; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg033873 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033873
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:33413352..33414864
RNA-Seq ExpressionSpg033873
SyntenySpg033873
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH00303.1 Ribonuclease H-like superfamily protein [Prunus dulcis]3.2e-2127.22Show/hide
Query:  KEESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRP--IDWWRALSESLSEEERI-----WAVVIIWELWSYRNRILSSGL---PADA-SHLGRQIE
        ++E+  H+ + C F++++W        PL    R       +  W+ L E      R+         ++W +W  RN ++ +G+   P DA + L  Q++
Subjt:  KEESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRP--IDWWRALSESLSEEERI-----WAVVIIWELWSYRNRILSSGL---PADA-SHLGRQIE

Query:  ----CKIKEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYL
              +     + + GA   S      V+   WS PP   +K+N D +W ++ G GGVGW++RD  GC I+AG     +  S  + EA  ++E L   L
Subjt:  ----CKIKEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYL

Query:  KLGLSAPVMVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLARNAARLSSSRSQLLAASSSFPVSFCFLRDPSSSSP
        +LG    V V+SD++S+IK LN+E +   E   IL D+  L    H + F + PR+ N  AH +A  A R+    S                        
Subjt:  KLGLSAPVMVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLARNAARLSSSRSQLLAASSSFPVSFCFLRDPSSSSP

Query:  EDCFFGKDSFLPLWLFSAIIEDSVCSV
               D   P WLF+ +  D  CS+
Subjt:  EDCFFGKDSFLPLWLFSAIIEDSVCSV

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]1.3e-2231.48Show/hide
Query:  ESSSHVVWNCKFSKSIWLNFLPNLGPL------------FSGCREAWRPIDWWRALSESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIEC
        E+ SHV+  CK ++ IW     +L PL            FS  +E W         S S + E  +  +V  W +WS RN+ +  G  +D+  L  + + 
Subjt:  ESSSHVVWNCKFSKSIWLNFLPNLGPL------------FSGCREAWRPIDWWRALSESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIEC

Query:  KIKEHGDSSREGAYLSSHSAKN-FVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGL
         +K +   S+ G   + H AK+  +  + W PP  + LK+NVDA+ +++    G+G IVRD++G ++A G K+   R  + L EA  I  GL    ++  
Subjt:  KIKEHGDSSREGAYLSSHSAKN-FVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGL

Query:  SAPVMVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLARNAARLSSS
        S+ ++V+SD   V++ LN      +E H IL D+R       Q+ F + PR  N  AH LA+ A R SS+
Subjt:  SAPVMVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLARNAARLSSS

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]1.9e-2129.49Show/hide
Query:  RKEESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRPIDWWRALSESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSS
        +KEE++ H++W CK  K IW+N  P     F   R  W   ++W  L +   EEER  +++I  ++W  RN+ +  G+ ++     R I+  I  +  +S
Subjt:  RKEESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRPIDWWRALSESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSS

Query:  REGAYLSSHSAKNF--------VSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSA
                  +K+F         +   W PP  +S K+N DA+W ++    G+GWI+RD +G +I  G + I    +I  LE   I EGL   ++     
Subjt:  REGAYLSSHSAKNF--------VSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSA

Query:  PVMVKSDAISVIKALNR
        P+ ++SD++  I  L+R
Subjt:  PVMVKSDAISVIKALNR

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]9.2e-2131.6Show/hide
Query:  ESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWI
        +  S+E+    ++  W +W++RN ++  G  +  S + +Q+   + E   SS +     S   K   +   W PPP     +N DASW+     GG+GWI
Subjt:  ESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWI

Query:  VRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAH
        +R   G ++ AG++ +    ++ LLEAS I EGL N   LG+  P+ +++D+  V   LNR+  DL++T  ++++I  L D+   ++F    RE+N  AH
Subjt:  VRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAH

Query:  VLARNAARLSSS
         LA+ A+ L  S
Subjt:  VLARNAARLSSS

XP_024190234.1 uncharacterized protein LOC112194221 [Rosa chinensis]3.1e-2431.32Show/hide
Query:  RKEESSSHVVWNCKFSKSIW-LNFLPNLGPLFSGCREAWRP---IDWWRALSESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEH
        R+EE++ H +W+C +SK +W  +FL       +G  + WR    ID +  + ++ S+EE     VI W LW  RNR    G+  ++ H+       +   
Subjt:  RKEESSSHVVWNCKFSKSIW-LNFLPNLGPLFSGCREAWRP---IDWWRALSESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEH

Query:  GDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMV
         D+ R    ++  + +  V  K W PP    LK+N DA+ + +     +G +VRD +G L  AG K +P   SI  +EA  +  GL+ Y + G    ++V
Subjt:  GDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMV

Query:  KSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLARNAARLSSSR
        +SD+  VI ALN+  LDLS    +L DI+ L      + +    RE N  AH +A++A      R
Subjt:  KSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLARNAARLSSSR

TrEMBL top hitse value%identityAlignment
A0A4Y1R838 Ribonuclease H-like superfamily protein1.5e-2127.22Show/hide
Query:  KEESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRP--IDWWRALSESLSEEERI-----WAVVIIWELWSYRNRILSSGL---PADA-SHLGRQIE
        ++E+  H+ + C F++++W        PL    R       +  W+ L E      R+         ++W +W  RN ++ +G+   P DA + L  Q++
Subjt:  KEESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRP--IDWWRALSESLSEEERI-----WAVVIIWELWSYRNRILSSGL---PADA-SHLGRQIE

Query:  ----CKIKEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYL
              +     + + GA   S      V+   WS PP   +K+N D +W ++ G GGVGW++RD  GC I+AG     +  S  + EA  ++E L   L
Subjt:  ----CKIKEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYL

Query:  KLGLSAPVMVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLARNAARLSSSRSQLLAASSSFPVSFCFLRDPSSSSP
        +LG    V V+SD++S+IK LN+E +   E   IL D+  L    H + F + PR+ N  AH +A  A R+    S                        
Subjt:  KLGLSAPVMVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLARNAARLSSSRSQLLAASSSFPVSFCFLRDPSSSSP

Query:  EDCFFGKDSFLPLWLFSAIIEDSVCSV
               D   P WLF+ +  D  CS+
Subjt:  EDCFFGKDSFLPLWLFSAIIEDSVCSV

A0A6J1CQG0 uncharacterized protein LOC1110132162.2e-2032.82Show/hide
Query:  FSGCREAWRPIDWWRALSESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGD----------SSREGAYLSSHSAKNFVSHKNW
        +   R  W   D W  L   LS+EE   ++VI W++W  RNR +  G   D   L R I   I  + D          S +   YL        +    W
Subjt:  FSGCREAWRPIDWWRALSESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGD----------SSREGAYLSSHSAKNFVSHKNW

Query:  SPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAISVIKALNREALDLS
        S PP +  K+N DASW+ E  VGG+GWI+ D +G ++ AG+ KI ++  I  LE  TI  GL  ++ +   +P+ ++SD++ VI+ + +E +DL+
Subjt:  SPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAISVIKALNREALDLS

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X19.0e-2229.49Show/hide
Query:  RKEESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRPIDWWRALSESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSS
        +KEE++ H++W CK  K IW+N  P     F   R  W   ++W  L +   EEER  +++I  ++W  RN+ +  G+ ++     R I+  I  +  +S
Subjt:  RKEESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRPIDWWRALSESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSS

Query:  REGAYLSSHSAKNF--------VSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSA
                  +K+F         +   W PP  +S K+N DA+W ++    G+GWI+RD +G +I  G + I    +I  LE   I EGL   ++     
Subjt:  REGAYLSSHSAKNF--------VSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSA

Query:  PVMVKSDAISVIKALNR
        P+ ++SD++  I  L+R
Subjt:  PVMVKSDAISVIKALNR

A0A6J1DNV9 uncharacterized protein LOC1110224034.4e-2131.6Show/hide
Query:  ESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWI
        +  S+E+    ++  W +W++RN ++  G  +  S + +Q+   + E   SS +     S   K   +   W PPP     +N DASW+     GG+GWI
Subjt:  ESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWI

Query:  VRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAH
        +R   G ++ AG++ +    ++ LLEAS I EGL N   LG+  P+ +++D+  V   LNR+  DL++T  ++++I  L D+   ++F    RE+N  AH
Subjt:  VRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAH

Query:  VLARNAARLSSS
         LA+ A+ L  S
Subjt:  VLARNAARLSSS

A0A6J5WPU6 Reverse transcriptase domain-containing protein1.6e-1827.63Show/hide
Query:  KEESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRP--IDWWRALSESLSEEERI-----WAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIK
        ++E+ +H+ + C F+++ W        PL     +      I  W+ +  +L+  E       W V  +W +W  RN  +  G+ AD +     +  ++ 
Subjt:  KEESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRP--IDWWRALSESLSEEERI-----WAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIK

Query:  EHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPV
        E   ++++          +  +  +W  PP   LKVN DA+W+++   GGVGW++RDS G L+ AG +      S  ++E   I+  L       L+  +
Subjt:  EHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPV

Query:  MVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLA
        +V+SD+   I  LN  A   S+   I+ DIR+LV +L ++SF + PR  N  AH +A
Subjt:  MVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G33160.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein9.8e-0524.51Show/hide
Query:  IIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGS
        I+W LW+ RN +             +  +  ++E  ++    ++++SH         NW  P +  +K NVD S+ +    G  GWIVRD  G    AG 
Subjt:  IIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGS

Query:  KKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAIS------VIKALNREALDL---SETHI----ILKDIRELVDALHQISFGWCPRESNFPAH
                        I   + N L+    A +M      S        +  N+E  DL    + H      ++DI        Q  F W  R++N PA 
Subjt:  KKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAIS------VIKALNREALDL---SETHI----ILKDIRELVDALHQISFGWCPRESNFPAH

Query:  VLAR
        +LAR
Subjt:  VLAR

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.8e-1522.56Show/hide
Query:  ESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRPIDWWRALSESLSEEERIWAVV--IIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSSR
        E+ +H+++ C F++ +W        P        +  + W   L   + +  +I  +V  ++W LW  RN ++  G   DA  + R+     +E      
Subjt:  ESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRPIDWWRALSESLSEEERIWAVV--IIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSSR

Query:  EGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAI
             S    +  +S   W  PP   +K N DA+W  E    G+GWI+R+  G ++  G++ +P+  ++   E   ++  ++   +      ++ +SDA 
Subjt:  EGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAI

Query:  SVIKALNREALDLSET-HIILKDIRELVDALHQISFGWCPRESNFPAHVLARNAARLSSSRSQLLA
        +++  LN +  D   T    L+DI++L+    ++ F + PR  N  A  +AR +   S+   +L +
Subjt:  SVIKALNREALDLSET-HIILKDIRELVDALHQISFGWCPRESNFPAHVLARNAARLSSSRSQLLA

AT4G09775.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1)2.3e-0628.93Show/hide
Query:  IWELWSYRNRILSSGL---PADASHLGRQ-----IECKIKEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQG
        +W LW  RN  L   +   P   +  G Q     +E  I +  +S          S ++    K WSPPP+  LK N D+ +          WI+RDS G
Subjt:  IWELWSYRNRILSSGL---PADASHLGRQ-----IECKIKEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQG

Query:  CLIAAGSKKIPKRWSIPLLEA
         +I +G  K+ + +S    EA
Subjt:  CLIAAGSKKIPKRWSIPLLEA

AT4G29090.1 Ribonuclease H-like superfamily protein2.5e-1624.42Show/hide
Query:  EESSSHVVWNCKFSKSIW-LNFLP-NLGPLFSGCREAWRPIDWWRALSESLSEEERIWAVV--IIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGD
        +E+ +H+++ C F++  W ++ +P  LG  ++     +  + W   L     + E+   +V  ++W LW  RN ++  G   +A  + R+ E  ++E   
Subjt:  EESSSHVVWNCKFSKSIW-LNFLP-NLGPLFSGCREAWRPIDWWRALSESLSEEERIWAVV--IIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGD

Query:  SSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKS
         + E     +    N  S   W PPP   +K N DA+WN +    G+GW++R+ +G +   G++ +PK  S+   E   ++  +++  +   +  V+ +S
Subjt:  SSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKS

Query:  DAISVIKALNREAL--DLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLARNA
        D+  +I+ LN + +   L  T   ++D++ L+    ++ F + PRE N  A  +AR +
Subjt:  DAISVIKALNREAL--DLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLARNA

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-1025.47Show/hide
Query:  SEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKI-------KEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGG
        S  +R+   +  W +W    RI  SG     +H   + +  +       KE  D++      + +   +   +  WSPP    LK N DAS +    V G
Subjt:  SEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKI-------KEHGDSSREGAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGG

Query:  VGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESN
        +GWI+R+SQG +I  G  K   R +    E ST+   +      G    V+ + D  ++ + +N ++ +    H  L  I+  + +   I F +  RE N
Subjt:  VGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAISVIKALNREALDLSETHIILKDIRELVDALHQISFGWCPRESN

Query:  FPAHVLARNAAR
          A  LA+ A +
Subjt:  FPAHVLARNAAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAGGATAAGGGAAGGCTGCGCAAGGAAGAGTCCTCCTCCCATGTGGTGTGGAATTGTAAGTTCTCTAAATCGATTTGGTTGAATTTTCTCCCTAATTTGGGTCC
TCTTTTCTCTGGTTGCAGGGAAGCTTGGAGGCCAATCGATTGGTGGAGGGCTTTGTCCGAATCCTTATCAGAAGAGGAGAGGATATGGGCGGTCGTGATCATCTGGGAAC
TTTGGTCCTATCGTAACAGAATTTTATCTTCAGGATTGCCAGCAGACGCATCGCATTTGGGCAGACAAATTGAATGTAAAATCAAGGAGCATGGCGATAGTAGCAGGGAA
GGAGCTTACCTGTCGTCCCACAGCGCGAAGAACTTTGTGAGTCACAAGAATTGGTCTCCTCCCCCAGATTCGTCTCTGAAGGTTAACGTGGACGCCTCGTGGAATTCTGA
GCTTGGCGTTGGGGGAGTTGGTTGGATAGTCCGTGACTCCCAAGGGTGTTTGATTGCTGCTGGAAGCAAGAAAATTCCCAAGAGGTGGTCAATCCCACTGTTAGAAGCCT
CTACTATTAAAGAGGGGTTAGTGAATTACCTCAAATTAGGCCTCTCTGCCCCGGTGATGGTTAAGTCTGATGCCATATCTGTGATCAAGGCCCTCAATCGGGAAGCTTTG
GACCTTTCTGAAACTCATATCATCTTGAAGGATATCCGGGAATTGGTCGATGCTCTCCATCAGATTAGCTTCGGTTGGTGCCCTAGAGAGAGTAATTTCCCTGCGCATGT
GTTGGCGCGCAATGCAGCTCGGTTGTCTTCGTCTCGTTCTCAACTGTTGGCTGCCTCTTCTAGTTTTCCTGTGTCCTTTTGTTTTCTCCGCGATCCCTCTTCTTCTTCCC
CGGAAGATTGTTTTTTTGGGAAGGACTCGTTTTTGCCTCTGTGGCTTTTCTCTGCTATAATTGAGGATTCTGTTTGTTCTGTTGCTCGTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAGGATAAGGGAAGGCTGCGCAAGGAAGAGTCCTCCTCCCATGTGGTGTGGAATTGTAAGTTCTCTAAATCGATTTGGTTGAATTTTCTCCCTAATTTGGGTCC
TCTTTTCTCTGGTTGCAGGGAAGCTTGGAGGCCAATCGATTGGTGGAGGGCTTTGTCCGAATCCTTATCAGAAGAGGAGAGGATATGGGCGGTCGTGATCATCTGGGAAC
TTTGGTCCTATCGTAACAGAATTTTATCTTCAGGATTGCCAGCAGACGCATCGCATTTGGGCAGACAAATTGAATGTAAAATCAAGGAGCATGGCGATAGTAGCAGGGAA
GGAGCTTACCTGTCGTCCCACAGCGCGAAGAACTTTGTGAGTCACAAGAATTGGTCTCCTCCCCCAGATTCGTCTCTGAAGGTTAACGTGGACGCCTCGTGGAATTCTGA
GCTTGGCGTTGGGGGAGTTGGTTGGATAGTCCGTGACTCCCAAGGGTGTTTGATTGCTGCTGGAAGCAAGAAAATTCCCAAGAGGTGGTCAATCCCACTGTTAGAAGCCT
CTACTATTAAAGAGGGGTTAGTGAATTACCTCAAATTAGGCCTCTCTGCCCCGGTGATGGTTAAGTCTGATGCCATATCTGTGATCAAGGCCCTCAATCGGGAAGCTTTG
GACCTTTCTGAAACTCATATCATCTTGAAGGATATCCGGGAATTGGTCGATGCTCTCCATCAGATTAGCTTCGGTTGGTGCCCTAGAGAGAGTAATTTCCCTGCGCATGT
GTTGGCGCGCAATGCAGCTCGGTTGTCTTCGTCTCGTTCTCAACTGTTGGCTGCCTCTTCTAGTTTTCCTGTGTCCTTTTGTTTTCTCCGCGATCCCTCTTCTTCTTCCC
CGGAAGATTGTTTTTTTGGGAAGGACTCGTTTTTGCCTCTGTGGCTTTTCTCTGCTATAATTGAGGATTCTGTTTGTTCTGTTGCTCGTTGTTAA
Protein sequenceShow/hide protein sequence
MVEDKGRLRKEESSSHVVWNCKFSKSIWLNFLPNLGPLFSGCREAWRPIDWWRALSESLSEEERIWAVVIIWELWSYRNRILSSGLPADASHLGRQIECKIKEHGDSSRE
GAYLSSHSAKNFVSHKNWSPPPDSSLKVNVDASWNSELGVGGVGWIVRDSQGCLIAAGSKKIPKRWSIPLLEASTIKEGLVNYLKLGLSAPVMVKSDAISVIKALNREAL
DLSETHIILKDIRELVDALHQISFGWCPRESNFPAHVLARNAARLSSSRSQLLAASSSFPVSFCFLRDPSSSSPEDCFFGKDSFLPLWLFSAIIEDSVCSVARC