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Spg034012 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034012
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein BIG GRAIN 1-like B
Genome locationscaffold13:32494666..32498387
RNA-Seq ExpressionSpg034012
SyntenySpg034012
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR039621 - Protein BIG GRAIN 1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593542.1 Protein BIG GRAIN 1-like A, partial [Cucurbita argyrosperma subsp. sororia]8.1e-4887.6Show/hide
Query:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV
        LP+DRHGRHRRQNPSFSSSLLDAIYRSIDESN V+GEE+VILYRETMRKKQSI  KEDEDDRLNFRRACMIEKWMEKKVSEKVVVR+SSMADFDRKARNV
Subjt:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV

Query:  RDRDH------REHRDRDFKK
        RDRD+      R+HRDRDFKK
Subjt:  RDRDH------REHRDRDFKK

KAG7025884.1 Protein BIG GRAIN 1-like A, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4786.78Show/hide
Query:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV
        LP+DRHGRHRRQNPSFSSSLLDAIYRSIDESN V+GEE+VILYRETMRKKQS+  KEDEDDRLNFRRACMIEKWMEKKVSEKVVVR+SSMADFDRKARNV
Subjt:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV

Query:  RDRDH------REHRDRDFKK
        RDRD+      R+HRDRDFKK
Subjt:  RDRDH------REHRDRDFKK

XP_022964194.1 protein BIG GRAIN 1-like B [Cucurbita moschata]3.7e-4889.83Show/hide
Query:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV
        LP+DRHGRHRRQNPSFSSSLLDAIYRSIDESN V+GEE+VILYRETMRKKQSI  KEDEDDRLNFRRACMIEKWMEKKVSEKVVVR+SSMADFDRKARNV
Subjt:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV

Query:  RDRDH---REHRDRDFKK
        RDRD+   R+HRDRDFKK
Subjt:  RDRDH---REHRDRDFKK

XP_023000579.1 protein BIG GRAIN 1-like B [Cucurbita maxima]2.4e-4786.78Show/hide
Query:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV
        LP+DRHGRHRRQNPSFSSSLLDAIYRSIDESN V+GEE+VILYRETMRKKQSI  KEDEDDRLNFRRACMIEKWMEKKVSEKVVVR+SSM DFDRKARNV
Subjt:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV

Query:  RDRDH------REHRDRDFKK
        RDRD+      R+HRDRDFKK
Subjt:  RDRDH------REHRDRDFKK

XP_023513689.1 protein BIG GRAIN 1-like B [Cucurbita pepo subsp. pepo]4.8e-4861.03Show/hide
Query:  PFVLPVLWPNFSFNSRLFLPKKTPSELQHRFLFITHILSQQRRDAVEVASRRCLDCAHSA-------------EGASLPEDRHGRHRRQNPSFSSSLLDA
        P ++P  + + S NS   L     S L     F + I+      +V + +     C HS              +   LP+DRHGRHRRQNPSFSSSLLDA
Subjt:  PFVLPVLWPNFSFNSRLFLPKKTPSELQHRFLFITHILSQQRRDAVEVASRRCLDCAHSA-------------EGASLPEDRHGRHRRQNPSFSSSLLDA

Query:  IYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNVRDRDHREH---RDRDFKK
        IYRSIDESN V+GEE+VILYRETMRKKQSI  KEDEDDRLNFRRACMIEKWMEKKVSEKVVVR+SSMADFDRKARNVRDRD+R+    RDRDFKK
Subjt:  IYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNVRDRDHREH---RDRDFKK

TrEMBL top hitse value%identityAlignment
A0A6J1CVT3 protein BIG GRAIN 1-like B2.9e-4386.21Show/hide
Query:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMR-KKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARN
        +PEDRHGRHRRQNPSFSSSLLDAIYRSIDE+N VQGEEQV+LYRETMR KKQSIG ++ EDD LNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARN
Subjt:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMR-KKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARN

Query:  VRDRDHREHRDRDFKK
        VRDRD    R+R FKK
Subjt:  VRDRDHREHRDRDFKK

A0A6J1GM94 protein BIG GRAIN 1-like B1.3e-4389.72Show/hide
Query:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV
        L EDRHGRHR+QNPSFSSSLLDAIYRSIDESN  + EEQVILYRETMRKKQSIGF+EDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSM DFDRKARNV
Subjt:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV

Query:  RDRDHRE
        RDRD ++
Subjt:  RDRDHRE

A0A6J1HME7 protein BIG GRAIN 1-like B1.8e-4889.83Show/hide
Query:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV
        LP+DRHGRHRRQNPSFSSSLLDAIYRSIDESN V+GEE+VILYRETMRKKQSI  KEDEDDRLNFRRACMIEKWMEKKVSEKVVVR+SSMADFDRKARNV
Subjt:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV

Query:  RDRDH---REHRDRDFKK
        RDRD+   R+HRDRDFKK
Subjt:  RDRDH---REHRDRDFKK

A0A6J1JV91 protein BIG GRAIN 1-like B1.1e-4288.79Show/hide
Query:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV
        L EDRHGRHR+QNPSFSSSLLDAIYRSIDESN  + EEQVILYRETMRKKQSIGF+EDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSM DF RKARNV
Subjt:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV

Query:  RDRDHRE
        RDRD ++
Subjt:  RDRDHRE

A0A6J1KKD7 protein BIG GRAIN 1-like B1.1e-4786.78Show/hide
Query:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV
        LP+DRHGRHRRQNPSFSSSLLDAIYRSIDESN V+GEE+VILYRETMRKKQSI  KEDEDDRLNFRRACMIEKWMEKKVSEKVVVR+SSM DFDRKARNV
Subjt:  LPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNV

Query:  RDRDH------REHRDRDFKK
        RDRD+      R+HRDRDFKK
Subjt:  RDRDH------REHRDRDFKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42800.1 unknown protein7.7e-0430.53Show/hide
Query:  RRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEK-WMEKKVSEKVVVRRSSMADFDRKARNVRDR
        R++ PSFSSS+LD++YRSIDES+ +Q + +  +         S    + +D     RRA M E+ W+  + S        S +    +A + R +
Subjt:  RRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEK-WMEKKVSEKVVVRRSSMADFDRKARNVRDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTCAAAATCACAAGCAAAATCTGTCCAATACATCATAAAATCAGTACAAGAAGTAAAGGGAGAAAGATTAAACTCGCTAGCCGTGGTTGCTGCACGTTCCCGTCA
CGATCCCCACGATCTAAGCTCCGAAAATCAACTCCCCTTCGTGCTCCCAGTATTATGGCCGAATTTCTCTTTCAATAGTCGTCTTTTTCTCCCAAAAAAAACTCCCTCCG
AACTGCAACATCGTTTTCTATTTATAACCCACATTTTGTCGCAACAGCGTCGCGACGCTGTGGAGGTAGCGTCTCGACGCTGCCTCGATTGCGCCCATTCTGCTGAAGGG
GCCAGCCTGCCGGAAGATCGCCACGGCCGTCATCGGCGCCAGAATCCCTCCTTCTCTTCTTCTCTTCTCGACGCTATTTACCGCTCCATTGATGAGAGCAACGACGTCCA
AGGCGAGGAGCAGGTGATCTTGTACAGAGAGACCATGAGGAAGAAGCAGAGCATTGGCTTCAAGGAGGATGAAGACGATAGGTTGAACTTCCGTCGCGCTTGTATGATTG
AGAAGTGGATGGAGAAGAAGGTTAGTGAGAAGGTCGTTGTTCGAAGGAGTTCTATGGCGGATTTTGATCGGAAGGCCAGGAATGTTCGTGATCGCGATCATCGTGAACAT
CGTGATCGTGATTTTAAGAAAGAGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTCAAAATCACAAGCAAAATCTGTCCAATACATCATAAAATCAGTACAAGAAGTAAAGGGAGAAAGATTAAACTCGCTAGCCGTGGTTGCTGCACGTTCCCGTCA
CGATCCCCACGATCTAAGCTCCGAAAATCAACTCCCCTTCGTGCTCCCAGTATTATGGCCGAATTTCTCTTTCAATAGTCGTCTTTTTCTCCCAAAAAAAACTCCCTCCG
AACTGCAACATCGTTTTCTATTTATAACCCACATTTTGTCGCAACAGCGTCGCGACGCTGTGGAGGTAGCGTCTCGACGCTGCCTCGATTGCGCCCATTCTGCTGAAGGG
GCCAGCCTGCCGGAAGATCGCCACGGCCGTCATCGGCGCCAGAATCCCTCCTTCTCTTCTTCTCTTCTCGACGCTATTTACCGCTCCATTGATGAGAGCAACGACGTCCA
AGGCGAGGAGCAGGTGATCTTGTACAGAGAGACCATGAGGAAGAAGCAGAGCATTGGCTTCAAGGAGGATGAAGACGATAGGTTGAACTTCCGTCGCGCTTGTATGATTG
AGAAGTGGATGGAGAAGAAGGTTAGTGAGAAGGTCGTTGTTCGAAGGAGTTCTATGGCGGATTTTGATCGGAAGGCCAGGAATGTTCGTGATCGCGATCATCGTGAACAT
CGTGATCGTGATTTTAAGAAAGAGCATTAA
Protein sequenceShow/hide protein sequence
MVSKSQAKSVQYIIKSVQEVKGERLNSLAVVAARSRHDPHDLSSENQLPFVLPVLWPNFSFNSRLFLPKKTPSELQHRFLFITHILSQQRRDAVEVASRRCLDCAHSAEG
ASLPEDRHGRHRRQNPSFSSSLLDAIYRSIDESNDVQGEEQVILYRETMRKKQSIGFKEDEDDRLNFRRACMIEKWMEKKVSEKVVVRRSSMADFDRKARNVRDRDHREH
RDRDFKKEH