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Spg034281 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034281
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L13
Genome locationscaffold10:21001457..21005685
RNA-Seq ExpressionSpg034281
SyntenySpg034281
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001380 - Ribosomal protein L13e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014861.1 hypothetical protein SDJN02_22491, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-1265.08Show/hide
Query:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        N  QEKA KNFPRPTAG  RPIVHGQTLKY MK+R+GRGFSLEELK   +P      I I ++
Subjt:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

XP_022141234.1 60S ribosomal protein L13-1 [Momordica charantia]3.5e-1265.08Show/hide
Query:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        N  QEKA KNFPRPTAG  RPIVHGQTLKY MK+R+GRGFSLEELK   +P      I I ++
Subjt:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

XP_022969755.1 60S ribosomal protein L13-3-like [Cucurbita maxima]1.2e-1265.08Show/hide
Query:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        N+ QEKA KNFPRPTAG  RPIVHGQTLKY MK+R+GRGFSLEELK   +P      I I ++
Subjt:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

XP_022990054.1 60S ribosomal protein L13-1-like [Cucurbita maxima]3.5e-1265.08Show/hide
Query:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        N  QEKA KNFPRPTAG  RPIVHGQTLKY MK+R+GRGFSLEELK   +P      I I ++
Subjt:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

XP_023550831.1 60S ribosomal protein L13-3-like [Cucurbita pepo subsp. pepo]3.5e-1265.08Show/hide
Query:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        N  QEKA KNFPRPTAG  RPIVHGQTLKY MK+R+GRGFSLEELK   +P      I I ++
Subjt:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

TrEMBL top hitse value%identityAlignment
A0A6J1E5R8 60S ribosomal protein L131.7e-1265.08Show/hide
Query:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        N  QEKA KNFPRPTAG  RPIVHGQTLKY MK+R+GRGFSLEELK   +P      I I ++
Subjt:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

A0A6J1FUT5 60S ribosomal protein L131.7e-1265.08Show/hide
Query:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        N  QEKA KNFPRPTAG  RPIVHGQTLKY MK+R+GRGFSLEELK   +P      I I ++
Subjt:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

A0A6J1I0U7 60S ribosomal protein L135.7e-1365.08Show/hide
Query:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        N+ QEKA KNFPRPTAG  RPIVHGQTLKY MK+R+GRGFSLEELK   +P      I I ++
Subjt:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

A0A6J1J2K7 60S ribosomal protein L131.7e-1265.08Show/hide
Query:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        N  QEKA KNFPRPTAG  RPIVHGQTLKY MK+R+GRGFSLEELK   +P      I I ++
Subjt:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

A0A6J1JSD3 60S ribosomal protein L131.7e-1265.08Show/hide
Query:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        N  QEKA KNFPRPTAG  RPIVHGQTLKY MK+R+GRGFSLEELK   +P      I I ++
Subjt:  NIHQEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

SwissProt top hitse value%identityAlignment
P41127 60S ribosomal protein L13-18.0e-1256.67Show/hide
Query:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        Q+KA K FPRPT+G  RP+VHGQTLKY MK+R+G+GF+LEELK   +P      I I ++
Subjt:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

P41128 60S ribosomal protein L13-16.1e-1258.33Show/hide
Query:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        Q+KA K FPRPTAG  RP+VHGQTLKY MK+R+G+GF+LEELK   +P      I I ++
Subjt:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

P41129 60S ribosomal protein L13-21.6e-1260Show/hide
Query:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        Q+KA K FPRPTAG  RP+VHGQTLKY MK+R+G+GF+LEELK   +P      I I L+
Subjt:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

P49627 60S ribosomal protein L131.6e-1263.33Show/hide
Query:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        Q+KA K  PRPTAG  RPIVHGQTLKY MK+RSGRGFSLEELK   +P      I I ++
Subjt:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

Q9FF90 60S ribosomal protein L13-32.7e-1258.33Show/hide
Query:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        Q+KA K FPRPT+G  RP+VHGQTLKY MK+R+G+GF+LEELKV  +P      I I ++
Subjt:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

Arabidopsis top hitse value%identityAlignment
AT3G49010.1 breast basic conserved 15.7e-1356.67Show/hide
Query:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        Q+KA K FPRPT+G  RP+VHGQTLKY MK+R+G+GF+LEELK   +P      I I ++
Subjt:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

AT3G49010.2 breast basic conserved 15.7e-1356.67Show/hide
Query:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        Q+KA K FPRPT+G  RP+VHGQTLKY MK+R+G+GF+LEELK   +P      I I ++
Subjt:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

AT3G49010.3 breast basic conserved 15.7e-1356.67Show/hide
Query:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        Q+KA K FPRPT+G  RP+VHGQTLKY MK+R+G+GF+LEELK   +P      I I ++
Subjt:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

AT3G49010.4 breast basic conserved 15.7e-1356.67Show/hide
Query:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        Q+KA K FPRPT+G  RP+VHGQTLKY MK+R+G+GF+LEELK   +P      I I ++
Subjt:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE

AT5G23900.1 Ribosomal protein L13e family protein2.0e-1358.33Show/hide
Query:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE
        Q+KA K FPRPT+G  RP+VHGQTLKY MK+R+G+GF+LEELKV  +P      I I ++
Subjt:  QEKAGKNFPRPTAGAPRPIVHGQTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAATTGATGATTTGCCTAATTTCGAAAATGAAATAGAAATGCCTGAAATGAATGATTTGTCTGATTTAGAGAATGAGCTTGAAATGCCTATGTTAGGTAATGA
TTTGAATGAAGATGATTACTTGATACATGATAATTTTGAGTCTGATCATGATAATGTTGAATCTATTGAGTCTGATCCATATGAGTATATAGAGTCGAACCCTGAAAGTG
TTATTAATTTTGATTCGGGTCCTGATGATGTGGATAATATTCATCAAGAAAAGGCTGGGAAAAATTTCCCTCGGCCTACTGCTGGAGCACCTCGTCCTATTGTTCATGGA
CAAACATTGAAGTATAAAATGAAAATGAGATCTGGTAGAGGCTTCTCTTTGGAAGAGTTGAAGGTGATGTTGCTTCCCTCCAATCCTCTTGATGCCATAAATATTATGCT
TGAAGGAGCCTGGTTCAAAGAAGCTGAGGCAAGTACCAACCGCCTCACCAACCTCTTGGCTCTTAAAGATTCTTTGATTGCTAAAATACTTGGAGGTGGTGGCAAAGCAT
TGTTGTCTGATCTGAAGTGGCTATTTTCTCTTGCCCAAAAGTTTGGGTATGCTGATTGGATTCGGTTTGATGCATCCATTGTCTGTGTGGCCTTGCTTATTACACTGTTG
GAGCAGATATTGTTTCTCATGGATGCACTGGAAAAGGAAATGATCAGGTATGCCTTACACCGTGATCTGGATATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCAATTGATGATTTGCCTAATTTCGAAAATGAAATAGAAATGCCTGAAATGAATGATTTGTCTGATTTAGAGAATGAGCTTGAAATGCCTATGTTAGGTAATGA
TTTGAATGAAGATGATTACTTGATACATGATAATTTTGAGTCTGATCATGATAATGTTGAATCTATTGAGTCTGATCCATATGAGTATATAGAGTCGAACCCTGAAAGTG
TTATTAATTTTGATTCGGGTCCTGATGATGTGGATAATATTCATCAAGAAAAGGCTGGGAAAAATTTCCCTCGGCCTACTGCTGGAGCACCTCGTCCTATTGTTCATGGA
CAAACATTGAAGTATAAAATGAAAATGAGATCTGGTAGAGGCTTCTCTTTGGAAGAGTTGAAGGTGATGTTGCTTCCCTCCAATCCTCTTGATGCCATAAATATTATGCT
TGAAGGAGCCTGGTTCAAAGAAGCTGAGGCAAGTACCAACCGCCTCACCAACCTCTTGGCTCTTAAAGATTCTTTGATTGCTAAAATACTTGGAGGTGGTGGCAAAGCAT
TGTTGTCTGATCTGAAGTGGCTATTTTCTCTTGCCCAAAAGTTTGGGTATGCTGATTGGATTCGGTTTGATGCATCCATTGTCTGTGTGGCCTTGCTTATTACACTGTTG
GAGCAGATATTGTTTCTCATGGATGCACTGGAAAAGGAAATGATCAGGTATGCCTTACACCGTGATCTGGATATATGA
Protein sequenceShow/hide protein sequence
MSAIDDLPNFENEIEMPEMNDLSDLENELEMPMLGNDLNEDDYLIHDNFESDHDNVESIESDPYEYIESNPESVINFDSGPDDVDNIHQEKAGKNFPRPTAGAPRPIVHG
QTLKYKMKMRSGRGFSLEELKVMLLPSNPLDAINIMLEGAWFKEAEASTNRLTNLLALKDSLIAKILGGGGKALLSDLKWLFSLAQKFGYADWIRFDASIVCVALLITLL
EQILFLMDALEKEMIRYALHRDLDI