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Spg034119 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034119
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionABC transporter B family member 26, chloroplastic
Genome locationscaffold13:32768254..32773803
RNA-Seq ExpressionSpg034119
SyntenySpg034119
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR011527 - ABC transporter type 1, transmembrane domain
IPR022803 - Ribosomal protein L5 domain superfamily
IPR036640 - ABC transporter type 1, transmembrane domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135488.1 ABC transporter B family member 26, chloroplastic isoform X1 [Cucumis sativus]1.0e-3788.12Show/hide
Query:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG
        CFG V++ + VKR RETLY ALLLQDISFFD+ETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMIC TLG IML+YG
Subjt:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG

Query:  R
        R
Subjt:  R

XP_008446165.1 PREDICTED: ABC transporter B family member 26, chloroplastic isoform X1 [Cucumis melo]1.0e-3788.12Show/hide
Query:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG
        CFG V++ + VKR RETLY ALLLQDISFFD+ETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMIC TLG IML+YG
Subjt:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG

Query:  R
        R
Subjt:  R

XP_008446166.1 PREDICTED: ABC transporter B family member 26, chloroplastic isoform X2 [Cucumis melo]1.0e-3788.12Show/hide
Query:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG
        CFG V++ + VKR RETLY ALLLQDISFFD+ETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMIC TLG IML+YG
Subjt:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG

Query:  R
        R
Subjt:  R

XP_022945847.1 ABC transporter B family member 26, chloroplastic isoform X1 [Cucurbita moschata]2.7e-3888.12Show/hide
Query:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG
        CFG V++ + VKR RETLY ALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLL+LSKPLGLCTL+ICFTLG IML+YG
Subjt:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG

Query:  R
        R
Subjt:  R

XP_022945848.1 ABC transporter B family member 26, chloroplastic isoform X2 [Cucurbita moschata]2.7e-3888.12Show/hide
Query:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG
        CFG V++ + VKR RETLY ALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLL+LSKPLGLCTL+ICFTLG IML+YG
Subjt:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG

Query:  R
        R
Subjt:  R

TrEMBL top hitse value%identityAlignment
A0A0A0KVH9 Uncharacterized protein5.0e-3888.12Show/hide
Query:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG
        CFG V++ + VKR RETLY ALLLQDISFFD+ETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMIC TLG IML+YG
Subjt:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG

Query:  R
        R
Subjt:  R

A0A1S3BEE3 ABC transporter B family member 26, chloroplastic isoform X25.0e-3888.12Show/hide
Query:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG
        CFG V++ + VKR RETLY ALLLQDISFFD+ETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMIC TLG IML+YG
Subjt:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG

Query:  R
        R
Subjt:  R

A0A5A7SWM5 ABC transporter B family member 265.0e-3888.12Show/hide
Query:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG
        CFG V++ + VKR RETLY ALLLQDISFFD+ETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMIC TLG IML+YG
Subjt:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG

Query:  R
        R
Subjt:  R

A0A6J1G219 ABC transporter B family member 26, chloroplastic isoform X11.3e-3888.12Show/hide
Query:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG
        CFG V++ + VKR RETLY ALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLL+LSKPLGLCTL+ICFTLG IML+YG
Subjt:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG

Query:  R
        R
Subjt:  R

A0A6J1G250 ABC transporter B family member 26, chloroplastic isoform X21.3e-3888.12Show/hide
Query:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG
        CFG V++ + VKR RETLY ALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLL+LSKPLGLCTL+ICFTLG IML+YG
Subjt:  CFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYG

Query:  R
        R
Subjt:  R

SwissProt top hitse value%identityAlignment
A2YDY2 60S ribosomal protein L114.0e-1671.43Show/hide
Query:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG
        S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFS+ GCFG
Subjt:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG

P42794 60S ribosomal protein L11-21.4e-1673.21Show/hide
Query:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG
        S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Subjt:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG

P42795 60S ribosomal protein L11-11.4e-1673.21Show/hide
Query:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG
        S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Subjt:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG

P46287 60S ribosomal protein L113.0e-1671.43Show/hide
Query:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG
        S  RY V  FGIR NEKIACY+T+RG+  MQ+LE GLKVKEYEL  RNFSD GCFG
Subjt:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG

Q8RY46 ABC transporter B family member 26, chloroplastic5.5e-3472.28Show/hide
Query:  GCFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLY
        GCF  +++ + VKR+RETLY  LL QDISFFDS+TVGDLTSRLG+DCQQVSRVIGNDLN+I RN+LQG GALIYLL+LS PLGLCTL+IC  L  +M +Y
Subjt:  GCFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLY

Query:  G
        G
Subjt:  G

Arabidopsis top hitse value%identityAlignment
AT1G70610.1 transporter associated with antigen processing protein 13.9e-3572.28Show/hide
Query:  GCFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLY
        GCF  +++ + VKR+RETLY  LL QDISFFDS+TVGDLTSRLG+DCQQVSRVIGNDLN+I RN+LQG GALIYLL+LS PLGLCTL+IC  L  +M +Y
Subjt:  GCFGLVSHKLHVKRIRETLYFALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLY

Query:  G
        G
Subjt:  G

AT2G42740.1 ribosomal protein large subunit 16A9.7e-1873.21Show/hide
Query:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG
        S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Subjt:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG

AT3G58700.1 Ribosomal L5P family protein9.7e-1873.21Show/hide
Query:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG
        S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Subjt:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG

AT4G18730.1 ribosomal protein L16B9.7e-1873.21Show/hide
Query:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG
        S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Subjt:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG

AT5G45775.1 Ribosomal L5P family protein9.7e-1873.21Show/hide
Query:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG
        S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG
Subjt:  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGGATGGATCCAATACAAGAGACGACTTGTGAATTCTCAATTGTGAATGAGAAACTCTTTTTGGCCACTTTAAGGTCAGGAGGGAGATACCCTGTTCTTCCATT
TGGAATCAGATGTAATGAGAAGATTGCTTGCTATCTCACCCTTAGAGGTGAGATGGTGATGCAAATTTTGGAATGTGGGTTGAAGGTTAAGGAGTACGAGTTGCATCACA
GGAACTTCAGTGACATTGGATGCTTTGGCTTGGTCTCTCATAAACTGCACGTCAAGAGAATAAGAGAAACACTTTATTTTGCACTTCTCCTACAGGATATATCATTTTTT
GACAGTGAAACTGTTGGTGACCTTACAAGTAGGCTTGGAGCTGATTGCCAGCAAGTGTCAAGAGTCATTGGAAATGATCTTAATTTGATATTACGCAACATTCTCCAGGG
GGGTGGTGCTTTGATCTATTTGCTTCTTTTGTCAAAGCCTCTTGGTTTATGCACACTGATGATATGCTTCACTTTAGGAGTTATTATGCTATTGTATGGCCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGGATGGATCCAATACAAGAGACGACTTGTGAATTCTCAATTGTGAATGAGAAACTCTTTTTGGCCACTTTAAGGTCAGGAGGGAGATACCCTGTTCTTCCATT
TGGAATCAGATGTAATGAGAAGATTGCTTGCTATCTCACCCTTAGAGGTGAGATGGTGATGCAAATTTTGGAATGTGGGTTGAAGGTTAAGGAGTACGAGTTGCATCACA
GGAACTTCAGTGACATTGGATGCTTTGGCTTGGTCTCTCATAAACTGCACGTCAAGAGAATAAGAGAAACACTTTATTTTGCACTTCTCCTACAGGATATATCATTTTTT
GACAGTGAAACTGTTGGTGACCTTACAAGTAGGCTTGGAGCTGATTGCCAGCAAGTGTCAAGAGTCATTGGAAATGATCTTAATTTGATATTACGCAACATTCTCCAGGG
GGGTGGTGCTTTGATCTATTTGCTTCTTTTGTCAAAGCCTCTTGGTTTATGCACACTGATGATATGCTTCACTTTAGGAGTTATTATGCTATTGTATGGCCGGTAA
Protein sequenceShow/hide protein sequence
MSGMDPIQETTCEFSIVNEKLFLATLRSGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLVSHKLHVKRIRETLYFALLLQDISFF
DSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYGR