; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034144 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034144
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein Iojap-related, mitochondrial
Genome locationscaffold13:36060595..36063290
RNA-Seq ExpressionSpg034144
SyntenySpg034144
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0090071 - negative regulation of ribosome biogenesis (biological process)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR004394 - Protein Iojap/ribosomal silencing factor RsfS
IPR043519 - Nucleotidyltransferase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029243.1 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.6e-7887.08Show/hide
Query:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRSS A+SSTIR LQLWNRGVSV NHTLSSSTASS  +GLLDLQEVETILNNVKADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK
                VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS +TPQ+DSSQ+LD+ALVK
Subjt:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK

XP_022131306.1 protein Iojap-related, mitochondrial [Momordica charantia]4.5e-7884.83Show/hide
Query:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML AQRIRSS A SSTIRSLQ WN+G+ VHNHT+SSSTASSSN GLLDLQEVET+LNNVKADD+KVIP+RKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK
                +KQKQKGA+QL+LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTET  +DSSQDLD+ALVK
Subjt:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK

XP_022961631.1 protein Iojap-related, mitochondrial [Cucurbita moschata]1.5e-7887.08Show/hide
Query:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRSS A+SSTIR LQLWNRGVSV NHTLSSSTASS  +GLLDLQEVETILNNVKADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK
                VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS +TPQ+DSSQ+LD+ALVK
Subjt:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK

XP_022997359.1 protein Iojap-related, mitochondrial [Cucurbita maxima]4.1e-7987.64Show/hide
Query:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRSS A+SSTIR LQLWNRGVSV NHTLSSSTASS N+GLLDLQEVETILNNVKADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK
                VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDE ARTYYNLESLWST+TPQ+DSSQ+LD+ALVK
Subjt:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK

XP_038884261.1 protein Iojap-related, mitochondrial [Benincasa hispida]1.8e-7988.2Show/hide
Query:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRI+SS A SSTIRSLQLWNRGVSVHNH LSSSTASS+NKGLLDLQEVETILNNVKADD+KVI VRK+CDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK
                VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDENAR+YYNLESLWSTETPQ+DSSQDLD+A VK
Subjt:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK

TrEMBL top hitse value%identityAlignment
A0A1S3BB26 protein Iojap-related, mitochondrial2.4e-7785.96Show/hide
Query:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRSS A SSTIR LQLWNRGVSVH+H LSSST+SS +K LLDLQEVETILN VKADD+KVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK
                VKQKQKGAKQLVLPSVEGQE+GKWIVIDSGKVVVHALDENAR+YYNLESLWSTETP +DS+QDLD+ALVK
Subjt:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK

A0A5A7UYH0 Protein Iojap-related1.2e-7685.39Show/hide
Query:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIR S A SSTIR LQLWNRGVSVH+H LSSST+SS +K LLDLQEVETILN VKADD+KVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK
                VKQKQKGAKQLVLPSVEGQE+GKWIVIDSGKVVVHALDENAR+YYNLESLWSTETP +DS+QDLD+ALVK
Subjt:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK

A0A6J1BP74 protein Iojap-related, mitochondrial2.2e-7884.83Show/hide
Query:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML AQRIRSS A SSTIRSLQ WN+G+ VHNHT+SSSTASSSN GLLDLQEVET+LNNVKADD+KVIP+RKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK
                +KQKQKGA+QL+LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTET  +DSSQDLD+ALVK
Subjt:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK

A0A6J1HAW7 protein Iojap-related, mitochondrial7.5e-7987.08Show/hide
Query:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRSS A+SSTIR LQLWNRGVSV NHTLSSSTASS  +GLLDLQEVETILNNVKADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK
                VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS +TPQ+DSSQ+LD+ALVK
Subjt:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK

A0A6J1KB66 protein Iojap-related, mitochondrial2.0e-7987.64Show/hide
Query:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRSS A+SSTIR LQLWNRGVSV NHTLSSSTASS N+GLLDLQEVETILNNVKADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK
                VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDE ARTYYNLESLWST+TPQ+DSSQ+LD+ALVK
Subjt:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK

SwissProt top hitse value%identityAlignment
P0AAT6 Ribosomal silencing factor RsfS7.1e-1034.29Show/hide
Query:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNL
        ++++K  DI  + V+      D M+  TG S+ HV +IA  ++            Q+ + A  L L  VEG+    WIV+D G V+VH + E +R  Y L
Subjt:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNL

Query:  ESLWS
        E LWS
Subjt:  ESLWS

P0AAT7 Ribosomal silencing factor RsfS7.1e-1034.29Show/hide
Query:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNL
        ++++K  DI  + V+      D M+  TG S+ HV +IA  ++            Q+ + A  L L  VEG+    WIV+D G V+VH + E +R  Y L
Subjt:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNL

Query:  ESLWS
        E LWS
Subjt:  ESLWS

P0AAT8 Ribosomal silencing factor RsfS7.1e-1034.29Show/hide
Query:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNL
        ++++K  DI  + V+      D M+  TG S+ HV +IA  ++            Q+ + A  L L  VEG+    WIV+D G V+VH + E +R  Y L
Subjt:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNL

Query:  ESLWS
        E LWS
Subjt:  ESLWS

Q02SH2 Ribosomal silencing factor RsfS4.9e-1138.46Show/hide
Query:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNL
        L ++KA DI  + VR      DYMV A G S+  VK++A  ++ KA          K+ G K L     EG E G+W ++D G VVVH +    R +Y+L
Subjt:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNL

Query:  ESLW
        E LW
Subjt:  ESLW

Q9CAF9 Protein Iojap-related, mitochondrial6.8e-3751.4Show/hide
Query:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML   R R S  L +  +S +L    +   + + SSS   S+   +L L EVE IL +VKAD++ VIP    C WAD+ V ATGRS WH++NIAQAL+Y+
Subjt:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSS-QDLDKALVK
        A        KQKQKGAK ++LPSV+G  + KWIVID GK VVHALDE AR Y+NLESLWS E+   D+S QDL    VK
Subjt:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSS-QDLDKALVK

Arabidopsis top hitse value%identityAlignment
AT1G67620.1 Lojap-related protein4.8e-3851.4Show/hide
Query:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML   R R S  L +  +S +L    +   + + SSS   S+   +L L EVE IL +VKAD++ VIP    C WAD+ V ATGRS WH++NIAQAL+Y+
Subjt:  MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSS-QDLDKALVK
        A        KQKQKGAK ++LPSV+G  + KWIVID GK VVHALDE AR Y+NLESLWS E+   D+S QDL    VK
Subjt:  ACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSS-QDLDKALVK

AT3G12930.1 Lojap-related protein1.9e-0529.03Show/hide
Query:  EVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENAR
        E+  + ++VKA DIKV+ V+    W  + + AT  S   +  I   +         ++ K+  K A   V P+        W ++D G VV+H      R
Subjt:  EVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENAR

Query:  TYYNLESLWST----ETPQNDSSQ
        T+YNLE  +      E P  D SQ
Subjt:  TYYNLESLWST----ETPQNDSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCGGCGCAAAGAATTCGATCTTCTTTTGCCCTCTCTTCCACGATTCGTTCTCTTCAACTATGGAACAGAGGCGTTTCTGTTCACAATCATACTCTATCTTCCTC
CACCGCTAGCTCCAGCAACAAAGGTTTACTTGATCTTCAGGAGGTCGAGACGATTCTGAATAACGTGAAGGCAGACGATATCAAAGTGATACCAGTTCGCAAAGACTGTG
ATTGGGCTGATTACATGGTGTTTGCCACTGGTAGGTCTACCTGGCATGTTAAGAACATTGCTCAAGCCCTAATTTACAAGGCATGTTTCTTCTTTTGCATTTCTGTCAAG
CAAAAGCAGAAAGGAGCTAAACAGTTAGTACTCCCTAGTGTGGAAGGGCAAGAAGATGGAAAGTGGATTGTCATCGACTCTGGTAAAGTAGTTGTTCATGCCCTTGATGA
GAACGCCAGAACTTATTACAATCTGGAGAGCCTTTGGTCTACCGAGACACCACAAAATGACTCTTCTCAGGATTTGGACAAAGCTTTAGTGAAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCGGCGCAAAGAATTCGATCTTCTTTTGCCCTCTCTTCCACGATTCGTTCTCTTCAACTATGGAACAGAGGCGTTTCTGTTCACAATCATACTCTATCTTCCTC
CACCGCTAGCTCCAGCAACAAAGGTTTACTTGATCTTCAGGAGGTCGAGACGATTCTGAATAACGTGAAGGCAGACGATATCAAAGTGATACCAGTTCGCAAAGACTGTG
ATTGGGCTGATTACATGGTGTTTGCCACTGGTAGGTCTACCTGGCATGTTAAGAACATTGCTCAAGCCCTAATTTACAAGGCATGTTTCTTCTTTTGCATTTCTGTCAAG
CAAAAGCAGAAAGGAGCTAAACAGTTAGTACTCCCTAGTGTGGAAGGGCAAGAAGATGGAAAGTGGATTGTCATCGACTCTGGTAAAGTAGTTGTTCATGCCCTTGATGA
GAACGCCAGAACTTATTACAATCTGGAGAGCCTTTGGTCTACCGAGACACCACAAAATGACTCTTCTCAGGATTTGGACAAAGCTTTAGTGAAG
Protein sequenceShow/hide protein sequence
MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVK
QKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK