; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034133 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034133
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionclp protease adapter protein ClpF, chloroplastic
Genome locationscaffold13:35589456..35593693
RNA-Seq ExpressionSpg034133
SyntenySpg034133
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009840 - chloroplastic endopeptidase Clp complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR001943 - UVR domain
IPR011722 - Hemimethylated DNA-binding domain
IPR036623 - Hemimethylated DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064751.1 UvrB/uvrC motif-containing protein isoform 1 [Cucumis melo var. makuwa]7.6e-16789.8Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+TALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA
        FFQLDLATRVQYALNIEQYEIAQELR KLTE   VEAEIIKQQESK+GLTSKSEVQDKGLN+IRLRADLQ AIESENYALAAQLRDEISKLETESLAASA
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA

Query:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN
        KVLAYESAEYSFRLGQKVRH+IFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLLAPEEPDT  ERFDHPY+
Subjt:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN

Query:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        SFLFYGVD+AGDFIPIKQLREKYNRPRHE+PFDPQDDEQQGDD
Subjt:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

XP_008445473.1 PREDICTED: uncharacterized protein LOC103488481 [Cucumis melo]5.8e-16790.09Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+TALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA
        FFQLDLATRVQYALNIEQYEIAQELR KLTE   VEAEIIKQQESK+GLTSKSEVQDKGLN+IRLRADLQ AIESENYALAAQLRDEISKLETESLAASA
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA

Query:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN
        KVLAYESAEYSFRLGQKVRH+IFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLLAPEEPDT  ERFDHPY+
Subjt:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN

Query:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        SFLFYGVD+AGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
Subjt:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

XP_022132156.1 clp protease adapter protein ClpF, chloroplastic [Momordica charantia]9.2e-16589.41Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ
        MV+D+SIHAL ALGDPKVYGSTL WRKNFKQ S+ QL S  CF HQ +RSFS TSQP  L+RGNFK KAGWLFKGGGQGLGARIERSENANNDILIFFFQ
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        LDLATRVQYALNIEQYEIAQ+LRTKLTE   VE EIIKQQESK GLTSKSEVQDKGLN+IRLRADLQNAIESENYALAAQLRD+ISKLETESLAASA VL
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFL
        AYE+AEYSFRLGQKVRH+IFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYVPEENLLAPEEPD   ERFDHPYNSFL
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        FYGVD AGDFIPIKQLREKYNRPRHEVP DPQDDEQ+GDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

XP_022997208.1 clp protease adapter protein ClpF, chloroplastic isoform X1 [Cucurbita maxima]6.0e-16487.68Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ
        MV+DLSIH+LT+LGDPKVYGS LSWR+NFKQ S T LTSRQ FWHQ MRSFS  SQP   KRGNFKVKAGWLF+GGGQGL ARIERSENANNDILIFFFQ
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        LDLATRVQYALNIEQYEIAQELRTKLTE   VEAE+IKQQESKRGLTSKSEVQDKGL++IRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVL
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFL
        AYESAEY+FRLGQK +H+IFGYRGV+CGMDPVCCE+SSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYV EENLL PEEPDTVAERFDHPYNSFL
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD
        FYGVDTAGDFIP++QLREKYNRPRHEVP+D Q DDEQ+GDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD

XP_038886599.1 clp protease adapter protein ClpF, chloroplastic [Benincasa hispida]1.6e-16991.55Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHALTALGDPKVYGS LSWR+N   FKQ S TQLTSRQCFW+QCMRSFS TSQP  LKRGNFKVKAGWLFKGGGQ LG RIERSENANNDILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA
        FFQLDLATRVQYALNIEQYEIAQELRTKLTE   VEAEIIKQQESKRGLTSKSEVQDKGLN+IRLRADLQ A+ESENYALAAQLRDEISKLETESLAASA
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA

Query:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN
        KVLAYESAEYSFRLGQKVRH+IFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLL PEEPD   E FDHPYN
Subjt:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN

Query:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        SFLFYGVDTAGDFIPIKQLREKYNRPR+EVPFDPQDDEQ+GDD
Subjt:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

TrEMBL top hitse value%identityAlignment
A0A1S3BCC1 uncharacterized protein LOC1034884812.8e-16790.09Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+TALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA
        FFQLDLATRVQYALNIEQYEIAQELR KLTE   VEAEIIKQQESK+GLTSKSEVQDKGLN+IRLRADLQ AIESENYALAAQLRDEISKLETESLAASA
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA

Query:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN
        KVLAYESAEYSFRLGQKVRH+IFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLLAPEEPDT  ERFDHPY+
Subjt:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN

Query:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        SFLFYGVD+AGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
Subjt:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A5A7VGB7 UvrB/uvrC motif-containing protein isoform 13.7e-16789.8Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+TALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA
        FFQLDLATRVQYALNIEQYEIAQELR KLTE   VEAEIIKQQESK+GLTSKSEVQDKGLN+IRLRADLQ AIESENYALAAQLRDEISKLETESLAASA
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA

Query:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN
        KVLAYESAEYSFRLGQKVRH+IFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLLAPEEPDT  ERFDHPY+
Subjt:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN

Query:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        SFLFYGVD+AGDFIPIKQLREKYNRPRHE+PFDPQDDEQQGDD
Subjt:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A6J1BRG5 clp protease adapter protein ClpF, chloroplastic4.5e-16589.41Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ
        MV+D+SIHAL ALGDPKVYGSTL WRKNFKQ S+ QL S  CF HQ +RSFS TSQP  L+RGNFK KAGWLFKGGGQGLGARIERSENANNDILIFFFQ
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        LDLATRVQYALNIEQYEIAQ+LRTKLTE   VE EIIKQQESK GLTSKSEVQDKGLN+IRLRADLQNAIESENYALAAQLRD+ISKLETESLAASA VL
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFL
        AYE+AEYSFRLGQKVRH+IFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYVPEENLLAPEEPD   ERFDHPYNSFL
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        FYGVD AGDFIPIKQLREKYNRPRHEVP DPQDDEQ+GDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A6J1HFJ3 clp protease adapter protein ClpF, chloroplastic1.1e-16388.89Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQIS-QTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFF
        MV+DLSIHALTALGDPKVYGSTLSWRKNFKQ S  T LTSRQ FWHQ MRSFS  SQP  LKRGNFKVKAGWLF+GGGQGL ARIERSENANNDILIFFF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQIS-QTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKV
        QLDLATRVQYALNIEQYEIAQELRTKLTE   VE E+IKQQESKRGLTSKSEVQDKGL++IRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKV
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKV

Query:  LAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSF
        LAYESAEYSFRLGQK RH+IFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYV EENLL PEEPDT  ERFDHPYNSF
Subjt:  LAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSF

Query:  LFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD
        LFYGVD+AGDFIP+KQLREKYNRPRHEVP+DPQ DDEQ+GDD
Subjt:  LFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD

A0A6J1KD74 clp protease adapter protein ClpF, chloroplastic isoform X12.9e-16487.68Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ
        MV+DLSIH+LT+LGDPKVYGS LSWR+NFKQ S T LTSRQ FWHQ MRSFS  SQP   KRGNFKVKAGWLF+GGGQGL ARIERSENANNDILIFFFQ
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        LDLATRVQYALNIEQYEIAQELRTKLTE   VEAE+IKQQESKRGLTSKSEVQDKGL++IRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVL
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFL
        AYESAEY+FRLGQK +H+IFGYRGV+CGMDPVCCE+SSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYV EENLL PEEPDTVAERFDHPYNSFL
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD
        FYGVDTAGDFIP++QLREKYNRPRHEVP+D Q DDEQ+GDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD

SwissProt top hitse value%identityAlignment
O94952 F-box only protein 211.3e-0730.36Show/hide
Query:  FRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFLFYGVDTAG
        + +G  ++H+ +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y  +ENL    EP  ++    HP +   ++   T  
Subjt:  FRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFLFYGVDTAG

Query:  DFIPIKQLREKY
         +IP  +L  +Y
Subjt:  DFIPIKQLREKY

Q5R5S1 F-box only protein 211.3e-0730.36Show/hide
Query:  FRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFLFYGVDTAG
        + +G  ++H+ +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y  +ENL    EP  ++    HP +   ++   T  
Subjt:  FRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFLFYGVDTAG

Query:  DFIPIKQLREKY
         +IP  +L  +Y
Subjt:  DFIPIKQLREKY

Q67Y99 Clp protease adapter protein ClpF, chloroplastic2.7e-11467.46Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMR-SFSSTSQPYSLKRGN-FKVKAGWLFKGGG-QGLGARIERSENANNDILIF
        MV+  S+  LT  G  KV  S+L  R     +  + L   +C   Q +R S S  S   SLK+ N  +V+A W F+GGG QGL    ERSE+AN DILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMR-SFSSTSQPYSLKRGN-FKVKAGWLFKGGG-QGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA
        FFQLDLATRVQYA+N+EQY+IAQ+LR KLTE   VE E I+ QE KRG ++KSE QDKG+++IRLRADLQNAI+SE+Y LAA+LRDEISKLE ESLA SA
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA

Query:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN
        K LA+E AEY+FRLGQK+RH+ FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLLAPE+PD   ERFDHPY 
Subjt:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN

Query:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE
        SFL+YG DTAGDFIP+KQLREKYNRPRHEVPFD QD++
Subjt:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE

Q8VDH1 F-box only protein 212.2e-0728.24Show/hide
Query:  ESLAASAKVLAYES-AEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVA
        E +    K+ + E   +  + +G  ++H+ +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y  +ENL    EP  ++
Subjt:  ESLAASAKVLAYES-AEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVA

Query:  ERFDHPYNSFLFYGVDTAGDFIPIKQLREKY
            HP +   ++   T   +IP  +L  +Y
Subjt:  ERFDHPYNSFLFYGVDTAGDFIPIKQLREKY

Arabidopsis top hitse value%identityAlignment
AT2G03390.1 uvrB/uvrC motif-containing protein1.9e-11567.46Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMR-SFSSTSQPYSLKRGN-FKVKAGWLFKGGG-QGLGARIERSENANNDILIF
        MV+  S+  LT  G  KV  S+L  R     +  + L   +C   Q +R S S  S   SLK+ N  +V+A W F+GGG QGL    ERSE+AN DILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMR-SFSSTSQPYSLKRGN-FKVKAGWLFKGGG-QGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA
        FFQLDLATRVQYA+N+EQY+IAQ+LR KLTE   VE E I+ QE KRG ++KSE QDKG+++IRLRADLQNAI+SE+Y LAA+LRDEISKLE ESLA SA
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASA

Query:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN
        K LA+E AEY+FRLGQK+RH+ FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLLAPE+PD   ERFDHPY 
Subjt:  KVLAYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYN

Query:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE
        SFL+YG DTAGDFIP+KQLREKYNRPRHEVPFD QD++
Subjt:  SFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE

AT2G03390.2 uvrB/uvrC motif-containing protein1.6e-9376.44Show/hide
Query:  LNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFR
        +N+EQY+IAQ+LR KLTE   VE E I+ QE KRG ++KSE QDKG+++IRLRADLQNAI+SE+Y LAA+LRDEISKLE ESLA SAK LA+E AEY+FR
Subjt:  LNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFR

Query:  LGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFLFYGVDTAGDF
        LGQK+RH+ FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLLAPE+PD   ERFDHPY SFL+YG DTAGDF
Subjt:  LGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFLFYGVDTAGDF

Query:  IPIKQLREKYNRPRHEVPFDPQDDE
        IP+KQLREKYNRPRHEVPFD QD++
Subjt:  IPIKQLREKYNRPRHEVPFDPQDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCGGGATTTGTCAATACACGCTCTGACCGCCTTGGGAGATCCTAAGGTTTATGGATCAACTCTTTCGTGGAGGAAGAATTTCAAGCAGATAAGTCAAACCCAATT
AACTTCCAGGCAATGCTTTTGGCATCAATGCATGCGAAGCTTTTCCTCAACTAGCCAGCCCTATAGTTTGAAACGAGGAAATTTCAAGGTTAAAGCTGGATGGTTGTTTA
AGGGGGGTGGACAAGGGTTGGGTGCTCGTATAGAGCGCAGCGAGAATGCTAACAATGATATCTTAATCTTCTTTTTCCAGCTGGACCTGGCAACAAGAGTACAGTATGCT
TTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAGAACAAAGTTAACTGAGGTCAGGTTTGTTGAAGCAGAAATCATCAAGCAGCAAGAATCAAAAAGAGGGTTAAC
TTCAAAGAGTGAAGTTCAAGACAAAGGTTTAAATATGATTCGTCTACGCGCAGACTTGCAGAATGCTATTGAAAGTGAAAATTATGCTTTGGCAGCACAACTGCGGGATG
AGATTTCCAAACTGGAAACTGAGTCCCTAGCTGCATCTGCAAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTAGATTGGGACAGAAAGTGAGGCACAGAATTTTT
GGATACAGAGGTGTGGTTTGTGGAATGGATCCTGTATGCTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAACTATCTCGAGGTTCTAATCAGCCATTTTA
TCAGGTTTTAGTAGATGTTCGTACAGACCCTGATTTGCTGGTTGCATATGTTCCTGAGGAAAATCTTCTTGCTCCTGAAGAACCAGATACGGTGGCTGAGAGGTTTGATC
ATCCGTATAATTCCTTCTTATTCTATGGAGTGGATACAGCCGGGGATTTCATTCCTATAAAGCAACTGCGGGAGAAGTATAATCGGCCTCGACATGAAGTCCCCTTTGAT
CCTCAAGATGATGAGCAACAGGGTGATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCGGGATTTGTCAATACACGCTCTGACCGCCTTGGGAGATCCTAAGGTTTATGGATCAACTCTTTCGTGGAGGAAGAATTTCAAGCAGATAAGTCAAACCCAATT
AACTTCCAGGCAATGCTTTTGGCATCAATGCATGCGAAGCTTTTCCTCAACTAGCCAGCCCTATAGTTTGAAACGAGGAAATTTCAAGGTTAAAGCTGGATGGTTGTTTA
AGGGGGGTGGACAAGGGTTGGGTGCTCGTATAGAGCGCAGCGAGAATGCTAACAATGATATCTTAATCTTCTTTTTCCAGCTGGACCTGGCAACAAGAGTACAGTATGCT
TTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAGAACAAAGTTAACTGAGGTCAGGTTTGTTGAAGCAGAAATCATCAAGCAGCAAGAATCAAAAAGAGGGTTAAC
TTCAAAGAGTGAAGTTCAAGACAAAGGTTTAAATATGATTCGTCTACGCGCAGACTTGCAGAATGCTATTGAAAGTGAAAATTATGCTTTGGCAGCACAACTGCGGGATG
AGATTTCCAAACTGGAAACTGAGTCCCTAGCTGCATCTGCAAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTAGATTGGGACAGAAAGTGAGGCACAGAATTTTT
GGATACAGAGGTGTGGTTTGTGGAATGGATCCTGTATGCTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAACTATCTCGAGGTTCTAATCAGCCATTTTA
TCAGGTTTTAGTAGATGTTCGTACAGACCCTGATTTGCTGGTTGCATATGTTCCTGAGGAAAATCTTCTTGCTCCTGAAGAACCAGATACGGTGGCTGAGAGGTTTGATC
ATCCGTATAATTCCTTCTTATTCTATGGAGTGGATACAGCCGGGGATTTCATTCCTATAAAGCAACTGCGGGAGAAGTATAATCGGCCTCGACATGAAGTCCCCTTTGAT
CCTCAAGATGATGAGCAACAGGGTGATGATTAA
Protein sequenceShow/hide protein sequence
MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQLDLATRVQYA
LNIEQYEIAQELRTKLTEVRFVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHRIF
GYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTVAERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFD
PQDDEQQGDD