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Spg034268 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034268
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Genome locationscaffold10:21088104..21094131
RNA-Seq ExpressionSpg034268
SyntenySpg034268
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]1.4e-0531.15Show/hide
Query:  APTETEKADTEELRLSYNRFINDLARAKYLEMLKRDFLFE----------RGFGDDLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQA
        APT+T          ++ +F ND A+A++     R   FE           GFG D+ + +    T   W +F   P SVN+++V+EFY NI +   +  
Subjt:  APTETEKADTEELRLSYNRFINDLARAKYLEMLKRDFLFE----------RGFGDDLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQA

Query:  IVRGLAVDWSLGAVNSLFNLQD
         VRG  + ++  A+N  F+LQD
Subjt:  IVRGLAVDWSLGAVNSLFNLQD

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]1.1e-0531.63Show/hide
Query:  FINDLARAKYLEMLKRDFLFERGF------GDDLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGAVNSLFNLQ
        F+++ A+  Y  +  R   FE GF        +L + +    T H W +F   P  VN+ +V+EFY+NI E      +VRG+++ ++  A+N  F LQ
Subjt:  FINDLARAKYLEMLKRDFLFERGF------GDDLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGAVNSLFNLQ

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]1.4e-0533.62Show/hide
Query:  NDLARAKYLEMLK-RDFLFERGF-GD-----DLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGAVNSLFNLQDFP
        ++ A  +Y E ++ R    E+GF GD     + P FI    T H+W  FCA PE + + +VREFY N+   +     VRG+ V  S  A+N+++ L D P
Subjt:  NDLARAKYLEMLK-RDFLFERGF-GD-----DLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGAVNSLFNLQDFP

Query:  HVGYNEMAAAPSNEQL
           ++E   A +  +L
Subjt:  HVGYNEMAAAPSNEQL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]8.1e-0634.15Show/hide
Query:  GVVEAPTETEKADTEELRLSYNRFINDLARAKYLEMLKRDFLFERGFGDD-------LPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQ
        G+     +  KA   E   +  R+ N++          R    E+GF  D       LP FI    T H+W QFCA PE     +VREFY N+ + E   
Subjt:  GVVEAPTETEKADTEELRLSYNRFINDLARAKYLEMLKRDFLFERGFGDD-------LPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQ

Query:  AIVRGLAVDWSLGAVNSLFNLQD
          VRG+ V WS  A+N++F L D
Subjt:  AIVRGLAVDWSLGAVNSLFNLQD

RYE21173.1 hypothetical protein EOP45_09925 [Sphingobacteriaceae bacterium]2.8e-0630.94Show/hide
Query:  LSYNR--FINDLARAKYLEMLKRDFLFERG--------FGDDLPNFIRAGTTNHSWDQFCAKPE-SVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGA
        + YN   F +  A  +Y  +++R  +FERG         G  + N I       SW +FCA PE   N  ++ EFY N+ + E     VRG+ VD S+GA
Subjt:  LSYNR--FINDLARAKYLEMLKRDFLFERG--------FGDDLPNFIRAGTTNHSWDQFCAKPE-SVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGA

Query:  VNSLFNLQD--FPHVGYNEMAAAPSNEQLNAAVREMLEN
        +N+L    D  F + GY +    P+ +++ + +    EN
Subjt:  VNSLFNLQD--FPHVGYNEMAAAPSNEQLNAAVREMLEN

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein6.7e-0633.62Show/hide
Query:  NDLARAKYLEMLK-RDFLFERGF-GD-----DLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGAVNSLFNLQDFP
        ++ A  +Y E ++ R    E+GF GD     + P FI    T H+W  FCA PE + + +VREFY N+   +     VRG+ V  S  A+N+++ L D P
Subjt:  NDLARAKYLEMLK-RDFLFERGF-GD-----DLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGAVNSLFNLQDFP

Query:  HVGYNEMAAAPSNEQL
           ++E   A +  +L
Subjt:  HVGYNEMAAAPSNEQL

A0A2P5BCG4 Uncharacterized protein (Fragment)3.9e-0634.15Show/hide
Query:  GVVEAPTETEKADTEELRLSYNRFINDLARAKYLEMLKRDFLFERGFGDD-------LPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQ
        G+     +  KA   E   +  R+ N++          R    E+GF  D       LP FI    T H+W QFCA PE     +VREFY N+ + E   
Subjt:  GVVEAPTETEKADTEELRLSYNRFINDLARAKYLEMLKRDFLFERGFGDD-------LPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQ

Query:  AIVRGLAVDWSLGAVNSLFNLQD
          VRG+ V WS  A+N++F L D
Subjt:  AIVRGLAVDWSLGAVNSLFNLQD

A0A4Q3ENY7 Uncharacterized protein1.3e-0630.94Show/hide
Query:  LSYNR--FINDLARAKYLEMLKRDFLFERG--------FGDDLPNFIRAGTTNHSWDQFCAKPE-SVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGA
        + YN   F +  A  +Y  +++R  +FERG         G  + N I       SW +FCA PE   N  ++ EFY N+ + E     VRG+ VD S+GA
Subjt:  LSYNR--FINDLARAKYLEMLKRDFLFERG--------FGDDLPNFIRAGTTNHSWDQFCAKPE-SVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGA

Query:  VNSLFNLQD--FPHVGYNEMAAAPSNEQLNAAVREMLEN
        +N+L    D  F + GY +    P+ +++ + +    EN
Subjt:  VNSLFNLQD--FPHVGYNEMAAAPSNEQLNAAVREMLEN

A0A6A2WM54 Uncharacterized protein6.7e-0631.15Show/hide
Query:  APTETEKADTEELRLSYNRFINDLARAKYLEMLKRDFLFE----------RGFGDDLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQA
        APT+T          ++ +F ND A+A++     R   FE           GFG D+ + +    T   W +F   P SVN+++V+EFY NI +   +  
Subjt:  APTETEKADTEELRLSYNRFINDLARAKYLEMLKRDFLFE----------RGFGDDLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQA

Query:  IVRGLAVDWSLGAVNSLFNLQD
         VRG  + ++  A+N  F+LQD
Subjt:  IVRGLAVDWSLGAVNSLFNLQD

A0A6A2ZUE4 Uncharacterized protein5.1e-0631.63Show/hide
Query:  FINDLARAKYLEMLKRDFLFERGF------GDDLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGAVNSLFNLQ
        F+++ A+  Y  +  R   FE GF        +L + +    T H W +F   P  VN+ +V+EFY+NI E      +VRG+++ ++  A+N  F LQ
Subjt:  FINDLARAKYLEMLKRDFLFERGF------GDDLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGAVNSLFNLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACCGAATGGAAAAGCTAATGTTGGAAATGGTCTTAAGAAATCCTATCCATTTTTGGAGTTTGCGTTGTTCCGATCTCCATGTTACAACCCTCCGAATGGTAGGAG
GTGTTTCGTAAACCGTCAACATAAATACCTCCAGCCTTATACAACATCTTGCCAGTGTAAAAAGGCTGAAGCAGCTGCCTTCAGACTGAACCGGACCCAAAATAACCAGC
TGGACCAAACCGGATCTAGAAATCAGACGCGCCTGGATGAATTGTTGAACAGCGTCGATACGCTTCATGAACAGCGTCCCGACGCTGTCTCGACCAGCAGCTACTCTCAA
ATGGATGGACCTCCTTGGATTCTTGTCTTTTCCAATCTTCTTAGGGCAACCCATAGTGTCTTCCCTACTATTCTTCGGGCCAAGAACGACTTGTGGGAGTCTATTGAGAT
AGGGAATGGGAAGGGAATACTGGAAGATATTGCTGAAGAAGTGGTTGAGGTAGAACAACCAAAGAACCCTGAGGAAAAGAAAGATGCTGAGCAGAGTGAATCGACAAAAG
AAGAAACTGGAAAGAAGGCTGAAGAAGAAGCCCTGACAAAGCAAAGAGAGGACAAGGGCAAAGGAGTTGTTGAAGCCCCGACAGAGACAGAAAAGGCTGATACAGAGGAA
CTGAGACTGTCGTATAATCGCTTCATTAATGATCTTGCCCGAGCAAAATATTTAGAGATGCTGAAAAGGGATTTTCTGTTTGAAAGGGGATTCGGTGATGATCTGCCAAA
TTTCATAAGAGCTGGAACTACAAATCATAGTTGGGATCAGTTTTGCGCGAAACCAGAATCGGTAAATTCGAATGTTGTTCGTGAATTTTACACGAATATAGATGAAGAAG
AGGGGTTTCAAGCAATTGTCCGTGGTTTGGCAGTCGATTGGAGCCTTGGTGCGGTAAATTCTCTATTTAATCTTCAAGATTTCCCACATGTCGGATATAATGAGATGGCG
GCAGCGCCATCTAATGAGCAGTTGAACGCAGCTGTTCGAGAGATGTTGGAAAATTTATCTCCATTGAAAGACATTCCTGTTGGAGGAAGAAGGCACGTTGAACCTGGCAA
GGCTTCAGAGGACTCAATAAGCACGCCAAGGCGGTTTGGTGTGCGGCATCCATCAAATGCAAGAACAACTGCAAATGCATTCCAGCAGAATGGAGTTTTCCGGAAGGCAA
TATCAAACATTCTGGAATTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTACCGAATGGAAAAGCTAATGTTGGAAATGGTCTTAAGAAATCCTATCCATTTTTGGAGTTTGCGTTGTTCCGATCTCCATGTTACAACCCTCCGAATGGTAGGAG
GTGTTTCGTAAACCGTCAACATAAATACCTCCAGCCTTATACAACATCTTGCCAGTGTAAAAAGGCTGAAGCAGCTGCCTTCAGACTGAACCGGACCCAAAATAACCAGC
TGGACCAAACCGGATCTAGAAATCAGACGCGCCTGGATGAATTGTTGAACAGCGTCGATACGCTTCATGAACAGCGTCCCGACGCTGTCTCGACCAGCAGCTACTCTCAA
ATGGATGGACCTCCTTGGATTCTTGTCTTTTCCAATCTTCTTAGGGCAACCCATAGTGTCTTCCCTACTATTCTTCGGGCCAAGAACGACTTGTGGGAGTCTATTGAGAT
AGGGAATGGGAAGGGAATACTGGAAGATATTGCTGAAGAAGTGGTTGAGGTAGAACAACCAAAGAACCCTGAGGAAAAGAAAGATGCTGAGCAGAGTGAATCGACAAAAG
AAGAAACTGGAAAGAAGGCTGAAGAAGAAGCCCTGACAAAGCAAAGAGAGGACAAGGGCAAAGGAGTTGTTGAAGCCCCGACAGAGACAGAAAAGGCTGATACAGAGGAA
CTGAGACTGTCGTATAATCGCTTCATTAATGATCTTGCCCGAGCAAAATATTTAGAGATGCTGAAAAGGGATTTTCTGTTTGAAAGGGGATTCGGTGATGATCTGCCAAA
TTTCATAAGAGCTGGAACTACAAATCATAGTTGGGATCAGTTTTGCGCGAAACCAGAATCGGTAAATTCGAATGTTGTTCGTGAATTTTACACGAATATAGATGAAGAAG
AGGGGTTTCAAGCAATTGTCCGTGGTTTGGCAGTCGATTGGAGCCTTGGTGCGGTAAATTCTCTATTTAATCTTCAAGATTTCCCACATGTCGGATATAATGAGATGGCG
GCAGCGCCATCTAATGAGCAGTTGAACGCAGCTGTTCGAGAGATGTTGGAAAATTTATCTCCATTGAAAGACATTCCTGTTGGAGGAAGAAGGCACGTTGAACCTGGCAA
GGCTTCAGAGGACTCAATAAGCACGCCAAGGCGGTTTGGTGTGCGGCATCCATCAAATGCAAGAACAACTGCAAATGCATTCCAGCAGAATGGAGTTTTCCGGAAGGCAA
TATCAAACATTCTGGAATTTTGTTAA
Protein sequenceShow/hide protein sequence
MLPNGKANVGNGLKKSYPFLEFALFRSPCYNPPNGRRCFVNRQHKYLQPYTTSCQCKKAEAAAFRLNRTQNNQLDQTGSRNQTRLDELLNSVDTLHEQRPDAVSTSSYSQ
MDGPPWILVFSNLLRATHSVFPTILRAKNDLWESIEIGNGKGILEDIAEEVVEVEQPKNPEEKKDAEQSESTKEETGKKAEEEALTKQREDKGKGVVEAPTETEKADTEE
LRLSYNRFINDLARAKYLEMLKRDFLFERGFGDDLPNFIRAGTTNHSWDQFCAKPESVNSNVVREFYTNIDEEEGFQAIVRGLAVDWSLGAVNSLFNLQDFPHVGYNEMA
AAPSNEQLNAAVREMLENLSPLKDIPVGGRRHVEPGKASEDSISTPRRFGVRHPSNARTTANAFQQNGVFRKAISNILEFC