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Spg034107 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034107
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncytochrome b5
Genome locationscaffold13:35406354..35408462
RNA-Seq ExpressionSpg034107
SyntenySpg034107
Gene Ontology termsGO:0009707 - chloroplast outer membrane (cellular component)
GO:0010319 - stromule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001199 - Cytochrome b5-like heme/steroid binding domain
IPR018506 - Cytochrome b5, heme-binding site
IPR036400 - Cytochrome b5-like heme/steroid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598642.1 Cytochrome b5 isoform A, partial [Cucurbita argyrosperma subsp. sororia]1.5e-5987.02Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA
        MPS+S LYSI+EVSQHSSNDDCWII+DGKVYD+TSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIG LD SSSA PELETK PDGYAA
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA

Query:  QVQALTKQYWAAPVAILGISVALGWLYLRKK
        +VQ LTKQYW  P+A+LGISV LGWLYL KK
Subjt:  QVQALTKQYWAAPVAILGISVALGWLYLRKK

XP_022961879.1 cytochrome b5 [Cucurbita moschata]7.7e-5986.26Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA
        MPS+S LYSI+EVSQHSSNDDCWII+DGKVYD+TSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIG LD SSSA PELE K PDGYAA
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA

Query:  QVQALTKQYWAAPVAILGISVALGWLYLRKK
        +VQ LTKQYW  P+A+LGISV LGWLYL KK
Subjt:  QVQALTKQYWAAPVAILGISVALGWLYLRKK

XP_022997294.1 cytochrome b5 [Cucurbita maxima]1.4e-5783.21Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA
        MPS+S LYSI+E+S+HSSNDDCWII+DGKVYD+TSYLDEHPGGDDVI+AATGRDATDDFEDAGHSKD RELM+KFYIG LD SSSA P LETK PDGYAA
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA

Query:  QVQALTKQYWAAPVAILGISVALGWLYLRKK
        QVQ LTKQYW  P+A+LGISV LGWLYL KK
Subjt:  QVQALTKQYWAAPVAILGISVALGWLYLRKK

XP_023545611.1 cytochrome b5 [Cucurbita pepo subsp. pepo]1.2e-5987.02Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA
        MPS+S LYSI+EVSQHSSNDDCWII+DGKVYD+TSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIG LD SSSA PELETK PDGYAA
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA

Query:  QVQALTKQYWAAPVAILGISVALGWLYLRKK
        +VQ LTKQYW  P+A+LG+SVALGWLYL KK
Subjt:  QVQALTKQYWAAPVAILGISVALGWLYLRKK

XP_038884358.1 cytochrome b5 [Benincasa hispida]1.2e-5686.26Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA
        MPS+S LYSIQEVSQHSSNDDCWII+DGKVYD+TSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIG+LD SSS S +LET + DGYAA
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA

Query:  QVQALTKQYWAAPVAILGISVALGWLYLRKK
        +VQA TKQYW APVA+LGISV LG LYLRKK
Subjt:  QVQALTKQYWAAPVAILGISVALGWLYLRKK

TrEMBL top hitse value%identityAlignment
A0A0A0KIR1 Cytochrome b5 heme-binding domain-containing protein1.0e-5683.97Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA
        MPS+S LYSIQEVSQHSSNDDCWII+DGKVYD+TSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIG+LD SS  S +LET + DGYA 
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA

Query:  QVQALTKQYWAAPVAILGISVALGWLYLRKK
        +VQ LTKQYW APVA++GISV LGW YLRKK
Subjt:  QVQALTKQYWAAPVAILGISVALGWLYLRKK

A0A1S3BCR4 cytochrome b51.9e-5580.92Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA
        MPS+S LYSIQEVSQHSS+DDCWII+DGKVYD+TSYLDEHPGGDD+IV ATGRDATDDFEDAGHSKDARELMEKFYIG+LD SSS S +LET + D YA 
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA

Query:  QVQALTKQYWAAPVAILGISVALGWLYLRKK
        +VQ LTKQYW APVA++GIS+ LGW+YLRKK
Subjt:  QVQALTKQYWAAPVAILGISVALGWLYLRKK

A0A6J1BQT8 cytochrome b51.1e-5580.92Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA
        MPS+S LYSIQE+S HSSNDDCWI++DGKVYD+TSYLDEHPGGDDVI+AATGRDATDDFEDAGHSKDARELM+KFYIG LD SSSA PEL+T++ D YAA
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA

Query:  QVQALTKQYWAAPVAILGISVALGWLYLRKK
        +VQ L KQYWAAPVA+LGISV +GWL+LR K
Subjt:  QVQALTKQYWAAPVAILGISVALGWLYLRKK

A0A6J1HFA7 cytochrome b53.7e-5986.26Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA
        MPS+S LYSI+EVSQHSSNDDCWII+DGKVYD+TSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIG LD SSSA PELE K PDGYAA
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA

Query:  QVQALTKQYWAAPVAILGISVALGWLYLRKK
        +VQ LTKQYW  P+A+LGISV LGWLYL KK
Subjt:  QVQALTKQYWAAPVAILGISVALGWLYLRKK

A0A6J1KB15 cytochrome b57.0e-5883.21Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA
        MPS+S LYSI+E+S+HSSNDDCWII+DGKVYD+TSYLDEHPGGDDVI+AATGRDATDDFEDAGHSKD RELM+KFYIG LD SSSA P LETK PDGYAA
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA

Query:  QVQALTKQYWAAPVAILGISVALGWLYLRKK
        QVQ LTKQYW  P+A+LGISV LGWLYL KK
Subjt:  QVQALTKQYWAAPVAILGISVALGWLYLRKK

SwissProt top hitse value%identityAlignment
O48845 Cytochrome b5 isoform B2.6e-2543.09Show/hide
Query:  LYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAAQVQALT
        ++++ EVS+H+   DCWI+++GKVY+VT +L++HPGGDDV++++TG+DATDDFED GHS+ ARE+ME++Y+G +D ++   P+     P       Q  T
Subjt:  LYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAAQVQALT

Query:  KQY------WAAPVAILGISVAL
         ++      +  P+AILG++V +
Subjt:  KQY------WAAPVAILGISVAL

P40934 Cytochrome b54.4e-2544.03Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA
        M S   +   +EVSQH+   DCW+I+ GKVYDVT ++D+HPGGD+V++++TG+DAT+DFED GHS  AR++MEK+YIG +D  SS  P   T     Y A
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA

Query:  QVQALTKQ-----------YWAAPVAILGISVAL
         VQ    Q            +  P+ ILG+++ +
Subjt:  QVQALTKQ-----------YWAAPVAILGISVAL

P49100 Cytochrome b53.4e-2543.9Show/hide
Query:  LYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAAQVQALT
        +Y+++EV++H+S DDCW+I+ GKVY+V+ +L++HPGGDDV++++TG+DATDDFED GHS  AR +M+++Y+G +D  +S  P      P       Q  T
Subjt:  LYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAAQVQALT

Query:  KQY------WAAPVAILGISVAL
         ++      +  P+AILG++VA+
Subjt:  KQY------WAAPVAILGISVAL

Q9FDW8 Cytochrome b5 isoform A4.4e-4161.19Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSAS-PELETKRPDGYA
        MP+L+ LYS++E + H+  DDCW+++DGKVYDV+SY+DEHPGGDDV++A  G+DATDDFEDAGHSKDARELMEK++IG LDESS    PEL+  + D   
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSAS-PELETKRPDGYA

Query:  AQVQA---LTKQYWAAPVAILGISVALGWLYLRK
          VQ    LTKQYW  PV+I+ ISVA+  L+ RK
Subjt:  AQVQA---LTKQYWAAPVAILGISVALGWLYLRK

Q9ZWT2 Cytochrome B5 isoform D9.8e-2557.69Show/hide
Query:  LYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESS
        ++++ EVSQHSS  DCWI++DGKVYDVT +LD+HPGGD+VI+ +TG+DATDDFED GHS  A+ +++++Y+G +D ++
Subjt:  LYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESS

Arabidopsis top hitse value%identityAlignment
AT1G26340.1 cytochrome B5 isoform A3.1e-4261.19Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSAS-PELETKRPDGYA
        MP+L+ LYS++E + H+  DDCW+++DGKVYDV+SY+DEHPGGDDV++A  G+DATDDFEDAGHSKDARELMEK++IG LDESS    PEL+  + D   
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSAS-PELETKRPDGYA

Query:  AQVQA---LTKQYWAAPVAILGISVALGWLYLRK
          VQ    LTKQYW  PV+I+ ISVA+  L+ RK
Subjt:  AQVQA---LTKQYWAAPVAILGISVALGWLYLRK

AT2G32720.1 cytochrome B5 isoform B1.8e-2643.09Show/hide
Query:  LYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAAQVQALT
        ++++ EVS+H+   DCWI+++GKVY+VT +L++HPGGDDV++++TG+DATDDFED GHS+ ARE+ME++Y+G +D ++   P+     P       Q  T
Subjt:  LYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAAQVQALT

Query:  KQY------WAAPVAILGISVAL
         ++      +  P+AILG++V +
Subjt:  KQY------WAAPVAILGISVAL

AT2G46650.1 cytochrome B5 isoform C1.5e-2341.27Show/hide
Query:  LSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESS-----SASPELETKRPDGY
        ++ L S  +V++H   +DCWI++ GKVYD+++++DEHPGGD+V++A TG+DA+ DFED  HSKDA+ELM+K+ IG +D+S+        P  E +     
Subjt:  LSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESS-----SASPELETKRPDGY

Query:  AAQVQALTK-QYWAAPVAILGISVAL
          + ++  K   +  P+ ILG++ AL
Subjt:  AAQVQALTK-QYWAAPVAILGISVAL

AT5G48810.1 cytochrome B5 isoform D7.0e-2657.69Show/hide
Query:  LYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESS
        ++++ EVSQHSS  DCWI++DGKVYDVT +LD+HPGGD+VI+ +TG+DATDDFED GHS  A+ +++++Y+G +D ++
Subjt:  LYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESS

AT5G53560.1 cytochrome B5 isoform E2.0e-2542.64Show/hide
Query:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA
        M S   + S +EVS+H+   DCW+I+ GKVYDVT ++D+HPGGD+V++++TG+DAT+DFED GHS  AR++M+K++IG +D  SS+ P   T       A
Subjt:  MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAA

Query:  QVQALTKQY------WAAPVAILGISVAL
          Q  T ++      +  P+ ILG+++ +
Subjt:  QVQALTKQY------WAAPVAILGISVAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAGCCTTTCGACTCTCTATTCCATTCAAGAAGTCTCACAGCACAGTTCCAACGACGACTGTTGGATCATTGTCGATGGCAAGGTATACGATGTGACATCATATTT
GGATGAGCATCCCGGTGGAGATGATGTTATCGTCGCTGCAACTGGCAGAGATGCCACAGATGATTTTGAAGATGCTGGTCATAGCAAAGACGCCAGAGAGCTGATGGAGA
AGTTCTACATCGGCGTGCTTGATGAATCTTCCTCAGCAAGCCCAGAACTCGAAACGAAGCGACCAGACGGTTATGCAGCTCAGGTTCAGGCCTTGACAAAGCAATACTGG
GCGGCTCCTGTTGCAATACTTGGTATTTCTGTAGCACTTGGCTGGTTATACTTGCGCAAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAGCCTTTCGACTCTCTATTCCATTCAAGAAGTCTCACAGCACAGTTCCAACGACGACTGTTGGATCATTGTCGATGGCAAGGTATACGATGTGACATCATATTT
GGATGAGCATCCCGGTGGAGATGATGTTATCGTCGCTGCAACTGGCAGAGATGCCACAGATGATTTTGAAGATGCTGGTCATAGCAAAGACGCCAGAGAGCTGATGGAGA
AGTTCTACATCGGCGTGCTTGATGAATCTTCCTCAGCAAGCCCAGAACTCGAAACGAAGCGACCAGACGGTTATGCAGCTCAGGTTCAGGCCTTGACAAAGCAATACTGG
GCGGCTCCTGTTGCAATACTTGGTATTTCTGTAGCACTTGGCTGGTTATACTTGCGCAAAAAGTGA
Protein sequenceShow/hide protein sequence
MPSLSTLYSIQEVSQHSSNDDCWIIVDGKVYDVTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDESSSASPELETKRPDGYAAQVQALTKQYW
AAPVAILGISVALGWLYLRKK