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Spg034100 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034100
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionintracellular protein transport protein USO1-like
Genome locationscaffold13:34195404..34196282
RNA-Seq ExpressionSpg034100
SyntenySpg034100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB86655.1 28 kDa ribonucleoprotein [Morus notabilis]1.3e-1542.38Show/hide
Query:  LPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKM-
        + LPQEIDDYIKESI  TLGLPVS  TLELKL ASE        QCL L S+L ++  + + A+   S +     ++   E +++  E   L+ QC K+ 
Subjt:  LPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKM-

Query:  ----------KAVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQ
                  +A+ + G  A  RAKEAE RV+ELE+EV+GL+++L F++ Q
Subjt:  ----------KAVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQ

KAG6585310.1 hypothetical protein SDJN03_18043, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2956.16Show/hide
Query:  LPQEIDDYIKESIDQTLGLPVSTQTLELKLLAS-------EAQCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKMKAV
        +PQE+D YIKESID TLGLPVSTQTL LKL AS       EAQCLSLQSKLNQ I STK A+   + +   G +++     R+ +EN  L +Q K+MK +
Subjt:  LPQEIDDYIKESIDQTLGLPVSTQTLELKLLAS-------EAQCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKMKAV

Query:  ANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQYRMRKSKY
        A+RGK A++ AKEAE R R+L DE   LTEDLNFF++QY+MRK  +
Subjt:  ANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQYRMRKSKY

KAG7020228.1 hypothetical protein SDJN02_16911, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2755.63Show/hide
Query:  IDDYIKESIDQTLGLPVSTQTLELKLLAS-------EAQCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKMKAVANRG
        +D YIKESID TLGLPVSTQTL LKL AS       EAQCLSLQSKLNQ I STK A+   + +   G +++     R+ +EN  L +Q K+MK +A+RG
Subjt:  IDDYIKESIDQTLGLPVSTQTLELKLLAS-------EAQCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKMKAVANRG

Query:  KSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQYRMRKSKY
        K A++ AKEAE R R+L DE   LTEDLNFF++QY+MRK  +
Subjt:  KSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQYRMRKSKY

XP_022131622.1 uncharacterized protein LOC111004753 [Momordica charantia]1.2e-2655.24Show/hide
Query:  LPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKMKAV
        +PQEIDDYIKESI  +LGLPVS  TLELKL+ASEA       QCLSLQSKLN QIL+ +++K   +++     +++  +   + EEN  L  QCKK+KA 
Subjt:  LPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKMKAV

Query:  ANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQYRMRK
        AN+ K AV+RA E  ARVRELE E+  LT+DL FFQ+QY+ RK
Subjt:  ANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQYRMRK

XP_024024374.1 centlein [Morus notabilis]1.3e-1542.38Show/hide
Query:  LPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKM-
        + LPQEIDDYIKESI  TLGLPVS  TLELKL ASE        QCL L S+L ++  + + A+   S +     ++   E +++  E   L+ QC K+ 
Subjt:  LPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKM-

Query:  ----------KAVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQ
                  +A+ + G  A  RAKEAE RV+ELE+EV+GL+++L F++ Q
Subjt:  ----------KAVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQ

TrEMBL top hitse value%identityAlignment
A0A1Q3CT80 Uncharacterized protein3.1e-1540.65Show/hide
Query:  LPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKMK
        + LPQEIDDYIKESID++LGLP+STQTL+LKL A+E        Q   L SKL Q+  +   A+   + ++     +   E +++  E   L+ QC K +
Subjt:  LPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKMK

Query:  -----------AVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQYRMR
                   A+ + G  A  RAKEAEARV++LE+E+  L EDL F++  Y  R
Subjt:  -----------AVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQYRMR

A0A2N9IYL3 Uncharacterized protein2.4e-1541.4Show/hide
Query:  LPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASE-------AQCLSLQSKLNQQ--ILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKK
        + LPQEIDDYIK+SID +LGLPVSTQTLELKL  S+       ++CLSLQ KL ++  ++    A+   S ++    ++   E +++  E   L+ QC K
Subjt:  LPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASE-------AQCLSLQSKLNQQ--ILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKK

Query:  -----------MKAVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQYRMR
                    +A+ + G  A  RAKEAE RV ELE+EV+ L+E+L F++ +  MR
Subjt:  -----------MKAVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQYRMR

A0A2P6PHG7 Uncharacterized protein6.2e-1644.44Show/hide
Query:  PLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQ--QILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKM
        PLPQE+DDYI+ESID TLGLPVSTQTLELKL  SEA       Q   L +KL +  Q L    A+ C   ++     +   E +R+  E   LV QC K+
Subjt:  PLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQ--QILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKM

Query:  -----------KAVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQY
                   +A+ + G  A  RAKEAE RV ELEDE+  L E+L F +++Y
Subjt:  -----------KAVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQY

A0A6J1BRI9 uncharacterized protein LOC1110047536.0e-2755.24Show/hide
Query:  LPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKMKAV
        +PQEIDDYIKESI  +LGLPVS  TLELKL+ASEA       QCLSLQSKLN QIL+ +++K   +++     +++  +   + EEN  L  QCKK+KA 
Subjt:  LPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKMKAV

Query:  ANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQYRMRK
        AN+ K AV+RA E  ARVRELE E+  LT+DL FFQ+QY+ RK
Subjt:  ANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQYRMRK

W9REI7 28 kDa ribonucleoprotein6.2e-1642.38Show/hide
Query:  LPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKM-
        + LPQEIDDYIKESI  TLGLPVS  TLELKL ASE        QCL L S+L ++  + + A+   S +     ++   E +++  E   L+ QC K+ 
Subjt:  LPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEA-------QCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKM-

Query:  ----------KAVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQ
                  +A+ + G  A  RAKEAE RV+ELE+EV+GL+++L F++ Q
Subjt:  ----------KAVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14680.1 unknown protein2.0e-1133.33Show/hide
Query:  LPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASE-------AQCLSLQSKLNQQILSTKTAKVCGSQ--VDCAGPEESHREKRRIGEENWGLVEQCKK
        + L +E+DD+IKE+ID +LGLP+S   L+ KL  +E        Q LSL S+L ++    K   +  S+  ++    ++   E +++G E   LV QCKK
Subjt:  LPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASE-------AQCLSLQSKLNQQILSTKTAKVCGSQ--VDCAGPEESHREKRRIGEENWGLVEQCKK

Query:  -----------MKAVANRGKSAVNRAKEAEARVRELEDEVKGLTEDL
                    +++   G     RA+EAE+RVRELE+EV+ +++++
Subjt:  -----------MKAVANRGKSAVNRAKEAEARVRELEDEVKGLTEDL

AT4G09060.1 unknown protein4.5e-1131.76Show/hide
Query:  LPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEAQCLSLQSKLNQQILSTKTAKVCGSQV------DCAGPEESHREKRRIGEENWGLVEQCKKMK---
        L QE+++YIK++ID +LGLP+S ++L+ KL  +E     L+ +    I   K       +V      +    ++   E +++  E   L+ QCKK++   
Subjt:  LPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEAQCLSLQSKLNQQILSTKTAKVCGSQV------DCAGPEESHREKRRIGEENWGLVEQCKKMK---

Query:  --------AVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQ
                A+   G  +  RA+EAEARVRELEDE+  ++E++  F+ Q
Subjt:  --------AVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQ

AT4G09060.2 unknown protein4.5e-1131.76Show/hide
Query:  LPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEAQCLSLQSKLNQQILSTKTAKVCGSQV------DCAGPEESHREKRRIGEENWGLVEQCKKMK---
        L QE+++YIK++ID +LGLP+S ++L+ KL  +E     L+ +    I   K       +V      +    ++   E +++  E   L+ QCKK++   
Subjt:  LPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEAQCLSLQSKLNQQILSTKTAKVCGSQV------DCAGPEESHREKRRIGEENWGLVEQCKKMK---

Query:  --------AVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQ
                A+   G  +  RA+EAEARVRELEDE+  ++E++  F+ Q
Subjt:  --------AVANRGKSAVNRAKEAEARVRELEDEVKGLTEDLNFFQDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTTCCCCTTCCCCAAGAAATCGACGATTACATCAAAGAATCAATAGACCAGACTCTGGGCCTCCCCGTCTCCACGCAGACTCTGGAATTGAAACTCCTCGCCTC
CGAAGCCCAATGCCTCTCTTTGCAGTCTAAATTAAACCAACAAATTCTCTCTACTAAAACTGCCAAAGTCTGCGGAAGCCAAGTTGATTGCGCAGGGCCTGAAGAAAGTC
ATCGAGAAAAACGAAGAATTGGGGAAGAGAATTGGGGTTTGGTGGAGCAATGCAAGAAAATGAAAGCCGTCGCCAACAGAGGGAAATCCGCCGTCAATCGCGCCAAGGAA
GCGGAAGCTCGCGTGCGTGAGTTGGAAGACGAGGTCAAGGGATTAACAGAGGATTTGAATTTCTTCCAGGATCAATACCGAATGCGAAAGAGCAAGTATCCAAGAGTTCT
ACCAGATCCGAGTAGTTCGAGGTTGCTGTTCTACCGGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTTCCCCTTCCCCAAGAAATCGACGATTACATCAAAGAATCAATAGACCAGACTCTGGGCCTCCCCGTCTCCACGCAGACTCTGGAATTGAAACTCCTCGCCTC
CGAAGCCCAATGCCTCTCTTTGCAGTCTAAATTAAACCAACAAATTCTCTCTACTAAAACTGCCAAAGTCTGCGGAAGCCAAGTTGATTGCGCAGGGCCTGAAGAAAGTC
ATCGAGAAAAACGAAGAATTGGGGAAGAGAATTGGGGTTTGGTGGAGCAATGCAAGAAAATGAAAGCCGTCGCCAACAGAGGGAAATCCGCCGTCAATCGCGCCAAGGAA
GCGGAAGCTCGCGTGCGTGAGTTGGAAGACGAGGTCAAGGGATTAACAGAGGATTTGAATTTCTTCCAGGATCAATACCGAATGCGAAAGAGCAAGTATCCAAGAGTTCT
ACCAGATCCGAGTAGTTCGAGGTTGCTGTTCTACCGGAATTAG
Protein sequenceShow/hide protein sequence
MSLPLPQEIDDYIKESIDQTLGLPVSTQTLELKLLASEAQCLSLQSKLNQQILSTKTAKVCGSQVDCAGPEESHREKRRIGEENWGLVEQCKKMKAVANRGKSAVNRAKE
AEARVRELEDEVKGLTEDLNFFQDQYRMRKSKYPRVLPDPSSSRLLFYRN