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Spg034041 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034041
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCHCH domain-containing protein
Genome locationscaffold13:33571554..33573233
RNA-Seq ExpressionSpg034041
SyntenySpg034041
Gene Ontology termsGO:0007005 - mitochondrion organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065106.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10 [Cucumis melo var. makuwa]4.0e-5288.43Show/hide
Query:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK
        P   +SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+SSAP+VASN GGS+ACNVQSK+FQDCLNHYGSDI K
Subjt:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK

Query:  CQFYLDMLQECRRGSGSVLGA
        CQFYLDMLQECRR SGSVLGA
Subjt:  CQFYLDMLQECRRGSGSVLGA

XP_008444901.1 PREDICTED: uncharacterized protein C6C3.02c-like [Cucumis melo]9.0e-5287.6Show/hide
Query:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK
        P   +SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+SSAP+VA+N GGS+ACNVQSK+FQDCLNHYGSDI K
Subjt:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK

Query:  CQFYLDMLQECRRGSGSVLGA
        CQFYLDMLQECRR SGSVLGA
Subjt:  CQFYLDMLQECRRGSGSVLGA

XP_011649682.1 hemiasterlin resistant protein 1 [Cucumis sativus]6.9e-5289.26Show/hide
Query:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK
        P   S APPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHETVDSS+SSAP+VASN GGS+ACNVQSK+FQDCLNHYGSDI K
Subjt:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK

Query:  CQFYLDMLQECRRGSGSVLGA
        CQFYLDMLQECRR SGSVLGA
Subjt:  CQFYLDMLQECRRGSGSVLGA

XP_022962551.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita moschata]1.5e-5189.34Show/hide
Query:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSS-SSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIG
        P    SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSS+ SSAP+VASNPGGS+ACNVQSK+FQDCLNHYGSDI 
Subjt:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSS-SSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIG

Query:  KCQFYLDMLQECRRGSGSVLGA
        KCQFYLDMLQECR+ SGSVLGA
Subjt:  KCQFYLDMLQECRRGSGSVLGA

XP_038886373.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Benincasa hispida]3.1e-5288.43Show/hide
Query:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK
        P   SSAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+SSAP+VA+NPGGS+AC VQSK+FQDCLNHYGSDI K
Subjt:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK

Query:  CQFYLDMLQECRRGSGSVLGA
        CQFYLDMLQECRR SGSVLGA
Subjt:  CQFYLDMLQECRRGSGSVLGA

TrEMBL top hitse value%identityAlignment
A0A0A0LNY2 CHCH domain-containing protein3.3e-5289.26Show/hide
Query:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK
        P   S APPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHETVDSS+SSAP+VASN GGS+ACNVQSK+FQDCLNHYGSDI K
Subjt:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK

Query:  CQFYLDMLQECRRGSGSVLGA
        CQFYLDMLQECRR SGSVLGA
Subjt:  CQFYLDMLQECRRGSGSVLGA

A0A1S3BAZ1 uncharacterized protein C6C3.02c-like4.3e-5287.6Show/hide
Query:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK
        P   +SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+SSAP+VA+N GGS+ACNVQSK+FQDCLNHYGSDI K
Subjt:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK

Query:  CQFYLDMLQECRRGSGSVLGA
        CQFYLDMLQECRR SGSVLGA
Subjt:  CQFYLDMLQECRRGSGSVLGA

A0A5A7VFK2 Coiled-coil-helix-coiled-coil-helix domain-containing protein 101.9e-5288.43Show/hide
Query:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK
        P   +SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+SSAP+VASN GGS+ACNVQSK+FQDCLNHYGSDI K
Subjt:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK

Query:  CQFYLDMLQECRRGSGSVLGA
        CQFYLDMLQECRR SGSVLGA
Subjt:  CQFYLDMLQECRRGSGSVLGA

A0A6J1HDK4 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial7.4e-5289.34Show/hide
Query:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSS-SSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIG
        P    SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSS+ SSAP+VASNPGGS+ACNVQSK+FQDCLNHYGSDI 
Subjt:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSS-SSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIG

Query:  KCQFYLDMLQECRRGSGSVLGA
        KCQFYLDMLQECR+ SGSVLGA
Subjt:  KCQFYLDMLQECRRGSGSVLGA

A0A6J1K966 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like2.2e-5188.52Show/hide
Query:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSS-SSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIG
        P   +SAPPPAPVQGGGGGSMLGG+GATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSS+ SSAP+VA NPGGS+ACNVQSK+FQDCLNHYGSDI 
Subjt:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSS-SSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIG

Query:  KCQFYLDMLQECRRGSGSVLGA
        KCQFYLDMLQECR+ SGSVLGA
Subjt:  KCQFYLDMLQECRRGSGSVLGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09570.1 Cox19-like CHCH family protein2.9e-3256.2Show/hide
Query:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK
        P++ + APPPA  Q   GGS LG IGA+I +G+A+GTG+A  HR VD+VMGPR  +HETV S   SA    +      AC++ SKAFQDC+NH+GSDI K
Subjt:  PKAFSSAPPPAPVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGK

Query:  CQFYLDMLQECRRGSGSVLGA
        CQFY+DML EC++ SGSV+ A
Subjt:  CQFYLDMLQECRRGSGSVLGA

AT5G64400.1 CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625)1.0e-3765.57Show/hide
Query:  PKAFSSAPPPAPVQ-GGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIG
        P+    APPPAP Q  GGGG M  GIG+TIAQGMAFGTGSAVAHRAVD+VMGPR IQHE V+++S+SA A A +   S  C++ +KAFQDC+  YGS+I 
Subjt:  PKAFSSAPPPAPVQ-GGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIG

Query:  KCQFYLDMLQECRRGSGSVLGA
        KCQFY+DML ECR+ SGSV+GA
Subjt:  KCQFYLDMLQECRRGSGSVLGA

AT5G64400.2 BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1)7.9e-2264.44Show/hide
Query:  PKAFSSAPPPAPVQ-GGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQD
        P+    APPPAP Q  GGGG M  GIG+TIAQGMAFGTGSAVAHRAVD+VMGPR IQHE V+++S+SA A A +   S  C++ +KAFQD
Subjt:  PKAFSSAPPPAPVQ-GGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGTCGGAGCTCCGGAGGTCAGTATTCCGTCGATTTCTCCTTTATTTCTTCTTATGTCAATCGTCATATCTGCGTTCAGATGATTTTATCTCGCCAGATTTTGTT
TCCGGTTATTTTTTCCTGTCTGGACGATCTGCTTCCCGTCCCGCCCCTCGCGCTCCACTACGCAACCCTCCGGCGCCAGGGGAAAGTTTGTCGGGTAGCCGTTGTTAGGG
CCTGCGTTTTAGGTGATATCTACCCTGTATGTCCGTGGTGGGTTGGGTTCTTGCCCGGGCTCCTTGGAGATGCGGCTTTACCCAAGGCATTTAGTTCTGCTCCTCCACCC
GCACCTGTACAAGGTGGTGGAGGTGGGTCTATGCTGGGAGGAATTGGTGCCACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCGGTGGCTCACAGGGCTGTTGA
TGCTGTAATGGGTCCTCGAGTCATCCAGCACGAGACTGTTGATTCATCTTCTTCTTCAGCACCTGCTGTAGCGAGTAATCCTGGAGGATCTGAGGCTTGTAATGTTCAAT
CAAAGGCCTTTCAGGATTGCCTGAACCATTATGGAAGTGACATTGGAAAGTGCCAGTTCTACTTGGATATGTTGCAGGAATGTCGCAGGGGCTCAGGTTCTGTTTTGGGT
GCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGTCGGAGCTCCGGAGGTCAGTATTCCGTCGATTTCTCCTTTATTTCTTCTTATGTCAATCGTCATATCTGCGTTCAGATGATTTTATCTCGCCAGATTTTGTT
TCCGGTTATTTTTTCCTGTCTGGACGATCTGCTTCCCGTCCCGCCCCTCGCGCTCCACTACGCAACCCTCCGGCGCCAGGGGAAAGTTTGTCGGGTAGCCGTTGTTAGGG
CCTGCGTTTTAGGTGATATCTACCCTGTATGTCCGTGGTGGGTTGGGTTCTTGCCCGGGCTCCTTGGAGATGCGGCTTTACCCAAGGCATTTAGTTCTGCTCCTCCACCC
GCACCTGTACAAGGTGGTGGAGGTGGGTCTATGCTGGGAGGAATTGGTGCCACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCGGTGGCTCACAGGGCTGTTGA
TGCTGTAATGGGTCCTCGAGTCATCCAGCACGAGACTGTTGATTCATCTTCTTCTTCAGCACCTGCTGTAGCGAGTAATCCTGGAGGATCTGAGGCTTGTAATGTTCAAT
CAAAGGCCTTTCAGGATTGCCTGAACCATTATGGAAGTGACATTGGAAAGTGCCAGTTCTACTTGGATATGTTGCAGGAATGTCGCAGGGGCTCAGGTTCTGTTTTGGGT
GCTTAA
Protein sequenceShow/hide protein sequence
MPRRSSGGQYSVDFSFISSYVNRHICVQMILSRQILFPVIFSCLDDLLPVPPLALHYATLRRQGKVCRVAVVRACVLGDIYPVCPWWVGFLPGLLGDAALPKAFSSAPPP
APVQGGGGGSMLGGIGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSSSAPAVASNPGGSEACNVQSKAFQDCLNHYGSDIGKCQFYLDMLQECRRGSGSVLG
A