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Spg033948 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg033948
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationscaffold13:37185673..37187349
RNA-Seq ExpressionSpg033948
SyntenySpg033948
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022949758.1 probable WRKY transcription factor 15 [Cucurbita moschata]7.4e-0467.35Show/hide
Query:  EEWRRGVMGVDKLIRLLSNAHQQHHSLP-SIQSPN--SNSALDFPTDCR
        +E   G+  V+KLIRLLSNA  QHHSLP S QSPN  SNS  DFPTDCR
Subjt:  EEWRRGVMGVDKLIRLLSNAHQQHHSLP-SIQSPN--SNSALDFPTDCR

XP_022977596.1 probable WRKY transcription factor 15 [Cucurbita maxima]4.3e-0467.35Show/hide
Query:  EEWRRGVMGVDKLIRLLSNAHQQHHSLP-SIQSPN--SNSALDFPTDCR
        +E   G+  V+KLIRLLSNA  QHHSLP S QSPN  SNS  DFPTDCR
Subjt:  EEWRRGVMGVDKLIRLLSNAHQQHHSLP-SIQSPN--SNSALDFPTDCR

XP_023545024.1 probable WRKY transcription factor 15 [Cucurbita pepo subsp. pepo]7.4e-0467.35Show/hide
Query:  EEWRRGVMGVDKLIRLLSNAHQQHHSLP-SIQSPN--SNSALDFPTDCR
        +E   G+  V+KLIRLLSNA  QHHSLP S QSPN  SNS  DFPTDCR
Subjt:  EEWRRGVMGVDKLIRLLSNAHQQHHSLP-SIQSPN--SNSALDFPTDCR

TrEMBL top hitse value%identityAlignment
A0A345BTD7 WRKY33.6e-0467.35Show/hide
Query:  EEWRRGVMGVDKLIRLLSNAHQQHHSLP-SIQSPN--SNSALDFPTDCR
        +E   G+  V+KLIRLLSNA  QHHSLP S QSPN  SNS  DFPTDCR
Subjt:  EEWRRGVMGVDKLIRLLSNAHQQHHSLP-SIQSPN--SNSALDFPTDCR

A0A5A7VAU3 MuDRA-like transposase6.1e-0422.84Show/hide
Query:  VTYPCDVNLSQLKVCAANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCVVVDVQG-------------------------
        V  P   +  +   C  + L      S+ RLTL+  + +N   I + +D+DV W++         D  +VVD                            
Subjt:  VTYPCDVNLSQLKVCAANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCVVVDVQG-------------------------

Query:  -VDTDGIDALTDIVSVSEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSKQYTVACIDDSC
         +D +  ++   ++ +  G +F  K  LKK +  LAL  SF+  T++SN   + + C D +C
Subjt:  -VDTDGIDALTDIVSVSEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSKQYTVACIDDSC

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like6.1e-0424.07Show/hide
Query:  VTYPCDVNLSQLKVCAANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCVVVDVQG-------------------------
        V  P   +  +   C  + L      SIC LTL+    +N   I + +D+DV W++         D  +VVD                            
Subjt:  VTYPCDVNLSQLKVCAANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCVVVDVQG-------------------------

Query:  -VDTDGIDALTDIVSVSEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSKQYTVACIDDSC
         +D +  ++   ++ +  G +F  K  LKK +  LAL  SF+  T++SN   + + C D SC
Subjt:  -VDTDGIDALTDIVSVSEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSKQYTVACIDDSC

A0A6J1GD01 probable WRKY transcription factor 153.6e-0467.35Show/hide
Query:  EEWRRGVMGVDKLIRLLSNAHQQHHSLP-SIQSPN--SNSALDFPTDCR
        +E   G+  V+KLIRLLSNA  QHHSLP S QSPN  SNS  DFPTDCR
Subjt:  EEWRRGVMGVDKLIRLLSNAHQQHHSLP-SIQSPN--SNSALDFPTDCR

A0A6J1IKD4 probable WRKY transcription factor 152.1e-0467.35Show/hide
Query:  EEWRRGVMGVDKLIRLLSNAHQQHHSLP-SIQSPN--SNSALDFPTDCR
        +E   G+  V+KLIRLLSNA  QHHSLP S QSPN  SNS  DFPTDCR
Subjt:  EEWRRGVMGVDKLIRLLSNAHQQHHSLP-SIQSPN--SNSALDFPTDCR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTGACTTATAGTTTTAGGGTTAGGGGGAATTTTGAGAAGTTGAAAGTAGCAGTGGAGGAAGAGTGGAGGCGTGGAGTTATGGGCGTCGATAAGCTCATCCGATT
GCTCTCCAATGCCCACCAACAACATCATTCCTTGCCTTCTATTCAATCCCCCAATTCCAATTCCGCCCTCGATTTCCCCACCGACTGCCGCCGTCTCCAAGTTCAAAAAG
TCTACAGTGGGTTCAAGTCCGGCATTGTGACATATCCCTGTGATGTTAACCTCTCTCAACTAAAGGTATGTGCTGCGAACTACCTCAATTTGGCTGACAGTAGTAGTATC
TGCAGGTTGACACTCTTTAGGAATTGGTCAAGCAACCCGATAAATATAGTCCTCTCAGAAGACAGGGATGTCTTTTGGATGGTAAACGGGTTTCAGAATGGCACGTATAG
GGACTGTTGTGTAGTTGTCGACGTGCAGGGGGTAGATACTGATGGGATTGATGCATTGACCGACATAGTATCTGTATCAGAGGGGTGCGTATTTTCATGCAAAGAACATC
TCAAGAAGGTAGTCTCTTCACTGGCTCTGAAAGGGAGTTTCCAATTCAAGACAATTAAATCCAATAGCAAACAGTATACAGTGGCATGCATAGACGACTCATGCAATGGT
ATATGCGCGCATCTACCTATTGCACGGGGCAGTTGTGGATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTGACTTATAGTTTTAGGGTTAGGGGGAATTTTGAGAAGTTGAAAGTAGCAGTGGAGGAAGAGTGGAGGCGTGGAGTTATGGGCGTCGATAAGCTCATCCGATT
GCTCTCCAATGCCCACCAACAACATCATTCCTTGCCTTCTATTCAATCCCCCAATTCCAATTCCGCCCTCGATTTCCCCACCGACTGCCGCCGTCTCCAAGTTCAAAAAG
TCTACAGTGGGTTCAAGTCCGGCATTGTGACATATCCCTGTGATGTTAACCTCTCTCAACTAAAGGTATGTGCTGCGAACTACCTCAATTTGGCTGACAGTAGTAGTATC
TGCAGGTTGACACTCTTTAGGAATTGGTCAAGCAACCCGATAAATATAGTCCTCTCAGAAGACAGGGATGTCTTTTGGATGGTAAACGGGTTTCAGAATGGCACGTATAG
GGACTGTTGTGTAGTTGTCGACGTGCAGGGGGTAGATACTGATGGGATTGATGCATTGACCGACATAGTATCTGTATCAGAGGGGTGCGTATTTTCATGCAAAGAACATC
TCAAGAAGGTAGTCTCTTCACTGGCTCTGAAAGGGAGTTTCCAATTCAAGACAATTAAATCCAATAGCAAACAGTATACAGTGGCATGCATAGACGACTCATGCAATGGT
ATATGCGCGCATCTACCTATTGCACGGGGCAGTTGTGGATTGTGA
Protein sequenceShow/hide protein sequence
MPLTYSFRVRGNFEKLKVAVEEEWRRGVMGVDKLIRLLSNAHQQHHSLPSIQSPNSNSALDFPTDCRRLQVQKVYSGFKSGIVTYPCDVNLSQLKVCAANYLNLADSSSI
CRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCVVVDVQGVDTDGIDALTDIVSVSEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSKQYTVACIDDSCNG
ICAHLPIARGSCGL