+N QSDTPP  
Subjt:  KPKTAGAPKTKKGRFKK-MSKKKGFMNGDPRFTSNLELNIDRSNLEPF-ATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ

Query:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGE
        NGNFGN      +SNQ+N +TSDVMSFPL DVQ TCGEV NVATGVTGE
Subjt:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGE

TrEMBL top hitse value%identityAlignment
A0A0A0LRU8 Uncharacterized protein2.1e-14679.44Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG
        MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIV DVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHV+ PVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG

Query:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIP-CKRKE-ADCS
        LCKNLLQEYAQKMN+AIPLYQCQKDDGPGRG LFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP SLSEKSV+QVQLTVIP CKRKE ADCS
Subjt:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIP-CKRKE-ADCS

Query:  VKPKTAGAPKTKKGRFKKMS----KKKGFMNGDPRFTSNLEL-NIDRSNLEPFATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDT
        VKPK+  +P+ KKGRFK+      + + F+NG      NL+  N DRS LEPF TGVVQ+PG    V+ +KDTL NSE R T+LSS+++DVLV+N QSD 
Subjt:  VKPKTAGAPKTKKGRFKKMS----KKKGFMNGDPRFTSNLEL-NIDRSNLEPFATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDT

Query:  PPPQNGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGESQ
        P   NGN GNG SG  NSNQ+N ATS+VMS PL+DVQPTC EV NVA GVTGE Q
Subjt:  PPPQNGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGESQ

A0A1S3BBH0 double-stranded RNA-binding protein 1 isoform X13.3e-14780.34Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG
        MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIV DVRY+SLPGFSNRKAAEQSAAEVALMELSKSSDLNPHV+ PVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG

Query:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIP-CKRKE-ADCS
        LCKNLLQEYAQKMN+AIPLYQCQKDDGPGRG LFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP SLS KS++ +QLTVIP CKRKE ADCS
Subjt:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIP-CKRKE-ADCS

Query:  VKPKTAGAPKTKKGRFKK-MSKKKGFMNGDPRFTSNLELNIDRSNLEPFATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ
        V PK+  AP+ KKGRFK+ +S+K+GF NG      N   NIDRS LEPF T  VQ+PG    V+ +KDTL NSE R T+LSSS++DVLV+N QSD PP  
Subjt:  VKPKTAGAPKTKKGRFKK-MSKKKGFMNGDPRFTSNLELNIDRSNLEPFATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ

Query:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGESQ
        N NFGNG SG LNSNQ+N ATS+VMSFPL+DVQPTC EV NVA GVTGE Q
Subjt:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGESQ

A0A5A7VI00 Double-stranded RNA-binding protein 1 isoform X13.0e-14880.63Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG
        MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIV DVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHV+ PVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG

Query:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIP-CKRKE-ADCS
        LCKNLLQEYAQKMN+AIPLYQCQKDDGPGRG LFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP SLS KSV+QVQLTVIP CKRKE ADCS
Subjt:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIP-CKRKE-ADCS

Query:  VKPKTAGAPKTKKGRFKK-MSKKKGFMNGDPRFTSNLELNIDRSNLEPFATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ
        V PK+  AP+ KKGRFK+ + +K+GF NG      N   NIDRS LEPF T  VQ+PG    V+ +KDTL NSE R T+LSSS++D LV+N QSD PP  
Subjt:  VKPKTAGAPKTKKGRFKK-MSKKKGFMNGDPRFTSNLELNIDRSNLEPFATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ

Query:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGESQ
        N NFGN  SG LNSNQ+N ATS+VMSFPL+DVQPTC EV NVA GVTGE Q
Subjt:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGESQ

A0A6J1HEW7 double-stranded RNA-binding protein 1-like7.6e-15282.81Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG
        MPAKD+FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKS+DLNPHV+LPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG

Query:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKE-ADCSV
        LCKNLLQEYAQKMN+AIPLYQC+KDD  GR PLFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCPTSL E SV+QVQLTVIPCKRKE ADCSV
Subjt:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKE-ADCSV

Query:  KPKTAGAPKTKKGRFKKM-SKKKGFMNGDPRFTSNLELNIDRSNLEPFAT-GVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ
        KPKTAGAP+ KKGRFKK+ SKKKG  NG P    NLE N DRS+ EP  T GV  VPGLGESVE +KDT+ NSEY+ T+LSSS +DVLV+N QSDTP   
Subjt:  KPKTAGAPKTKKGRFKKM-SKKKGFMNGDPRFTSNLELNIDRSNLEPFAT-GVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQ

Query:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGE
        NGNFGN    A +SNQ+N +TSDVMSFPL DVQ TCGEV NVATGVTGE
Subjt:  NGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGE

A0A6J1K8Y3 double-stranded RNA-binding protein 1-like1.2e-14480.29Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG
        MPAKD+FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKS+DLNPHV+ PVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG

Query:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKE-ADCSV
        LCKNLLQEYAQKMN+AIPLYQC+KDD  GR  LFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCPTSL E SV+QVQLTVIPCKRKE AD SV
Subjt:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKE-ADCSV

Query:  KPKTAGAPKTKKGRFKK-MSKKKGFMNGDPRFTSNLELNIDR-SNLEPF-ATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPP
        KPKT GAP+ KKGRFKK +SKKK   +G P    NLE N DR S+ EP   TGV  VPGLGESVE +KDT+ NSEY+ T+LSSS +DVLV+N QSDTP  
Subjt:  KPKTAGAPKTKKGRFKK-MSKKKGFMNGDPRFTSNLELNIDR-SNLEPF-ATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPP

Query:  QNGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGE
         NGN GN      +SNQ+N +TSDVMSFPLSDVQ TCGEV NVATG+TGE
Subjt:  QNGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQPTCGEVDNVATGVTGE

SwissProt top hitse value%identityAlignment
O04492 Double-stranded RNA-binding protein 12.7e-6964.25Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG
        M + D   GVSNCYVFKSRLQEYAQK  LPTPVYE +KEGPSH+  F STVI+  VRY+SLPGF NRKAAEQSAAEVAL EL+KSS+L+  V+ PVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG

Query:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKEADCSVK
        LCKNLLQEYAQKMNYAIPLYQCQK +  GR   F+CTVEIGGI+Y GA  +TKK+AEI A RTALLAIQS   + +  +    QLTV+PC++K    ++ 
Subjt:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKEADCSVK

Query:  PK-TAGAPKTKKGRFKKMSKK
         K T    K +K +FKK ++K
Subjt:  PK-TAGAPKTKKGRFKKMSKK

Q0DJA3 Double-stranded RNA-binding protein 33.8e-6062.73Show/hide
Query:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEY
        V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++ +  Y SLPGFSNRKAAEQSAAEVALME+ KS   N ++   V ETGLCKNLLQEY
Subjt:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEY

Query:  AQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVD-QVQLTVIPCKRKEADCSVKPKTAGAP-
        AQKMNYAIP Y C K    G  P F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ      SE S +   +  V+P KR   +   +P     P 
Subjt:  AQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVD-QVQLTVIPCKRKEADCSVKPKTAGAP-

Query:  KTKKGRFKKMSKKKGFMNGD
        K KKG FKK   K+ FM  D
Subjt:  KTKKGRFKKMSKKKGFMNGD

Q0DKP4 Double-stranded RNA-binding protein 21.3e-2339.87Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEYAQKMN
        ++K++LQE AQ+     P Y  I+EGP H P F +TV      ++S    S  + AE +AAEVAL ELSK    +      + ETG+ KNLLQE A +  
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEYAQKMN

Query:  YAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP
          +P+Y   +  GPG  P+F+CTVE+ G+ + G   KTKK+A+  AA  A   ++  P
Subjt:  YAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP

Q0IQN6 Double-stranded RNA-binding protein 81.3e-6062.73Show/hide
Query:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEY
        V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++ +  YDSLPGF NRKAAEQSAAEVALME+ KS   N ++   V ETGLCKNLLQEY
Subjt:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEY

Query:  AQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVD-QVQLTVIPCKRKEADCSVKPKTAGAP-
        AQKMNYAIP Y C K    G  P F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ      SE S +   +  V+P KR   +   +P     P 
Subjt:  AQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVD-QVQLTVIPCKRKEADCSVKPKTAGAP-

Query:  KTKKGRFKKMSKKKGFMNGD
        K KKG FKK   K+ FM  D
Subjt:  KTKKGRFKKMSKKKGFMNGD

Q0IV63 Double-stranded RNA-binding protein 73.8e-6062.73Show/hide
Query:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEY
        V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++ +  YDSLPGF NRKAAEQSAAEVALME+ KS   N ++   V ETGLCKNLLQEY
Subjt:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEY

Query:  AQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVD-QVQLTVIPCKRKEADCSVKPKTAGAP-
        AQKMNYAIP Y C K    G  P F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ      SE S +   +  V+P KR   +    P     P 
Subjt:  AQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVD-QVQLTVIPCKRKEADCSVKPKTAGAP-

Query:  KTKKGRFKKMSKKKGFMNGD
        K KKG FKK   K+ FM  D
Subjt:  KTKKGRFKKMSKKKGFMNGD

Arabidopsis top hitse value%identityAlignment
AT1G09700.1 dsRNA-binding domain-like superfamily protein1.9e-7064.25Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG
        M + D   GVSNCYVFKSRLQEYAQK  LPTPVYE +KEGPSH+  F STVI+  VRY+SLPGF NRKAAEQSAAEVAL EL+KSS+L+  V+ PVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETG

Query:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKEADCSVK
        LCKNLLQEYAQKMNYAIPLYQCQK +  GR   F+CTVEIGGI+Y GA  +TKK+AEI A RTALLAIQS   + +  +    QLTV+PC++K    ++ 
Subjt:  LCKNLLQEYAQKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKEADCSVK

Query:  PK-TAGAPKTKKGRFKKMSKK
         K T    K +K +FKK ++K
Subjt:  PK-TAGAPKTKKGRFKKMSKK

AT2G28380.1 dsRNA-binding protein 27.3e-2236.87Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEYAQKMN
        ++K++LQE AQ+     P Y  I+EGP H P F +TV      ++S    S  + AE SAAEVAL  LS     +      + ETG+ KNLLQE AQ++ 
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEYAQKMN

Query:  YAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTA-----LLAIQSCPTSLSEKSVDQVQLTVI
          +P Y   +  G G  P+F+ TVE+ GI + G  AK KK+AE  AA  A      LA ++  +    +++D+++  +I
Subjt:  YAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTA-----LLAIQSCPTSLSEKSVDQVQLTVI

AT3G26932.1 dsRNA-binding protein 31.9e-2234.3Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEYAQKMN
        ++K++LQE AQ+     P Y   +EGP H P F ++V      ++S    S  + AE SAAEVAL  LS            + ETG+ KNLLQE A +  
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEYAQKMN

Query:  YAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKEADCSVKPKTAGAPKTKKGRF
          +P+Y   +  GPG  P FSCTVE+ G+ + G  AKTKK+AE  AA  A  +++  P           +L  +  + KE +   +  +   PK  K R 
Subjt:  YAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKEADCSVKPKTAGAPKTKKGRF

Query:  KKMSKKK
           S+++
Subjt:  KKMSKKK

AT3G26932.2 dsRNA-binding protein 31.9e-2234.3Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEYAQKMN
        ++K++LQE AQ+     P Y   +EGP H P F ++V      ++S    S  + AE SAAEVAL  LS            + ETG+ KNLLQE A +  
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEYAQKMN

Query:  YAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKEADCSVKPKTAGAPKTKKGRF
          +P+Y   +  GPG  P FSCTVE+ G+ + G  AKTKK+AE  AA  A  +++  P           +L  +  + KE +   +  +   PK  K R 
Subjt:  YAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKEADCSVKPKTAGAPKTKKGRF

Query:  KKMSKKK
           S+++
Subjt:  KKMSKKK

AT5G41070.1 dsRNA-binding protein 54.0e-2036.61Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEYAQKMN
        ++K++LQE AQ+     P Y  I+EGP H P F ++V      ++S    S  + AE +AAEV+L  LS            + ETG+ KNLLQE A +  
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEYAQKMN

Query:  YAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTA---LLAIQSCPTSLSEKSVDQVQLTVIPCKRKE
          +P+Y   +  G    P FSCTVE+ G+ + G  AKTKK+AE  AA  A   L  + S  +   EK  + V   +   K KE
Subjt:  YAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTA---LLAIQSCPTSLSEKSVDQVQLTVIPCKRKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGCCAAGGACAACTTTCAAGGTGTTTCAAATTGCTATGTTTTCAAAAGTCGACTGCAGGAATATGCACAAAAGGTGGGACTTCCTACACCTGTATACGAGACTAT
CAAAGAAGGTCCATCGCATGAGCCAACCTTTCATTCTACGGTCATCGTTAAAGATGTTAGATATGACTCTTTACCTGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAG
CTGCTGAAGTAGCTCTCATGGAGCTGTCGAAATCTAGCGATCTTAATCCTCATGTCACTCTACCTGTGCATGAAACTGGACTGTGCAAAAATCTGCTTCAGGAATATGCA
CAGAAGATGAACTATGCAATCCCACTATATCAGTGCCAAAAGGATGATGGTCCAGGAAGAGGACCCCTTTTCTCATGTACAGTAGAAATAGGCGGGATCCGCTACATTGG
TGCTGTAGCTAAAACAAAGAAAGAGGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATCCAGTCTTGCCCGACTTCGTTGTCTGAGAAATCTGTTGATCAAGTTC
AGCTCACTGTGATCCCATGCAAGAGGAAAGAAGCAGATTGCTCAGTTAAACCAAAGACTGCTGGAGCACCCAAAACAAAGAAAGGCCGATTTAAAAAGATGTCAAAGAAG
AAAGGCTTCATGAATGGAGATCCCAGATTCACAAGCAATTTGGAGTTGAACATTGATAGATCAAACTTGGAACCTTTTGCGACTGGCGTCGTTCAGGTGCCAGGTTTAGG
GGAATCTGTTGAATTTTCCAAGGATACCTTGCAGAATTCTGAATATAGAATGACAAACCTAAGCTCAAGTGACGATGATGTACTGGTCACTAACACCCAAAGCGACACGC
CTCCGCCCCAAAATGGTAATTTTGGAAACGGTCATTCGGGTGCTCTTAATTCCAATCAAATGAACTCTGCAACCTCTGATGTTATGAGTTTTCCTCTCTCTGACGTTCAA
CCTACTTGTGGTGAAGTGGATAATGTGGCCACCGGAGTAACAGGGGAGAGTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGCCAAGGACAACTTTCAAGGTGTTTCAAATTGCTATGTTTTCAAAAGTCGACTGCAGGAATATGCACAAAAGGTGGGACTTCCTACACCTGTATACGAGACTAT
CAAAGAAGGTCCATCGCATGAGCCAACCTTTCATTCTACGGTCATCGTTAAAGATGTTAGATATGACTCTTTACCTGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAG
CTGCTGAAGTAGCTCTCATGGAGCTGTCGAAATCTAGCGATCTTAATCCTCATGTCACTCTACCTGTGCATGAAACTGGACTGTGCAAAAATCTGCTTCAGGAATATGCA
CAGAAGATGAACTATGCAATCCCACTATATCAGTGCCAAAAGGATGATGGTCCAGGAAGAGGACCCCTTTTCTCATGTACAGTAGAAATAGGCGGGATCCGCTACATTGG
TGCTGTAGCTAAAACAAAGAAAGAGGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATCCAGTCTTGCCCGACTTCGTTGTCTGAGAAATCTGTTGATCAAGTTC
AGCTCACTGTGATCCCATGCAAGAGGAAAGAAGCAGATTGCTCAGTTAAACCAAAGACTGCTGGAGCACCCAAAACAAAGAAAGGCCGATTTAAAAAGATGTCAAAGAAG
AAAGGCTTCATGAATGGAGATCCCAGATTCACAAGCAATTTGGAGTTGAACATTGATAGATCAAACTTGGAACCTTTTGCGACTGGCGTCGTTCAGGTGCCAGGTTTAGG
GGAATCTGTTGAATTTTCCAAGGATACCTTGCAGAATTCTGAATATAGAATGACAAACCTAAGCTCAAGTGACGATGATGTACTGGTCACTAACACCCAAAGCGACACGC
CTCCGCCCCAAAATGGTAATTTTGGAAACGGTCATTCGGGTGCTCTTAATTCCAATCAAATGAACTCTGCAACCTCTGATGTTATGAGTTTTCCTCTCTCTGACGTTCAA
CCTACTTGTGGTGAAGTGGATAATGTGGCCACCGGAGTAACAGGGGAGAGTCAGTGA
Protein sequenceShow/hide protein sequence
MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVTLPVHETGLCKNLLQEYA
QKMNYAIPLYQCQKDDGPGRGPLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSEKSVDQVQLTVIPCKRKEADCSVKPKTAGAPKTKKGRFKKMSKK
KGFMNGDPRFTSNLELNIDRSNLEPFATGVVQVPGLGESVEFSKDTLQNSEYRMTNLSSSDDDVLVTNTQSDTPPPQNGNFGNGHSGALNSNQMNSATSDVMSFPLSDVQ
PTCGEVDNVATGVTGESQ