; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg033908 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033908
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionmethyl-CpG-binding domain-containing protein 13 isoform X1
Genome locationscaffold13:36786784..36792697
RNA-Seq ExpressionSpg033908
SyntenySpg033908
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574171.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]5.4e-3866.9Show/hide
Query:  FYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVG
        FYIDPVNGN   SIR+VH YLT+G VSRLAYK R QR  D+EF HDDIS     S AVPKK EMQAIGKARRQIIW+++ LEP +ITNDEAIFPNATSVG
Subjt:  FYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVG

Query:  ESMSPPVPNFDHEPKD--------PEQSDGKNDFSQLVVTPS
        ESM    P+  H            PEQSDGKNDFS+LV TPS
Subjt:  ESMSPPVPNFDHEPKD--------PEQSDGKNDFSQLVVTPS

KAG7013226.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-3866.9Show/hide
Query:  FYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVG
        FYIDPVNGN   SIR+VH YLT+G VSRLAYK R QR  D+EF HDDIS     S AVPKK EMQAIGKARRQIIW+E+ LEP +ITN+EAIFPNATSVG
Subjt:  FYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVG

Query:  ESMSPPVPNFDHEPKD--------PEQSDGKNDFSQLVVTPS
        ESM    P+  H            PEQSDGKNDFS+LV TPS
Subjt:  ESMSPPVPNFDHEPKD--------PEQSDGKNDFSQLVVTPS

XP_022140860.1 methyl-CpG-binding domain-containing protein 13 isoform X2 [Momordica charantia]2.7e-3752.06Show/hide
Query:  QVSQEPIVSLSLGLALWHCAEQLKEGHDTTVADGNGSSGSTHKLFYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSL
        ++ ++P+ ++ +  A+   AE+L  G    +     ++      FYIDPV GNAL SIRDVH YLTTGKVSRLAYK R QRN+++EF +DDISVSALKS 
Subjt:  QVSQEPIVSLSLGLALWHCAEQLKEGHDTTVADGNGSSGSTHKLFYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSL

Query:  AVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVGESM--SPPVPNFDH---------------EPKDPEQSDGKNDFSQLVVTP
        AV KK EM  IGKARRQI+WS++S EPSEI NDEA F N+  V ESM  S P     H               E KDPEQS  KNDFS++V TP
Subjt:  AVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVGESM--SPPVPNFDH---------------EPKDPEQSDGKNDFSQLVVTP

XP_023541411.1 methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucurbita pepo subsp. pepo]9.2e-3865.75Show/hide
Query:  FYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVG
        FYIDPVNGN   SIR+VH YLT+G VSRLAYK R QR  D+EF HDDIS     S AVPKK EMQAIGKARRQIIW+E+ LEP EITNDEAIFPNATSVG
Subjt:  FYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVG

Query:  ESMSPPVPNFDHEPKD------------PEQSDGKNDFSQLVVTPS
        ESM    P+  H                PEQSDGKNDF +LV TPS
Subjt:  ESMSPPVPNFDHEPKD------------PEQSDGKNDFSQLVVTPS

XP_023541412.1 methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucurbita pepo subsp. pepo]4.1e-3867.61Show/hide
Query:  FYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVG
        FYIDPVNGN   SIR+VH YLT+G VSRLAYK R QR  D+EF HDDIS     S AVPKK EMQAIGKARRQIIW+E+ LEP EITNDEAIFPNATSVG
Subjt:  FYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVG

Query:  ESMSPPVPNFDHEPKD--------PEQSDGKNDFSQLVVTPS
        ESM    P+  H            PEQSDGKNDF +LV TPS
Subjt:  ESMSPPVPNFDHEPKD--------PEQSDGKNDFSQLVVTPS

TrEMBL top hitse value%identityAlignment
A0A6J1CGC7 methyl-CpG-binding domain-containing protein 13 isoform X21.3e-3752.06Show/hide
Query:  QVSQEPIVSLSLGLALWHCAEQLKEGHDTTVADGNGSSGSTHKLFYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSL
        ++ ++P+ ++ +  A+   AE+L  G    +     ++      FYIDPV GNAL SIRDVH YLTTGKVSRLAYK R QRN+++EF +DDISVSALKS 
Subjt:  QVSQEPIVSLSLGLALWHCAEQLKEGHDTTVADGNGSSGSTHKLFYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSL

Query:  AVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVGESM--SPPVPNFDH---------------EPKDPEQSDGKNDFSQLVVTP
        AV KK EM  IGKARRQI+WS++S EPSEI NDEA F N+  V ESM  S P     H               E KDPEQS  KNDFS++V TP
Subjt:  AVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVGESM--SPPVPNFDH---------------EPKDPEQSDGKNDFSQLVVTP

A0A6J1CGY7 methyl-CpG-binding domain-containing protein 13 isoform X13.8e-3751.01Show/hide
Query:  QVSQEPIVSLSLGLALWHCAEQLKEGHDTTVADGNGSSGSTHKLFYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSL
        ++ ++P+ ++ +  A+   AE+L  G    +     ++      FYIDPV GNAL SIRDVH YLTTGKVSRLAYK R QRN+++EF +DDISVSALKS 
Subjt:  QVSQEPIVSLSLGLALWHCAEQLKEGHDTTVADGNGSSGSTHKLFYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSL

Query:  AVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVGESM--SPPVPNFDH-------------------EPKDPEQSDGKNDFSQLVVTP
        AV KK EM  IGKARRQI+WS++S EPSEI NDEA F N+  V ESM  S P     H                   E KDPEQS  KNDFS++V TP
Subjt:  AVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVGESM--SPPVPNFDH-------------------EPKDPEQSDGKNDFSQLVVTP

A0A6J1CI95 methyl-CpG-binding domain-containing protein 13 isoform X43.8e-3751.01Show/hide
Query:  QVSQEPIVSLSLGLALWHCAEQLKEGHDTTVADGNGSSGSTHKLFYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSL
        ++ ++P+ ++ +  A+   AE+L  G    +     ++      FYIDPV GNAL SIRDVH YLTTGKVSRLAYK R QRN+++EF +DDISVSALKS 
Subjt:  QVSQEPIVSLSLGLALWHCAEQLKEGHDTTVADGNGSSGSTHKLFYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSL

Query:  AVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVGESM--SPPVPNFDH-------------------EPKDPEQSDGKNDFSQLVVTP
        AV KK EM  IGKARRQI+WS++S EPSEI NDEA F N+  V ESM  S P     H                   E KDPEQS  KNDFS++V TP
Subjt:  AVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVGESM--SPPVPNFDH-------------------EPKDPEQSDGKNDFSQLVVTP

A0A6J1FZ39 methyl-CpG-binding domain-containing protein 13 isoform X13.8e-3762.33Show/hide
Query:  FYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVG
        FYIDPVNGN   SIR+VH Y+T+G VSRLAYK R QR  ++EF HDDIS  A+       K+EMQAIGKARRQIIW+E+ LEP EITNDEAIFPNATSVG
Subjt:  FYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVG

Query:  ESMSPPVPNFDHEPKD------------PEQSDGKNDFSQLVVTPS
        ESM    P+  H                PEQSDGKNDFS+LV TPS
Subjt:  ESMSPPVPNFDHEPKD------------PEQSDGKNDFSQLVVTPS

A0A6J1FZ67 methyl-CpG-binding domain-containing protein 13 isoform X21.7e-3764.08Show/hide
Query:  FYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVG
        FYIDPVNGN   SIR+VH Y+T+G VSRLAYK R QR  ++EF HDDIS  A+       K+EMQAIGKARRQIIW+E+ LEP EITNDEAIFPNATSVG
Subjt:  FYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSVG

Query:  ESMSPPVPNFDHEPKD--------PEQSDGKNDFSQLVVTPS
        ESM    P+  H            PEQSDGKNDFS+LV TPS
Subjt:  ESMSPPVPNFDHEPKD--------PEQSDGKNDFSQLVVTPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCACAAGGTTCTTCACTGTGGGGCTACCATTCTGCTTCGGGATGATCAGTTGACATTGGCTTTGAGAAGAGTCGAAGAGTCGAAGAGTCGAGATTGGCTGATCAA
CGCCATTATTGGCGTTGAGGAGAAGGGCATTGGTGAACATGAGCATCGAAGAAGTCCTAAGAGGAAGCCAATTGAATCACTAGAGCTCTCTATGGCGATGATTACTGCAT
TCTGCAAGTTTCAGGTGAGCCAAGAACCCATTGTCTCTCTTTCCCTTGGACTTGCCCTGTGGCATTGTGCTGAACAACTTAAAGAAGGTCATGATACCACTGTGGCTGAT
GGCAATGGTTCCAGTGGCTCTACTCACAAACTTTTTTACATTGATCCTGTCAATGGAAATGCACTTCACTCTATAAGGGATGTACATTGGTATCTAACAACTGGAAAGGT
GAGCCGGTTAGCATATAAATTAAGGAAGCAGAGAAACAACGATATTGAGTTTCATCACGATGACATCTCTGTAAGTGCTCTGAAGTCGCTTGCTGTGCCCAAGAAAGAAG
AGATGCAAGCGATTGGTAAAGCAAGGAGACAGATTATATGGAGTGAGAGTTCATTGGAACCCAGTGAAATAACAAATGATGAAGCTATTTTTCCAAATGCTACAAGTGTT
GGAGAAAGCATGTCTCCTCCAGTACCTAATTTCGATCATGAGCCCAAAGATCCAGAGCAATCAGATGGAAAGAATGATTTTTCTCAACTTGTGGTGACTCCCAGCTTGAT
AGATAAATCAGTTTATGGGGAACACTCAGCTCTAAGTGTTCGAAACTTTGGCCGAATTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCACAAGGTTCTTCACTGTGGGGCTACCATTCTGCTTCGGGATGATCAGTTGACATTGGCTTTGAGAAGAGTCGAAGAGTCGAAGAGTCGAGATTGGCTGATCAA
CGCCATTATTGGCGTTGAGGAGAAGGGCATTGGTGAACATGAGCATCGAAGAAGTCCTAAGAGGAAGCCAATTGAATCACTAGAGCTCTCTATGGCGATGATTACTGCAT
TCTGCAAGTTTCAGGTGAGCCAAGAACCCATTGTCTCTCTTTCCCTTGGACTTGCCCTGTGGCATTGTGCTGAACAACTTAAAGAAGGTCATGATACCACTGTGGCTGAT
GGCAATGGTTCCAGTGGCTCTACTCACAAACTTTTTTACATTGATCCTGTCAATGGAAATGCACTTCACTCTATAAGGGATGTACATTGGTATCTAACAACTGGAAAGGT
GAGCCGGTTAGCATATAAATTAAGGAAGCAGAGAAACAACGATATTGAGTTTCATCACGATGACATCTCTGTAAGTGCTCTGAAGTCGCTTGCTGTGCCCAAGAAAGAAG
AGATGCAAGCGATTGGTAAAGCAAGGAGACAGATTATATGGAGTGAGAGTTCATTGGAACCCAGTGAAATAACAAATGATGAAGCTATTTTTCCAAATGCTACAAGTGTT
GGAGAAAGCATGTCTCCTCCAGTACCTAATTTCGATCATGAGCCCAAAGATCCAGAGCAATCAGATGGAAAGAATGATTTTTCTCAACTTGTGGTGACTCCCAGCTTGAT
AGATAAATCAGTTTATGGGGAACACTCAGCTCTAAGTGTTCGAAACTTTGGCCGAATTCTCTAA
Protein sequenceShow/hide protein sequence
MTHKVLHCGATILLRDDQLTLALRRVEESKSRDWLINAIIGVEEKGIGEHEHRRSPKRKPIESLELSMAMITAFCKFQVSQEPIVSLSLGLALWHCAEQLKEGHDTTVAD
GNGSSGSTHKLFYIDPVNGNALHSIRDVHWYLTTGKVSRLAYKLRKQRNNDIEFHHDDISVSALKSLAVPKKEEMQAIGKARRQIIWSESSLEPSEITNDEAIFPNATSV
GESMSPPVPNFDHEPKDPEQSDGKNDFSQLVVTPSLIDKSVYGEHSALSVRNFGRIL