CuGenDBv2

Gene ID	Spg033973
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ATP synthase subunit b', chloroplastic
Genome location	scaffold13:36940152..36940472
RNA-Seq Expression	Spg033973
Synteny	Spg033973
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0009536 - plastid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6585476.1 ATP synthase subunit b', chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

3.5e-38

94.34

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Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        MDERDAAIKEKL+SVKDTSEEVKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRKKIDAELQEALA+LE+QK ETIK+LDAQIAALSDEIV
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLPV
        KKVLPV
Subjt:  KKVLPV

XP_022131427.1 ATP synthase subunit b', chloroplastic [Momordica charantia]

2.7e-38

93.4

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Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        MD+RDAAIKEKL+SVKDTS EVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVE+KLAEGRK+IDAELQEALANLE+QKEETIK+LDAQIAALSDEIV
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLPV
        KKVLPV
Subjt:  KKVLPV

XP_022951454.1 ATP synthase subunit b', chloroplastic [Cucurbita moschata]

3.5e-38

94.34

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Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        MDERDAAIKEKL+SVKDTSEEVKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRKKIDAELQEALA+LE+QK ETIK+LDAQIAALSDEIV
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLPV
        KKVLPV
Subjt:  KKVLPV

XP_023538440.1 ATP synthase subunit b', chloroplastic [Cucurbita pepo subsp. pepo]

3.5e-38

94.34

Show/hide

Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        MDERDAAIKEKL+SVKDTSEEVKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRKKIDAELQEALA+LE+QK ETIK+LDAQIAALSDEIV
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLPV
        KKVLPV
Subjt:  KKVLPV

XP_038886736.1 ATP synthase subunit b', chloroplastic [Benincasa hispida]

5.5e-39

95.28

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Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        MDERD+AIKEKL+SVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLE+QK ETIK+LDAQIAALSDEIV
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLPV
        KKVLPV
Subjt:  KKVLPV

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BD20 ATP synthase subunit b', chloroplastic

2.2e-38

94.34

Show/hide

Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        MDERDAAIKEKLSSVKDTSE VKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRK+IDAELQEALANLE+QK ETIK+LDAQIAALSDEIV
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLPV
        KKVLPV
Subjt:  KKVLPV

A0A5A7VF07 ATP synthase subunit b

2.2e-38

94.34

Show/hide

Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        MDERDAAIKEKLSSVKDTSE VKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRK+IDAELQEALANLE+QK ETIK+LDAQIAALSDEIV
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLPV
        KKVLPV
Subjt:  KKVLPV

A0A6J1BQZ6 ATP synthase subunit b', chloroplastic

1.3e-38

93.4

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Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        MD+RDAAIKEKL+SVKDTS EVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVE+KLAEGRK+IDAELQEALANLE+QKEETIK+LDAQIAALSDEIV
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLPV
        KKVLPV
Subjt:  KKVLPV

A0A6J1GIS7 ATP synthase subunit b', chloroplastic

1.7e-38

94.34

Show/hide

Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        MDERDAAIKEKL+SVKDTSEEVKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRKKIDAELQEALA+LE+QK ETIK+LDAQIAALSDEIV
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLPV
        KKVLPV
Subjt:  KKVLPV

A0A6J1KTQ2 ATP synthase subunit b', chloroplastic

1.7e-38

94.34

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Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        MDERDAAIKEKL+SVKDTSEEVKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRKKIDAELQEALA+LE+QK ETIK+LDAQIAALSDEIV
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLPV
        KKVLPV
Subjt:  KKVLPV

SwissProt top hits

e value

%identity

Alignment

A8J785 ATP synthase subunit b', chloroplastic

2.2e-11

38.1

Show/hide

Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        +DERD  I+ KL SVKD + +V +L  +A  ++++AR+++SA +   K   Q+E+++   E + KI AE++ ++A LE +    +K+LDAQ+  +S E++
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLP
        K+VLP
Subjt:  KKVLP

P31853 ATP synthase subunit b', chloroplastic

1.4e-34

81.13

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Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        MD+RDA+IKE+LS VKDTS EVKQL+EQA AVMRAARAEISAAL KMKKETQ EVE KLAEGRKKI+ ELQEAL +LE QKE+TIK+LD+QI+ALSD+IV
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLPV
        KKVLPV
Subjt:  KKVLPV

P48085 ATP synthase B' chain, cyanelle

4.5e-04

32.08

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Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        +DER   I+   +  +    +  +L  Q    +  AR   S      + E Q  V EKL E +KK D+EL  A   LE QK+E +K+L++++  LS +I+
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLPV
        +K+L +
Subjt:  KKVLPV

Q05367 ATP synthase subunit b'

4.5e-04

27.88

Show/hide

Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        +D RD  I+  L   K+  ++  +L  Q    +   R E  A + + + E Q     ++A  ++ + AEL +A A ++ QK+ T++AL+ Q+++LS++++
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVL
         K+L
Subjt:  KKVL

Q8DLP6 ATP synthase subunit b'

2.7e-04

26.92

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Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        +D RD  I+  L   K+  ++  +L +Q    + + R +  A + + + E Q     ++AE ++ + AEL +  A ++ QK+ T++AL+ Q+A+LS++++
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVL
         K++
Subjt:  KKVL

Arabidopsis top hits

e value

%identity

Alignment

AT4G32260.1 ATPase, F0 complex, subunit B/B', bacterial/chloroplast

4.9e-38

84.76

Show/hide

Query:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV
        MD+RDA+IKEKL+SVKDTS EVK+LDEQAAAVMRAARAEI+AAL KMKKETQ EVEEKLAEGRKK++ EL+EALA+LESQKEETIKALD+QIAALS++IV
Subjt:  MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIV

Query:  KKVLP
        KKVLP
Subjt:  KKVLP

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGACGAGAGGGACGCCGCCATTAAGGAGAAGCTCAGCAGCGTCAAAGACACCTCCGAGGAGGTCAAGCAGCTGGATGAACAGGCTGCGGCGGTGATGAGGGCGGCCAG
GGCGGAGATTTCGGCGGCGCTTACGAAGATGAAGAAGGAAACTCAGGCGGAGGTGGAGGAGAAACTTGCGGAGGGGAGGAAGAAGATTGATGCGGAGTTGCAGGAGGCGT
TGGCCAACTTGGAGAGTCAGAAGGAGGAGACCATTAAAGCCCTCGATGCTCAAATTGCGGCTCTTAGTGACGAGATCGTCAAGAAGGTTCTTCCTGTTTAG

mRNA sequence

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Protein sequence

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MDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKEETIKALDAQIAALSDEIVKKVLPV

Spg033973 (gene) of Sponge gourd (cylindrica) v1 genome