; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg033887 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033887
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranscription initiation factor TFIID subunit 10
Genome locationscaffold13:37472748..37476682
RNA-Seq ExpressionSpg033887
SyntenySpg033887
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0006413 - translational initiation (biological process)
GO:0016573 - histone acetylation (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
GO:1990841 - promoter-specific chromatin binding (molecular function)
InterPro domainsIPR003923 - Transcription initiation factor TFIID, 23-30kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598532.1 Transcription initiation factor TFIID subunit 10, partial [Cucurbita argyrosperma subsp. sororia]1.1e-6597.79Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

XP_008445293.1 PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis melo]5.1e-6698.53Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

XP_022132183.1 transcription initiation factor TFIID subunit 10 [Momordica charantia]2.3e-6697.06Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQ TE RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

XP_022962589.1 transcription initiation factor TFIID subunit 10 [Cucurbita moschata]1.1e-6597.79Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

XP_038886703.1 transcription initiation factor TFIID subunit 10 isoform X1 [Benincasa hispida]5.1e-6698.53Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

TrEMBL top hitse value%identityAlignment
A0A0A0LPV6 Transcription initiation factor TFIID subunit 101.2e-6597.06Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH+QQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

A0A1S3BD75 Transcription initiation factor TFIID subunit 102.5e-6698.53Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

A0A6J1BVJ5 Transcription initiation factor TFIID subunit 101.1e-6697.06Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQ TE RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

A0A6J1HHI7 Transcription initiation factor TFIID subunit 105.5e-6697.79Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

A0A6J1KB50 Transcription initiation factor TFIID subunit 105.5e-6697.79Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

SwissProt top hitse value%identityAlignment
O04173 Transcription initiation factor TFIID subunit 109.8e-6085.29Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH QQ+ E++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKH EYFADSPSTG+DP +R+E
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

Q12962 Transcription initiation factor TFIID subunit 104.3e-2350Show/hide
Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKH
        L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK +  A    +   + KD++  LTMEDL+ AL EYG+NVK 
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q8K0H5 Transcription initiation factor TFIID subunit 104.3e-2350Show/hide
Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKH
        L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK +  A    +   + KD++  LTMEDL+ AL EYG+NVK 
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q9U5W9 Transcription initiation factor TFIID subunit 104.1e-1839.47Show/hide
Query:  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAV------VKDKRDKQQKDKRLILTMEDLSKA
        +++ + E +  L +Y+PTIPD L  H L  +GF   D +++RLV+V+ QKF++D+A+DALQHCK R   +         K  K  KD++  L MEDL  A
Subjt:  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAV------VKDKRDKQQKDKRLILTMEDLSKA

Query:  LREYGVNVKHQEYF
        L ++G+ ++  +YF
Subjt:  LREYGVNVKHQEYF

Q9XZT7 Transcription initiation factor TFIID subunit 10b4.4e-2045.19Show/hide
Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR-QAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVK
        LS+F++ L +YTP IPD +  HYL   GFQ  D R++RL+++A QK+++D+  DALQH KAR            + KD++  LTMEDL  AL +YG+NV+
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR-QAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVK

Query:  HQEY
          +Y
Subjt:  HQEY

Arabidopsis top hitse value%identityAlignment
AT4G31720.1 TBP-associated factor II 156.9e-6185.29Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH QQ+ E++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKH EYFADSPSTG+DP +R+E
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

AT4G31720.2 TBP-associated factor II 156.9e-6185.29Show/hide
Query:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH QQ+ E++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LT
Subjt:  MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE
        MEDLSKALREYGVNVKH EYFADSPSTG+DP +R+E
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCATAGCCAACAAGCGACAGAGAGCAGGCACGACGATGACGCAGCGCTCTCCGAGTTTCTAGCATCTCTAATGGAGTATACTCCCACTATTCCAGACGAGTTGGT
GGAGCATTACTTAGGGAAGAGTGGATTTCAGTGTCCTGACGTTCGATTGATCAGACTTGTAGCTGTTGCCACGCAGAAGTTTGTTGCAGATGTTGCTAGTGATGCTCTCC
AGCATTGTAAGGCAAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGCTTAATATTGACCATGGAGGATCTCTCGAAGGCACTTCGTGAG
TATGGAGTGAATGTGAAACATCAAGAATATTTTGCTGATAGCCCTTCAACTGGAGTGGATCCTACTTCCAGAGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCATAGCCAACAAGCGACAGAGAGCAGGCACGACGATGACGCAGCGCTCTCCGAGTTTCTAGCATCTCTAATGGAGTATACTCCCACTATTCCAGACGAGTTGGT
GGAGCATTACTTAGGGAAGAGTGGATTTCAGTGTCCTGACGTTCGATTGATCAGACTTGTAGCTGTTGCCACGCAGAAGTTTGTTGCAGATGTTGCTAGTGATGCTCTCC
AGCATTGTAAGGCAAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGCTTAATATTGACCATGGAGGATCTCTCGAAGGCACTTCGTGAG
TATGGAGTGAATGTGAAACATCAAGAATATTTTGCTGATAGCCCTTCAACTGGAGTGGATCCTACTTCCAGAGAGGAATGA
Protein sequenceShow/hide protein sequence
MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALRE
YGVNVKHQEYFADSPSTGVDPTSREE