; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034243 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034243
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationscaffold13:37189891..37192101
RNA-Seq ExpressionSpg034243
SyntenySpg034243
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TKY74785.1 CCR4-associated factor 1-like 7 [Spatholobus suberectus]4.6e-14091.89Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIREVWN NLEEEFALIREIVDE+NY+AMDTEFPGVVLRP+G FKNINDYNYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTD F IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNISED+FASDSIELLRQCGIDFKKNNE+GIDVNRFGELLMSSG+VLND V+WVTFHSGYDFGYLLKLLTCRSLP++QAGFFDLI IYFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELL+VER+GVCHQAGSDSLLT+CTFRKLRDTFFNGST+KYA
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

XP_021686091.1 probable CCR4-associated factor 1 homolog 7 [Hevea brasiliensis]6.1e-14091.12Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSI+PKGDSIQIREVWN NLEEEFALIREIVD FNY+AMDTEFPGVVLRP+G FKNINDYNYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTD F IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNISED+FASDSIELLRQCGIDFKKNNE+GIDVNRFGELLMSSG+VLNDGV+WVTFHSGYDFGYLLKLLTCRSLP++QAGFFDLIN+YFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELL+VER+GVCHQAGSDSLLT+CTFRKLRD FF+GST+KYA
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

XP_022132176.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]4.6e-14092.28Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKG+SI IREVW+ NLEEEFAL+REIVD+FNYIAMDTEFPGVVLRP+GAFKNIN+YNYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNISED+FASDSIELLRQCGIDFKKNNEEGIDVNRF ELLMSSG+VLND VNWVTFHSGYDFGYLLKLLTCRSLP++QAGFFDLIN+YFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNS HGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

XP_022132308.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]2.4e-14495.37Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIREVWN NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+GAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFN+SED+FASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCR+LP++QAGFFDLINIYFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGST+KYA
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

XP_038885551.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]9.4e-14193.44Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIND+NY+TLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNI  D+FASDSIELLRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLN+ VNWVTFHSGYDFGYLLKLLTCR LP  QAGFF+LIN+YFPVVYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYA
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

TrEMBL top hitse value%identityAlignment
A0A2C9UB26 Poly(A)-specific ribonuclease6.5e-14091.12Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSI+PKGDSIQIREVWN NLEEEFALIREIVD+FNY+AMDTEFPGVVLRP+G FKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLP+CGTDK  IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNISED+FASDSIELLRQCGIDFKKNNE+GIDVNRFGELLMSSG+VLNDGV+WVTFHSGYDFGYLLKLLTCRSLP++QAGFFDLIN+YFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELL+VER+GVCHQAGSDSLLT+CTFRKLRD FF+GST+KYA
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

A0A6J1BRI8 Poly(A)-specific ribonuclease2.2e-14092.28Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKG+SI IREVW+ NLEEEFAL+REIVD+FNYIAMDTEFPGVVLRP+GAFKNIN+YNYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNISED+FASDSIELLRQCGIDFKKNNEEGIDVNRF ELLMSSG+VLND VNWVTFHSGYDFGYLLKLLTCRSLP++QAGFFDLIN+YFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNS HGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

A0A6J1BVW9 Poly(A)-specific ribonuclease1.2e-14495.37Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIREVWN NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+GAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFN+SED+FASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCR+LP++QAGFFDLINIYFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGST+KYA
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

A0A6P9DT50 Poly(A)-specific ribonuclease6.5e-14091.51Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIR+VWN NLEEEFALIRE+VD +NYIAMDTEFPGVVLRP+G FKNINDYNYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTD F IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNISED+FASDSIELL Q GIDFKKNNE+GIDVNRFGELLMSSG+VLNDGV+WVTFHSGYDFGYLLKLLTCRSLP++QAGFFDLIN+YFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELLDVER+GVCHQAGSDSLLTACTFRKLRDTFFNGST+KYA
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

A0A7J6E4Y5 Poly(A)-specific ribonuclease5.0e-14092.66Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSIL KGDSI IREVWN NL+EEFALIR+IVD FNYIAMDTEFPGVVLRP+G FKNINDYNYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNISEDVFASDSIELLRQCGIDFKKNNE+GIDVNRFGELLMSSG+VLNDGVNWVTFHSGYDFGYLLKLLTCRSLP+SQA FFDLINIYFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELLDVER+GVCHQAGSDSLLTACTFRKLR+TFF+GST+KYA
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

SwissProt top hitse value%identityAlignment
Q3ZC01 CCR4-NOT transcription complex subunit 79.6e-8058.02Show/hide
Query:  SIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNI
        S +I EVW  NL+EE   IR+++ ++NY+AMDTEFPGVV RP+G F++  DY YQ L+ NVD+LK+IQLGLTF +E+G  P  GT     WQFNF+ FN+
Subjt:  SIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNI

Query:  SEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMKFCN
        +ED++A DSIELL   GI FKK+ EEGI+   F ELLM+SGVVL +GV W++FHSGYDFGYL+K+LT  +LPE +  FF+++ ++FPV+YD+K+LMK C 
Subjt:  SEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMKFCN

Query:  SLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFF
        +L GGL ++AE L++ERIG  HQAGSDSLLT   F K+R+ FF
Subjt:  SLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFF

Q9LEU4 Probable CCR4-associated factor 1 homolog 103.2e-11575.89Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFRE
        K DSI IREVW+ NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NY+TLK+NVD+LKLIQ+GLTFSDE GNLPTCGTDKF IWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFRE

Query:  FNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMK
        FNI ED++AS+SIELLRQCGIDFKKN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA FF L+ +YFP VYDIKHLM 
Subjt:  FNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMK

Query:  FCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKY
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY
Subjt:  FCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKY

Q9S9P2 Probable CCR4-associated factor 1 homolog 26.2e-9564.73Show/hide
Query:  DSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIN------DYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQF
        D+I+IREVWN NLE+E ALI + +D+F Y+AMDTEFPG+V + + A  N N      +YNY TLK NV+MLKLIQLGLT SDEKGNLPTCGT+K  IWQF
Subjt:  DSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIN------DYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQF

Query:  NFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIK
        NFREFN+  D+FA DSIELLR+  ID +KNNE G+D  RF ELLM SGVVLND ++WVTFH GYDFGYLLKLL+ + LPE  + FFD +  +FPVVYDIK
Subjt:  NFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIK

Query:  HLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        +LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  TF K+++ FF GS  KY+
Subjt:  HLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.8e-11572.97Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK NV++LK+IQLGLTFS+E+GNLPTCGTDK+ IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREF++  D+FA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LP+SQ  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

Q9SKZ2 Probable CCR4-associated factor 1 homolog 75.2e-11875Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTD-KFFIW
        MS+  K DSIQIREVWN NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y+Y+TLK NV++LK+IQLGLTFSDEKGNLPTCGTD K+ IW
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTD-KFFIW

Query:  QFNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYD
        QFNFREF++  D++A+DSIELLRQ GIDF KNNE GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LPE+Q GFF++I++YFP VYD
Subjt:  QFNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYD

Query:  IKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        IKHLMKFCNSLHGGLNKLAELLDVER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+
Subjt:  IKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-11672.97Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK NV++LK+IQLGLTFS+E+GNLPTCGTDK+ IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREF++  D+FA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LP+SQ  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-11672.97Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK NV++LK+IQLGLTFS+E+GNLPTCGTDK+ IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREF++  D+FA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LP+SQ  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-11672.97Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK NV++LK+IQLGLTFS+E+GNLPTCGTDK+ IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREF++  D+FA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LP+SQ  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.7e-11975Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTD-KFFIW
        MS+  K DSIQIREVWN NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y+Y+TLK NV++LK+IQLGLTFSDEKGNLPTCGTD K+ IW
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTD-KFFIW

Query:  QFNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYD
        QFNFREF++  D++A+DSIELLRQ GIDF KNNE GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LPE+Q GFF++I++YFP VYD
Subjt:  QFNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYD

Query:  IKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA
        IKHLMKFCNSLHGGLNKLAELLDVER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+
Subjt:  IKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYA

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.2e-11675.89Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFRE
        K DSI IREVW+ NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NY+TLK+NVD+LKLIQ+GLTFSDE GNLPTCGTDKF IWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFRE

Query:  FNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMK
        FNI ED++AS+SIELLRQCGIDFKKN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA FF L+ +YFP VYDIKHLM 
Subjt:  FNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMK

Query:  FCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKY
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY
Subjt:  FCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTACCGAAGGGCGATTCGATTCAAATCCGTGAGGTGTGGAACGCGAATTTGGAGGAGGAGTTTGCGCTTATCCGGGAAATTGTTGATGAATTTAATTACAT
AGCGATGGATACCGAGTTCCCCGGAGTGGTGCTTCGTCCGCTTGGTGCTTTTAAGAATATCAACGATTACAACTACCAGACTCTCAAAGATAATGTTGATATGTTGAAGT
TGATTCAATTGGGTCTTACGTTCTCTGATGAGAAGGGAAATCTCCCGACTTGTGGAACGGATAAGTTTTTTATTTGGCAGTTTAATTTCCGCGAGTTCAACATTAGTGAA
GATGTTTTTGCCAGTGATTCGATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTAAGAAGAACAATGAAGAGGGTATCGATGTCAATCGATTTGGTGAGCTTCTAATGTC
TTCTGGGGTTGTGTTAAACGATGGTGTTAACTGGGTGACATTCCACAGTGGATATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAAGCTTACCAGAATCGCAGG
CGGGATTTTTTGATTTGATCAACATCTATTTTCCTGTGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCATGGTGGATTGAACAAGCTTGCGGAGTTA
TTAGATGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACTTTTTTCAATGGATCTACACAGAA
ATACGCAGTAAAGCACTTGTTATCTTTCTCTTCCTATAGAACATTTGCAGAACTCTGCCCATACGTCTGTTTTGAGATGGCTAAAGTTTCAACTGCTGGTATGGTTGCAG
AGTTCAGAGGCGTATCTTTGGCTCAGAACATCAGAACGGAATGCAAGAGCCGTGGAGATTTTACACCCCTGTTAATTTTTCTTCAGACAGAGCCTGGAAAGGAAACCAAG
AAGAAGATTTCAAACTTGGGAATTTGGGAAGCTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTTTACCGAAGGGCGATTCGATTCAAATCCGTGAGGTGTGGAACGCGAATTTGGAGGAGGAGTTTGCGCTTATCCGGGAAATTGTTGATGAATTTAATTACAT
AGCGATGGATACCGAGTTCCCCGGAGTGGTGCTTCGTCCGCTTGGTGCTTTTAAGAATATCAACGATTACAACTACCAGACTCTCAAAGATAATGTTGATATGTTGAAGT
TGATTCAATTGGGTCTTACGTTCTCTGATGAGAAGGGAAATCTCCCGACTTGTGGAACGGATAAGTTTTTTATTTGGCAGTTTAATTTCCGCGAGTTCAACATTAGTGAA
GATGTTTTTGCCAGTGATTCGATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTAAGAAGAACAATGAAGAGGGTATCGATGTCAATCGATTTGGTGAGCTTCTAATGTC
TTCTGGGGTTGTGTTAAACGATGGTGTTAACTGGGTGACATTCCACAGTGGATATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAAGCTTACCAGAATCGCAGG
CGGGATTTTTTGATTTGATCAACATCTATTTTCCTGTGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCATGGTGGATTGAACAAGCTTGCGGAGTTA
TTAGATGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACTTTTTTCAATGGATCTACACAGAA
ATACGCAGTAAAGCACTTGTTATCTTTCTCTTCCTATAGAACATTTGCAGAACTCTGCCCATACGTCTGTTTTGAGATGGCTAAAGTTTCAACTGCTGGTATGGTTGCAG
AGTTCAGAGGCGTATCTTTGGCTCAGAACATCAGAACGGAATGCAAGAGCCGTGGAGATTTTACACCCCTGTTAATTTTTCTTCAGACAGAGCCTGGAAAGGAAACCAAG
AAGAAGATTTCAAACTTGGGAATTTGGGAAGCTAGTTGA
Protein sequenceShow/hide protein sequence
MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISE
DVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAEL
LDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAVKHLLSFSSYRTFAELCPYVCFEMAKVSTAGMVAEFRGVSLAQNIRTECKSRGDFTPLLIFLQTEPGKETK
KKISNLGIWEAS