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Spg034146 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034146
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold13:35236184..35239997
RNA-Seq ExpressionSpg034146
SyntenySpg034146
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029590.1 hypothetical protein SDJN02_07930, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-0532.16Show/hide
Query:  TSFQFQWVLAHGILSPGAAPPVFVADVSYHVWPHVRSST-CIHSTVAAGDFDFRCDVPTATSRNR--------------------------------KIT
        TSFQF WV AH ILS G A       V   V   +  +   +H      DFDF  D P   +  R                                K+ 
Subjt:  TSFQFQWVLAHGILSPGAAPPVFVADVSYHVWPHVRSST-CIHSTVAAGDFDFRCDVPTATSRNR--------------------------------KIT

Query:  AGKSGPLNEVAAALLLG--HGCYSCYSLTSNLSQVPQPSLR-FLALFIPGPQITSQFDFGAWQRLRIGAIP
          K   +   A A L G   GC+            P PS   F  LF+ G  ITS FDFGAWQRL IG IP
Subjt:  AGKSGPLNEVAAALLLG--HGCYSCYSLTSNLSQVPQPSLR-FLALFIPGPQITSQFDFGAWQRLRIGAIP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACGTCATTCCAATTCCAGTGGGTGCTCGCACATGGGATTCTTTCCCCGGGGGCTGCGCCTCCCGTTTTCGTGGCGGACGTGTCTTATCACGTGTGGCCGCACGT
ACGCTCATCAACGTGCATCCACTCTACTGTTGCGGCGGGAGATTTTGATTTCCGCTGTGATGTCCCCACTGCCACGTCAAGGAACCGGAAGATCACAGCTGGCAAATCTG
GACCGTTAAACGAGGTGGCGGCGGCTCTGCTGCTCGGCCATGGCTGTTACAGCTGCTATTCTTTAACATCAAATCTCAGCCAAGTTCCACAACCTTCCCTTCGCTTCCTT
GCTCTTTTCATTCCTGGTCCTCAAATTACATCGCAATTCGATTTTGGTGCTTGGCAGCGTCTTCGAATTGGTGCAATTCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACGTCATTCCAATTCCAGTGGGTGCTCGCACATGGGATTCTTTCCCCGGGGGCTGCGCCTCCCGTTTTCGTGGCGGACGTGTCTTATCACGTGTGGCCGCACGT
ACGCTCATCAACGTGCATCCACTCTACTGTTGCGGCGGGAGATTTTGATTTCCGCTGTGATGTCCCCACTGCCACGTCAAGGAACCGGAAGATCACAGCTGGCAAATCTG
GACCGTTAAACGAGGTGGCGGCGGCTCTGCTGCTCGGCCATGGCTGTTACAGCTGCTATTCTTTAACATCAAATCTCAGCCAAGTTCCACAACCTTCCCTTCGCTTCCTT
GCTCTTTTCATTCCTGGTCCTCAAATTACATCGCAATTCGATTTTGGTGCTTGGCAGCGTCTTCGAATTGGTGCAATTCCGTGA
Protein sequenceShow/hide protein sequence
MATSFQFQWVLAHGILSPGAAPPVFVADVSYHVWPHVRSSTCIHSTVAAGDFDFRCDVPTATSRNRKITAGKSGPLNEVAAALLLGHGCYSCYSLTSNLSQVPQPSLRFL
ALFIPGPQITSQFDFGAWQRLRIGAIP