; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg033889 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033889
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranscription factor CAULIFLOWER
Genome locationscaffold13:35318237..35321511
RNA-Seq ExpressionSpg033889
SyntenySpg033889
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002487 - Transcription factor, K-box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144163.1 truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sativus]6.0e-3576.52Show/hide
Query:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKE--------------R
        SMEKILERYERYS+VGRQQ AASESEFS ENWTLEYYRLK+KVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVR+RK               R
Subjt:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKE--------------R

Query:  AIQEQNALLAKQARE
         I+E N  LAKQ +E
Subjt:  AIQEQNALLAKQARE

XP_022132007.1 truncated transcription factor CAULIFLOWER A-like [Momordica charantia]2.4e-3981.74Show/hide
Query:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER
        SMEKILERYERYSYVGRQQ+A SE+EFSQENWTLEYYRLK+KVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKH+RS              RKER
Subjt:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER

Query:  AIQEQNALLAKQARE
        AIQEQNALLAKQ +E
Subjt:  AIQEQNALLAKQARE

XP_022951531.1 truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata]1.1e-3982.61Show/hide
Query:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER
        SMEKILERYERYSYVGRQQ+AA+ESEFSQENWTLEYYRLK++VELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS              RKER
Subjt:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER

Query:  AIQEQNALLAKQARE
        AIQEQNALLAKQ +E
Subjt:  AIQEQNALLAKQARE

XP_023002154.1 truncated transcription factor CAULIFLOWER A-like [Cucurbita maxima]1.1e-3982.61Show/hide
Query:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER
        SMEKILERYERYSYVGRQQ+AA+ESEFSQENWTLEYYRLK++VELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS              RKER
Subjt:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER

Query:  AIQEQNALLAKQARE
        AIQEQNALLAKQ +E
Subjt:  AIQEQNALLAKQARE

XP_038886329.1 truncated transcription factor CAULIFLOWER A-like [Benincasa hispida]8.1e-4083.48Show/hide
Query:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER
        SMEKILERYERYSYVGRQQ+AASESEFS ENWTLEYYRLK+KVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS              RKER
Subjt:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER

Query:  AIQEQNALLAKQARE
        AIQEQNALLAKQ +E
Subjt:  AIQEQNALLAKQARE

TrEMBL top hitse value%identityAlignment
A0A0A0KGY7 K-box domain-containing protein1.1e-3476.32Show/hide
Query:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKE--------------RA
        MEKILERYERYS+VGRQQ AASESEFS ENWTLEYYRLK+KVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVR+RK               R 
Subjt:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKE--------------RA

Query:  IQEQNALLAKQARE
        I+E N  LAKQ +E
Subjt:  IQEQNALLAKQARE

A0A1S3BCQ3 truncated transcription factor CAULIFLOWER A5.0e-3575.65Show/hide
Query:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKE--------------R
        SMEKILERYERYS+VGRQQ AASES FS ENWTLEYYRLK+KVELLQRNNSHY+GEDLDSLSVKELQNLEQQIDTALKHVRSRK               R
Subjt:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKE--------------R

Query:  AIQEQNALLAKQARE
         I+E NA LAK+ +E
Subjt:  AIQEQNALLAKQARE

A0A6J1BSN0 truncated transcription factor CAULIFLOWER A-like1.1e-3981.74Show/hide
Query:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER
        SMEKILERYERYSYVGRQQ+A SE+EFSQENWTLEYYRLK+KVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKH+RS              RKER
Subjt:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER

Query:  AIQEQNALLAKQARE
        AIQEQNALLAKQ +E
Subjt:  AIQEQNALLAKQARE

A0A6J1GHU4 truncated transcription factor CAULIFLOWER A-like5.1e-4082.61Show/hide
Query:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER
        SMEKILERYERYSYVGRQQ+AA+ESEFSQENWTLEYYRLK++VELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS              RKER
Subjt:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER

Query:  AIQEQNALLAKQARE
        AIQEQNALLAKQ +E
Subjt:  AIQEQNALLAKQARE

A0A6J1KPM9 truncated transcription factor CAULIFLOWER A-like5.1e-4082.61Show/hide
Query:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER
        SMEKILERYERYSYVGRQQ+AA+ESEFSQENWTLEYYRLK++VELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS              RKER
Subjt:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKER

Query:  AIQEQNALLAKQARE
        AIQEQNALLAKQ +E
Subjt:  AIQEQNALLAKQARE

SwissProt top hitse value%identityAlignment
B4YPW6 Floral homeotic protein APETALA 1 A2.8e-2761.4Show/hide
Query:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERA
        MEKILERYERYSY  R QL A ES+ S  NW++EY RLK K+ELL+RN  HY+GEDL ++S KELQNLEQQ+DTALKH+RS              RKE+A
Subjt:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERA

Query:  IQEQNALLAKQARE
        IQEQN++L+KQ +E
Subjt:  IQEQNALLAKQARE

Q6E6S7 Agamous-like MADS-box protein AP12.8e-2761.4Show/hide
Query:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERA
        MEKIL+RYERYSY  R QL A++ E SQ NW+LEY +LK K+ELLQR+  H++GEDLDSLS+KELQNLEQQ+DTALKH+RS              RKE+A
Subjt:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERA

Query:  IQEQNALLAKQARE
        +QEQN +LAK+ +E
Subjt:  IQEQNALLAKQARE

Q8GTF5 Floral homeotic protein APETALA 1 A2.8e-2761.4Show/hide
Query:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERA
        MEKILERYERYSY  R QL A ES+ S  NW++EY RLK K+ELL+RN  HY+GEDL ++S KELQNLEQQ+DTALKH+RS              RKE+A
Subjt:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERA

Query:  IQEQNALLAKQARE
        IQEQN++L+KQ +E
Subjt:  IQEQNALLAKQARE

Q96355 Floral homeotic protein APETALA 1-18.2e-2760.53Show/hide
Query:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERA
        MEKILERYERYSY  R QL A ES+ +  NW++EY RLK K+ELL+RN  HY+GEDL ++S KELQNLEQQ+DTALKH+RS              RKE+A
Subjt:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERA

Query:  IQEQNALLAKQARE
        IQEQN++L+KQ +E
Subjt:  IQEQNALLAKQARE

Q96356 Floral homeotic protein APETALA 1-22.8e-2761.4Show/hide
Query:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERA
        MEKILERYERYSY  R QL A ES+ S  NW++EY RLK K+ELL+RN  HY+GEDL ++S KELQNLEQQ+DTALKH+RS              RKE+A
Subjt:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERA

Query:  IQEQNALLAKQARE
        IQEQN++L+KQ +E
Subjt:  IQEQNALLAKQARE

Arabidopsis top hitse value%identityAlignment
AT1G26310.1 K-box region and MADS-box transcription factor family protein6.4e-2753.51Show/hide
Query:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERA
        MEK+LERYERYSY  RQ +A      +Q NW++EY RLK K+ELL+RN  HY+GE+L+ +S+K+LQNLEQQ++TALKH+RS              RKE+ 
Subjt:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERA

Query:  IQEQNALLAKQARE
        IQE+N++L KQ +E
Subjt:  IQEQNALLAKQARE

AT1G69120.1 K-box region and MADS-box transcription factor family protein1.3e-2759.65Show/hide
Query:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSR--------------KERA
        MEKILERYERYSY  R QL A ES+ +  NW++EY RLK K+ELL+RN  HY+GEDL ++S KELQNLEQQ+DTALKH+R+R              KE+A
Subjt:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSR--------------KERA

Query:  IQEQNALLAKQARE
        IQEQN++L+KQ +E
Subjt:  IQEQNALLAKQARE

AT3G30260.1 AGAMOUS-like 791.2e-1241.75Show/hide
Query:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKERAIQEQNALLAKQAR
        SME+IL+RYER +Y G  Q   + +  SQ   + E  +L   +++LQR+  H  GE++D LS+++LQ +E Q+DTALK  RSRK + + E  A L K+ +
Subjt:  SMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKERAIQEQNALLAKQAR

Query:  EFR
        E +
Subjt:  EFR

AT5G60910.1 AGAMOUS-like 81.7e-1943.31Show/hide
Query:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKERAIQEQNALLAKQ---
        ME+ILERY+RY Y  +Q +    S+   ENW LE+ +LK +VE+L++N  ++MGEDLDSLS+KELQ+LE Q+D A+K +RSRK +A+ E  + L K+   
Subjt:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKERAIQEQNALLAKQ---

Query:  AREFRWSPMNPAARRETERGRRKKMMV
         ++   S +     RE + G+++  +V
Subjt:  AREFRWSPMNPAARRETERGRRKKMMV

AT5G60910.2 AGAMOUS-like 81.7e-1943.31Show/hide
Query:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKERAIQEQNALLAKQ---
        ME+ILERY+RY Y  +Q +    S+   ENW LE+ +LK +VE+L++N  ++MGEDLDSLS+KELQ+LE Q+D A+K +RSRK +A+ E  + L K+   
Subjt:  MEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKERAIQEQNALLAKQ---

Query:  AREFRWSPMNPAARRETERGRRKKMMV
         ++   S +     RE + G+++  +V
Subjt:  AREFRWSPMNPAARRETERGRRKKMMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTATATTAATGCTTTATTTTGCAGCATGGAGAAAATTCTTGAACGATACGAGAGATATTCTTACGTGGGCAGGCAACAACTTGCAGCTTCTGAATCCGAATTTTC
TCAGGAAAATTGGACTCTCGAATATTATAGACTCAAAACCAAAGTCGAACTTTTACAAAGAAACAACAGTCATTATATGGGAGAAGATTTGGATTCATTGAGTGTCAAAG
AACTGCAAAACTTGGAACAACAGATTGACACTGCACTTAAACATGTTCGTTCGAGAAAAGAAAGAGCAATACAAGAGCAAAACGCCCTACTCGCTAAGCAGGCTCGCGAG
TTTCGATGGTCACCAATGAATCCCGCAGCACGTCGGGAGACCGAGCGGGGAAGGAGGAAGAAGATGATGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACTATATTAATGCTTTATTTTGCAGCATGGAGAAAATTCTTGAACGATACGAGAGATATTCTTACGTGGGCAGGCAACAACTTGCAGCTTCTGAATCCGAATTTTC
TCAGGAAAATTGGACTCTCGAATATTATAGACTCAAAACCAAAGTCGAACTTTTACAAAGAAACAACAGTCATTATATGGGAGAAGATTTGGATTCATTGAGTGTCAAAG
AACTGCAAAACTTGGAACAACAGATTGACACTGCACTTAAACATGTTCGTTCGAGAAAAGAAAGAGCAATACAAGAGCAAAACGCCCTACTCGCTAAGCAGGCTCGCGAG
TTTCGATGGTCACCAATGAATCCCGCAGCACGTCGGGAGACCGAGCGGGGAAGGAGGAAGAAGATGATGGTGTAG
Protein sequenceShow/hide protein sequence
MYYINALFCSMEKILERYERYSYVGRQQLAASESEFSQENWTLEYYRLKTKVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKERAIQEQNALLAKQARE
FRWSPMNPAARRETERGRRKKMMV