; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg033915 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033915
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCHCH domain-containing protein
Genome locationscaffold13:33581462..33583466
RNA-Seq ExpressionSpg033915
SyntenySpg033915
Gene Ontology termsGO:0007005 - mitochondrion organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065106.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10 [Cucumis melo var. makuwa]2.5e-5281.02Show/hide
Query:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQS
        G +A   A   P  +  + V+SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+SSAP+VASN GGS+ACNVQS
Subjt:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQS

Query:  KAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA
        K+FQDCLNHYGSDI KCQFYLDMLQECRR SGSVLGA
Subjt:  KAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA

XP_008444901.1 PREDICTED: uncharacterized protein C6C3.02c-like [Cucumis melo]5.5e-5280.29Show/hide
Query:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQS
        G +A   A   P  +  + V+SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+SSAP+VA+N GGS+ACNVQS
Subjt:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQS

Query:  KAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA
        K+FQDCLNHYGSDI KCQFYLDMLQECRR SGSVLGA
Subjt:  KAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA

XP_011649682.1 hemiasterlin resistant protein 1 [Cucumis sativus]2.1e-5191.45Show/hide
Query:  SSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGKCQFY
        S APPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHETVDSS+SSAP+VASN GGS+ACNVQSK+FQDCLNHYGSDI KCQFY
Subjt:  SSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGKCQFY

Query:  LDMLQECRRGSGSVLGA
        LDMLQECRR SGSVLGA
Subjt:  LDMLQECRRGSGSVLGA

XP_022962551.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita moschata]1.6e-5181.16Show/hide
Query:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSS-SSAPAVASNPGGSEACNVQ
        G +A   A   P  +  +   SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSS+ SSAP+VASNPGGS+ACNVQ
Subjt:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSS-SSAPAVASNPGGSEACNVQ

Query:  SKAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA
        SK+FQDCLNHYGSDI KCQFYLDMLQECR+ SGSVLGA
Subjt:  SKAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA

XP_038886373.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Benincasa hispida]9.4e-5290.6Show/hide
Query:  SSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGKCQFY
        SSAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+SSAP+VA+NPGGS+AC VQSK+FQDCLNHYGSDI KCQFY
Subjt:  SSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGKCQFY

Query:  LDMLQECRRGSGSVLGA
        LDMLQECRR SGSVLGA
Subjt:  LDMLQECRRGSGSVLGA

TrEMBL top hitse value%identityAlignment
A0A0A0LNY2 CHCH domain-containing protein1.0e-5191.45Show/hide
Query:  SSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGKCQFY
        S APPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHETVDSS+SSAP+VASN GGS+ACNVQSK+FQDCLNHYGSDI KCQFY
Subjt:  SSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGKCQFY

Query:  LDMLQECRRGSGSVLGA
        LDMLQECRR SGSVLGA
Subjt:  LDMLQECRRGSGSVLGA

A0A1S3BAZ1 uncharacterized protein C6C3.02c-like2.7e-5280.29Show/hide
Query:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQS
        G +A   A   P  +  + V+SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+SSAP+VA+N GGS+ACNVQS
Subjt:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQS

Query:  KAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA
        K+FQDCLNHYGSDI KCQFYLDMLQECRR SGSVLGA
Subjt:  KAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA

A0A5A7VFK2 Coiled-coil-helix-coiled-coil-helix domain-containing protein 101.2e-5281.02Show/hide
Query:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQS
        G +A   A   P  +  + V+SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+SSAP+VASN GGS+ACNVQS
Subjt:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQS

Query:  KAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA
        K+FQDCLNHYGSDI KCQFYLDMLQECRR SGSVLGA
Subjt:  KAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA

A0A6J1HDK4 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial7.8e-5281.16Show/hide
Query:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSS-SSAPAVASNPGGSEACNVQ
        G +A   A   P  +  +   SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSS+ SSAP+VASNPGGS+ACNVQ
Subjt:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSS-SSAPAVASNPGGSEACNVQ

Query:  SKAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA
        SK+FQDCLNHYGSDI KCQFYLDMLQECR+ SGSVLGA
Subjt:  SKAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA

A0A6J1K966 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like2.3e-5180.43Show/hide
Query:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSS-SSAPAVASNPGGSEACNVQ
        G +A   A   P  +  +  +SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSS+ SSAP+VA NPGGS+ACNVQ
Subjt:  GDAALPKAFFVPKIDLTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSS-SSAPAVASNPGGSEACNVQ

Query:  SKAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA
        SK+FQDCLNHYGSDI KCQFYLDMLQECR+ SGSVLGA
Subjt:  SKAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09570.1 Cox19-like CHCH family protein8.8e-3257.14Show/hide
Query:  AVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGKCQ
        +V+ APPPA  Q   GGS LG IGA+I +G+A+GTG+A  HR VD+VMGPR  +HETV S   SA    +      AC++ SKAFQDC+NH+GSDI KCQ
Subjt:  AVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGKCQ

Query:  FYLDMLQECRRGSGSVLGA
        FY+DML EC++ SGSV+ A
Subjt:  FYLDMLQECRRGSGSVLGA

AT5G64400.1 CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625)2.4e-3767.23Show/hide
Query:  VSSAPPPAPVQ-GGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGKCQ
        V  APPPAP Q  GGGG M  GIG+TIAQGMAFGTGSAVAHRAVD+VMGPR IQHE V+++S+SA A A +   S  C++ +KAFQDC+  YGS+I KCQ
Subjt:  VSSAPPPAPVQ-GGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGKCQ

Query:  FYLDMLQECRRGSGSVLGA
        FY+DML ECR+ SGSV+GA
Subjt:  FYLDMLQECRRGSGSVLGA

AT5G64400.2 BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1)1.4e-2166.67Show/hide
Query:  VSSAPPPAPVQ-GGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQD
        V  APPPAP Q  GGGG M  GIG+TIAQGMAFGTGSAVAHRAVD+VMGPR IQHE V+++S+SA A A +   S  C++ +KAFQD
Subjt:  VSSAPPPAPVQ-GGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGTCGGAGCTCCGGAGGTCAGTATTCCGTCGATTTCTCCTTTATTTCTTCTTATGTCAATCGTCATATCTGCGTTCAGATGATTTTATCTCGCCAGATTTTGTT
TCCGGTTATTTTTTCCTGTCTGGACGATCTGCTTCCCGTCCCGCCCCTCGCGCTCCACTACGCAACCCTCCGGCGCCAGGGGAAAGTTTGTCGGGTAGCCGTTGTTAGGG
CCTGCGTTTTAGGTGATATCTACCCTGTATGTCCGTGGTGGGTTGGGTTCTTGCCCGGGCTCCTTGGAGATGCGGCTTTACCCAAGGCATTTTTTGTCCCTAAAATTGAC
TTGACTTCTGCAGTTAGTTCTGCTCCTCCACCCGCACCTGTACAAGGTGGTGGAGGTGGGTCTATGCTGGGAGGAATTGGTGCCACTATTGCTCAAGGTATGGCCTTTGG
TACCGGAAGTGCGGTGGCTCACAGGGCTGTTGATGCTGTAATGGGTCCTCGAGTCATCCAGCACGAGACTGTTGATTCATCTTCTTCTTCAGCACCTGCTGTAGCGAGTA
ATCCTGGAGGATCTGAGGCTTGTAATGTTCAATCAAAGGCCTTTCAGGATTGCCTGAACCATTATGGAAGTGACATTGGAAAGTGCCAGTTCTACTTGGATATGTTGCAG
GAATGTCGCAGGGGCTCAGGTTCTGTTTTGGGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGTCGGAGCTCCGGAGGTCAGTATTCCGTCGATTTCTCCTTTATTTCTTCTTATGTCAATCGTCATATCTGCGTTCAGATGATTTTATCTCGCCAGATTTTGTT
TCCGGTTATTTTTTCCTGTCTGGACGATCTGCTTCCCGTCCCGCCCCTCGCGCTCCACTACGCAACCCTCCGGCGCCAGGGGAAAGTTTGTCGGGTAGCCGTTGTTAGGG
CCTGCGTTTTAGGTGATATCTACCCTGTATGTCCGTGGTGGGTTGGGTTCTTGCCCGGGCTCCTTGGAGATGCGGCTTTACCCAAGGCATTTTTTGTCCCTAAAATTGAC
TTGACTTCTGCAGTTAGTTCTGCTCCTCCACCCGCACCTGTACAAGGTGGTGGAGGTGGGTCTATGCTGGGAGGAATTGGTGCCACTATTGCTCAAGGTATGGCCTTTGG
TACCGGAAGTGCGGTGGCTCACAGGGCTGTTGATGCTGTAATGGGTCCTCGAGTCATCCAGCACGAGACTGTTGATTCATCTTCTTCTTCAGCACCTGCTGTAGCGAGTA
ATCCTGGAGGATCTGAGGCTTGTAATGTTCAATCAAAGGCCTTTCAGGATTGCCTGAACCATTATGGAAGTGACATTGGAAAGTGCCAGTTCTACTTGGATATGTTGCAG
GAATGTCGCAGGGGCTCAGGTTCTGTTTTGGGTGCTTAA
Protein sequenceShow/hide protein sequence
MPRRSSGGQYSVDFSFISSYVNRHICVQMILSRQILFPVIFSCLDDLLPVPPLALHYATLRRQGKVCRVAVVRACVLGDIYPVCPWWVGFLPGLLGDAALPKAFFVPKID
LTSAVSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGKCQFYLDMLQ
ECRRGSGSVLGA