; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034255 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034255
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionmethyl-CpG-binding domain-containing protein 8-like
Genome locationscaffold13:34429779..34430387
RNA-Seq ExpressionSpg034255
SyntenySpg034255
Gene Ontology termsNA
InterPro domainsIPR037472 - Methyl-CpG-binding domain-containing protein 8


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132084.1 methyl-CpG-binding domain-containing protein 8 isoform X2 [Momordica charantia]3.6e-9291.58Show/hide
Query:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT
        MNTLPIIDLRLLSQSELYCLSRF  SSSSSSTSQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSS IRPQSP+RLD ESA+IIT
Subjt:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT

Query:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMV
        LFKQLFVG+SHC V+++Y D DEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKD NRF QSNGNA PNSKSGCEKRAEEEEIVMV
Subjt:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMV

Query:  ML
        ML
Subjt:  ML

XP_022952017.1 methyl-CpG-binding domain-containing protein 8-like isoform X1 [Cucurbita moschata]5.2e-9191.46Show/hide
Query:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT
        MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+T
Subjt:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT

Query:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVM
        LFKQLFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVM
Subjt:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVM

XP_022952018.1 methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita moschata]1.6e-9291.58Show/hide
Query:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT
        MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+T
Subjt:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT

Query:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMV
        LFKQLFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVMV
Subjt:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMV

Query:  ML
        ML
Subjt:  ML

XP_023002677.1 methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita maxima]1.6e-9291.58Show/hide
Query:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT
        MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+T
Subjt:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT

Query:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMV
        LFKQLFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVMV
Subjt:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMV

Query:  ML
        ML
Subjt:  ML

XP_038885026.1 methyl-CpG-binding domain-containing protein 8 isoform X2 [Benincasa hispida]2.4e-9189.47Show/hide
Query:  MNTLPIIDLRLLSQSELYCLSRF-SSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQII
        MN LPIIDLRLLSQSELYCLSRF SSSSSSSSTSQSNN+DDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQF SSSSSSTIRPQSPDRLD ESAQI+
Subjt:  MNTLPIIDLRLLSQSELYCLSRF-SSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQII

Query:  TLFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRA------E
        TLFKQLFVG+ HCAVND+Y DGDEDLVL+NHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNAAP  KSGC+K A      E
Subjt:  TLFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRA------E

Query:  EEEIVMVML
        EEEIVMVML
Subjt:  EEEIVMVML

TrEMBL top hitse value%identityAlignment
A0A6J1BS27 methyl-CpG-binding domain-containing protein 8 isoform X21.8e-9291.58Show/hide
Query:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT
        MNTLPIIDLRLLSQSELYCLSRF  SSSSSSTSQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSS IRPQSP+RLD ESA+IIT
Subjt:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT

Query:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMV
        LFKQLFVG+SHC V+++Y D DEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKD NRF QSNGNA PNSKSGCEKRAEEEEIVMV
Subjt:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMV

Query:  ML
        ML
Subjt:  ML

A0A6J1GJ84 methyl-CpG-binding domain-containing protein 8-like isoform X12.5e-9191.46Show/hide
Query:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT
        MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+T
Subjt:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT

Query:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVM
        LFKQLFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVM
Subjt:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVM

A0A6J1GJB3 methyl-CpG-binding domain-containing protein 8-like isoform X27.9e-9391.58Show/hide
Query:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT
        MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+T
Subjt:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT

Query:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMV
        LFKQLFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVMV
Subjt:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMV

Query:  ML
        ML
Subjt:  ML

A0A6J1KK67 methyl-CpG-binding domain-containing protein 8-like isoform X27.9e-9391.58Show/hide
Query:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT
        MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+T
Subjt:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT

Query:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMV
        LFKQLFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVMV
Subjt:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMV

Query:  ML
        ML
Subjt:  ML

A0A6J1KLZ0 methyl-CpG-binding domain-containing protein 8-like isoform X12.5e-9191.46Show/hide
Query:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT
        MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+T
Subjt:  MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT

Query:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVM
        LFKQLFVGESHC VND+YDDGDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNAA NS SGC+KRAEE+EIVM
Subjt:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVM

SwissProt top hitse value%identityAlignment
Q9LME6 Methyl-CpG-binding domain-containing protein 81.6e-1845.76Show/hide
Query:  TLPIIDLRLLSQSELYCLSRFSSSSSSSSTS--QSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT
        +LP+ID RLLSQSEL  LS+ SS S SSS S   S   DD L PKIDRSVFNESAGSRKQT+ RLRLA R PQ P    S   + Q  D    E  Q+ +
Subjt:  TLPIIDLRLLSQSELYCLSRFSSSSSSSSTS--QSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT

Query:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDGN
        L + LF  +S+ +  +  D+G+E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Subjt:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDGN

Arabidopsis top hitse value%identityAlignment
AT1G22310.2 methyl-CPG-binding domain 81.2e-1945.76Show/hide
Query:  TLPIIDLRLLSQSELYCLSRFSSSSSSSSTS--QSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT
        +LP+ID RLLSQSEL  LS+ SS S SSS S   S   DD L PKIDRSVFNESAGSRKQT+ RLRLA R PQ P    S   + Q  D    E  Q+ +
Subjt:  TLPIIDLRLLSQSELYCLSRFSSSSSSSSTS--QSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIIT

Query:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDGN
        L + LF  +S+ +  +  D+G+E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Subjt:  LFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACTCTCCCCATCATAGATCTCCGCCTCCTCTCCCAATCCGAGCTCTATTGTCTCTCTCGTTTCTCCTCCTCGTCTTCTTCTTCCTCAACCTCCCAATCCAACAA
CGACGACGACGTTCTCATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGGAAACAAACCTATTCCCGCCTCCGTCTCGCCCCTCGCAAACCCCAAT
TTCCCTCCTCCTCCTCCTCCTCCACAATTCGCCCCCAATCCCCTGACCGCCTCGATGTAGAGAGCGCCCAGATTATTACTCTCTTCAAGCAGCTCTTCGTTGGGGAATCT
CATTGTGCCGTCAACGACACCTACGACGATGGAGATGAGGACCTGGTCCTTATCAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCGATTTTCCAGAGCAT
TCCTGTTGATATCATCGACAGCAGTTACGCTCCGATTAAGCGGCGGAGAGGGCGGCCGCGGAAGGATGGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGAACT
CCAAAAGCGGATGCGAAAAACGGGCGGAGGAGGAGGAGATCGTAATGGTAATGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATACTCTCCCCATCATAGATCTCCGCCTCCTCTCCCAATCCGAGCTCTATTGTCTCTCTCGTTTCTCCTCCTCGTCTTCTTCTTCCTCAACCTCCCAATCCAACAA
CGACGACGACGTTCTCATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGGAAACAAACCTATTCCCGCCTCCGTCTCGCCCCTCGCAAACCCCAAT
TTCCCTCCTCCTCCTCCTCCTCCACAATTCGCCCCCAATCCCCTGACCGCCTCGATGTAGAGAGCGCCCAGATTATTACTCTCTTCAAGCAGCTCTTCGTTGGGGAATCT
CATTGTGCCGTCAACGACACCTACGACGATGGAGATGAGGACCTGGTCCTTATCAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCGATTTTCCAGAGCAT
TCCTGTTGATATCATCGACAGCAGTTACGCTCCGATTAAGCGGCGGAGAGGGCGGCCGCGGAAGGATGGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGAACT
CCAAAAGCGGATGCGAAAAACGGGCGGAGGAGGAGGAGATCGTAATGGTAATGCTGTGA
Protein sequenceShow/hide protein sequence
MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGES
HCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMVML