; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034055 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034055
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionZinc finger protein
Genome locationscaffold13:36591743..36593524
RNA-Seq ExpressionSpg034055
SyntenySpg034055
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585459.1 Peptidyl-prolyl cis-trans isomerase CYP95, partial [Cucurbita argyrosperma subsp. sororia]1.4e-8394.81Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR
        MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGG G+GGGR GSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCG SKDEAS+AAYDGDL+R
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR

Query:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
        +RGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
Subjt:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS

KAG7020377.1 SPAC17H9.04c [Cucurbita argyrosperma subsp. argyrosperma]6.8e-8393.51Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR
        MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGG G+GGGR GSS+FGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCG SKDEAS+AAYDGDL+R
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR

Query:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
        +RGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECF+CNAPRDSNSKSPYS
Subjt:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS

XP_022951649.1 TATA-binding protein-associated factor 2N-like [Cucurbita moschata]1.2e-8294.16Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR
        MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGG G+GGGR GSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCG SKDEAS+AAYDGDL+R
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR

Query:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
        +RGFNFGGASN PGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
Subjt:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS

XP_023002539.1 uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita maxima]1.4e-8394.81Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADF-GGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR
        MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADF GGG+GGGR GSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCG SKDEAS+AAYDGDL+R
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADF-GGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR

Query:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
        +RGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
Subjt:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS

XP_023538151.1 uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita pepo subsp. pepo]6.8e-8394.16Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR
        MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGG  +GGGR GSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCG SKDEAS+AAYDGDL+R
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR

Query:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
        +RGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
Subjt:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS

TrEMBL top hitse value%identityAlignment
A0A0A0LLW7 Uncharacterized protein7.3e-8394.19Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGG-FGGGRV-GSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLT
        MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGG +GGGRV GSSSFGFTTGPDVRPGDWYC VANCGAHNFASRSICFKCG +KDE S+AAYDGDL 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGG-FGGGRV-GSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLT

Query:  RMRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
        RMRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
Subjt:  RMRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS

A0A1S3BBL4 uncharacterized RNA-binding protein C17H9.04c7.3e-8394.19Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGG-FGGGRV-GSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLT
        MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGG +GGGRV GSSSFGFTTGPDVRPGDWYC VANCGAHNFASRSICFKCG +KDE S+AAYDGDL 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGG-FGGGRV-GSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLT

Query:  RMRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
        RMRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
Subjt:  RMRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS

A0A6J1BUS6 uncharacterized RNA-binding protein C17H9.04c-like2.2e-7989.03Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGG--RVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLT
        MSRPGDWNCRSCNHLNFQRRDSC RCG+PRADFGGG  GG  RVGSSSFGFTTGPDVRPGDWYCA+ NCGAHNFASRSICFKCG  KD+AS+ AYDGD+ 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGG--RVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLT

Query:  RMRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
        RMRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSN  SPYS
Subjt:  RMRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS

A0A6J1GJE4 TATA-binding protein-associated factor 2N-like5.6e-8394.16Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR
        MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGG G+GGGR GSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCG SKDEAS+AAYDGDL+R
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR

Query:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
        +RGFNFGGASN PGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
Subjt:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS

A0A6J1KQR0 uncharacterized RNA-binding protein C17H9.04c-like6.6e-8494.81Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADF-GGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR
        MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADF GGG+GGGR GSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCG SKDEAS+AAYDGDL+R
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADF-GGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTR

Query:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
        +RGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS
Subjt:  MRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS

SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c3.2e-1134.87Show/hide
Query:  RPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTRMRG
        RPGDWNC  C   NFQRR SC RC  P        G   V +++   T  PD   G+ Y    N  +H  A+       G S   ++      DL    G
Subjt:  RPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTRMRG

Query:  FN----------FGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPR
         N          FGG  N P +++GDW C    C  HNFA    C RC A R
Subjt:  FN----------FGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPR

P32770 Asparagine-rich protein3.8e-0466.67Show/hide
Query:  RPGDWNCRSCNHLNFQRRDSCQRCGDP
        RPGDWNC SC   NFQRR +C RC  P
Subjt:  RPGDWNCRSCNHLNFQRRDSCQRCGDP

Q27294 RNA-binding protein cabeza3.5e-0532.43Show/hide
Query:  RPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTRMRG
        R GDW C SCN+ NF  R+ C RC  P+ D  G  GGG  G    G   G   R  D        G   + +R    + G S+         G  +R   
Subjt:  RPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTRMRG

Query:  FNFGGASNRPG
         N GG   R G
Subjt:  FNFGGASNRPG

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 25.0e-0434.48Show/hide
Query:  GDWNC--RSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVR----PGDWYCAVANCGAHNFASRSICFKCGVSK
        GDW C  + C ++NF RR SC RCG  +          + G +  G T     R      DW C    CG  N+A RS C  C   K
Subjt:  GDWNC--RSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVR----PGDWYCAVANCGAHNFASRSICFKCGVSK

Arabidopsis top hitse value%identityAlignment
AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein2.2e-0730.43Show/hide
Query:  RPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYD
        + GDW C++CN LNF +   C RC D                      T   + PG+W C   +C   NF   SIC KC   + +A++   D
Subjt:  RPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYD

AT2G17975.1 zinc finger (Ran-binding) family protein4.2e-1433.94Show/hide
Query:  RPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPD----VRPGDWYCAVANCGAHNFASRSICFKCGVSKDEA--SSAAYDGD
        R GDW C  C + N+  R  C RC  PR                    T P+     R GDW C    C  +N+ASR  C KCG SK+ A  S+ A  G 
Subjt:  RPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPD----VRPGDWYCAVANCGAHNFASRSICFKCGVSKDEA--SSAAYDGD

Query:  --LTRMRGFNFGGAS-NRPG-----------------WKSGDWICARSDCNEHNFASRRECFRCN
           T +  F  G  S ++PG                 W+SGDWIC    C  HN++SR +C +CN
Subjt:  --LTRMRGFNFGGAS-NRPG-----------------WKSGDWICARSDCNEHNFASRRECFRCN

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein4.0e-3345.39Show/hide
Query:  GDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTRMRGFN
        GDW C +C H NF++R+SCQ+CG P+      FGG  V +  +  T   +V  GDWYC   NCG+HN+ASR+ C++CG+ K E +   Y     +M  + 
Subjt:  GDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTRMRGFN

Query:  FGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRD
          GA+  PGWK+GDW+C R  C  HN+ASR ECF+C   RD
Subjt:  FGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRD

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein2.4e-5462.5Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG------GFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASS----
        MSRPGDWNCRSC+HLNFQRRDSCQRCGD R+  GG      G  GGR   S+FGFTTG DVRPGDWYC V NCG HNFASRS CFKCG  KDE  +    
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG------GFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASS----

Query:  ------AAYDGDLTRMRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPY
              A +D D+ R R    GG   R  WKSGDWIC R  CNEHNFASR ECFRCNAPRD ++++ +
Subjt:  ------AAYDGDLTRMRGFNFGGASNRPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPY

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein9.2e-5462.57Show/hide
Query:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPR-----ADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDE--ASSAA-
        M+RPGDWNCR C+HLNFQRRDSCQRC +PR      D   GF GGR  SSSFGF TGPDVRPGDWYC + +CG HNFA+RS CFKCG +KDE   SSAA 
Subjt:  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPR-----ADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDE--ASSAA-

Query:  ----YDGDLTRMRG-FNFGGASN------RPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPY
             D ++   RG F FGG+S+      R  WKSGDWIC RS CNEHNFASR ECFRCNAP++  ++ PY
Subjt:  ----YDGDLTRMRG-FNFGGASN------RPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGCCCGGGGGATTGGAATTGCAGGTCCTGCAACCATCTCAACTTCCAACGGCGGGACTCCTGTCAGCGCTGTGGAGACCCTAGGGCTGACTTCGGCGGCGGCTT
CGGCGGCGGAAGAGTTGGTTCTTCGTCCTTTGGTTTCACCACCGGCCCCGACGTCCGCCCTGGGGATTGGTACTGCGCCGTCGCCAACTGCGGCGCTCATAACTTCGCTA
GCCGCTCTATCTGCTTCAAGTGCGGCGTCTCCAAGGATGAGGCTTCCTCCGCCGCCTACGACGGCGATTTGACCAGAATGAGAGGCTTTAACTTCGGCGGTGCCTCCAAC
CGCCCTGGATGGAAATCTGGTGATTGGATCTGTGCCAGATCGGATTGTAACGAGCATAACTTTGCCAGTAGAAGGGAATGCTTCAGATGCAATGCGCCAAGGGATTCCAA
CAGCAAGTCACCATACTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCGCCCGGGGGATTGGAATTGCAGGTCCTGCAACCATCTCAACTTCCAACGGCGGGACTCCTGTCAGCGCTGTGGAGACCCTAGGGCTGACTTCGGCGGCGGCTT
CGGCGGCGGAAGAGTTGGTTCTTCGTCCTTTGGTTTCACCACCGGCCCCGACGTCCGCCCTGGGGATTGGTACTGCGCCGTCGCCAACTGCGGCGCTCATAACTTCGCTA
GCCGCTCTATCTGCTTCAAGTGCGGCGTCTCCAAGGATGAGGCTTCCTCCGCCGCCTACGACGGCGATTTGACCAGAATGAGAGGCTTTAACTTCGGCGGTGCCTCCAAC
CGCCCTGGATGGAAATCTGGTGATTGGATCTGTGCCAGATCGGATTGTAACGAGCATAACTTTGCCAGTAGAAGGGAATGCTTCAGATGCAATGCGCCAAGGGATTCCAA
CAGCAAGTCACCATACTCGTAG
Protein sequenceShow/hide protein sequence
MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGVSKDEASSAAYDGDLTRMRGFNFGGASN
RPGWKSGDWICARSDCNEHNFASRRECFRCNAPRDSNSKSPYS