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Spg034282 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034282
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold10:21031708..21033015
RNA-Seq ExpressionSpg034282
SyntenySpg034282
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]1.2e-1341.9Show/hide
Query:  WSQFCAKLEPVNSNIVREFYANIDDHEE----FQGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKII
        W QFC + +     +VREFYAN+ +H +     +GA+W+ S  E  +F+ + +K E   W+ F+  RLL  TH S V++DR +L +AI+   SIDVGK+I
Subjt:  WSQFCAKLEPVNSNIVREFYANIDDHEE----FQGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKII

Query:  SSEIL
        S  IL
Subjt:  SSEIL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.0e-0930.2Show/hide
Query:  RFINNLARAKYVEMLR-RDFLFERGFGDD-------LPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYAN-----------------------------
        +F    A  +Y   ++ R    E+GF  D       LP F+   I    W QFCA  E     +VREFYAN                             
Subjt:  RFINNLARAKYVEMLR-RDFLFERGFGDD-------LPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYAN-----------------------------

Query:  ---IDDHEEF------------------QGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIL
           +D+H EF                   GA+W +S     T   + L   A  W  F+K  LLP TH  TVS+DR+LL  ++L   SI+VG++I SEI 
Subjt:  ---IDDHEEF------------------QGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIL

Query:  DC
         C
Subjt:  DC

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.8e-0930.69Show/hide
Query:  RFINNLARAKYVEMLR-RDFLFERGFGDD-------LPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYAN-----------------------------
        +F    A  +Y   ++ R    E+GF  D       LP F+   I    W QFCA  E     +VREFYAN                             
Subjt:  RFINNLARAKYVEMLR-RDFLFERGFGDD-------LPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYAN-----------------------------

Query:  ---IDDHEEF------------------QGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIL
           +D+H EF                   GA+W +S     T   + L   A  W  F+K RLLP TH  TVS+DR+LL  ++L   SI+VG++I SEI 
Subjt:  ---IDDHEEF------------------QGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIL

Query:  DC
         C
Subjt:  DC

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]4.0e-0926.87Show/hide
Query:  RFINNLARAKYVEMLR-------RDFLFERGFGDDLPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYAN------------------------------
        +F +  A  +Y E ++       ++F+++     + P F+   I+   W  FCA  E     +VREFY N                              
Subjt:  RFINNLARAKYVEMLR-------RDFLFERGFGDDLPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYAN------------------------------

Query:  --IDDHEEF------------------QGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILD
          ID+H EF                   GA+W +S     T   + L   A  W  F+K RLLP TH  TVS++ V L +++L   SI+VG++I  EI  
Subjt:  --IDDHEEF------------------QGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILD

Query:  C
        C
Subjt:  C

TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]3.6e-1032.03Show/hide
Query:  ERGFG---DDL---PRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYANIDDHEEFQ------------------------GAKWRLSKTEKRTFQAAYLK
        E+GFG   +DL   P  +R  I  L W +FC      +  +VREFYA++   +  +                        G++W +      + Q  YLK
Subjt:  ERGFG---DDL---PRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYANIDDHEEFQ------------------------GAKWRLSKTEKRTFQAAYLK

Query:  SEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILDC
          A  W  F++   +PI+H ST+S + +LL +AIL   SI+VGKII  EI +C
Subjt:  SEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILDC

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein5.8e-1441.9Show/hide
Query:  WSQFCAKLEPVNSNIVREFYANIDDHEE----FQGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKII
        W QFC + +     +VREFYAN+ +H +     +GA+W+ S  E  +F+ + +K E   W+ F+  RLL  TH S V++DR +L +AI+   SIDVGK+I
Subjt:  WSQFCAKLEPVNSNIVREFYANIDDHEE----FQGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKII

Query:  SSEIL
        S  IL
Subjt:  SSEIL

A0A2P5AGA5 Uncharacterized protein (Fragment)1.9e-0930.2Show/hide
Query:  RFINNLARAKYVEMLR-RDFLFERGFGDD-------LPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYAN-----------------------------
        +F    A  +Y   ++ R    E+GF  D       LP F+   I    W QFCA  E     +VREFYAN                             
Subjt:  RFINNLARAKYVEMLR-RDFLFERGFGDD-------LPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYAN-----------------------------

Query:  ---IDDHEEF------------------QGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIL
           +D+H EF                   GA+W +S     T   + L   A  W  F+K  LLP TH  TVS+DR+LL  ++L   SI+VG++I SEI 
Subjt:  ---IDDHEEF------------------QGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIL

Query:  DC
         C
Subjt:  DC

A0A2P5BCG4 Uncharacterized protein (Fragment)8.7e-1030.69Show/hide
Query:  RFINNLARAKYVEMLR-RDFLFERGFGDD-------LPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYAN-----------------------------
        +F    A  +Y   ++ R    E+GF  D       LP F+   I    W QFCA  E     +VREFYAN                             
Subjt:  RFINNLARAKYVEMLR-RDFLFERGFGDD-------LPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYAN-----------------------------

Query:  ---IDDHEEF------------------QGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIL
           +D+H EF                   GA+W +S     T   + L   A  W  F+K RLLP TH  TVS+DR+LL  ++L   SI+VG++I SEI 
Subjt:  ---IDDHEEF------------------QGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEIL

Query:  DC
         C
Subjt:  DC

A0A2P5DAQ2 Uncharacterized protein1.9e-0926.87Show/hide
Query:  RFINNLARAKYVEMLR-------RDFLFERGFGDDLPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYAN------------------------------
        +F +  A  +Y E ++       ++F+++     + P F+   I+   W  FCA  E     +VREFY N                              
Subjt:  RFINNLARAKYVEMLR-------RDFLFERGFGDDLPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYAN------------------------------

Query:  --IDDHEEF------------------QGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILD
          ID+H EF                   GA+W +S     T   + L   A  W  F+K RLLP TH  TVS++ V L +++L   SI+VG++I  EI  
Subjt:  --IDDHEEF------------------QGAKWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILD

Query:  C
        C
Subjt:  C

A0A5D2B8V0 Uncharacterized protein1.8e-1032.03Show/hide
Query:  ERGFG---DDL---PRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYANIDDHEEFQ------------------------GAKWRLSKTEKRTFQAAYLK
        E+GFG   +DL   P  +R  I  L W +FC      +  +VREFYA++   +  +                        G++W +      + Q  YLK
Subjt:  ERGFG---DDL---PRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYANIDDHEEFQ------------------------GAKWRLSKTEKRTFQAAYLK

Query:  SEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILDC
          A  W  F++   +PI+H ST+S + +LL +AIL   SI+VGKII  EI +C
Subjt:  SEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAATGAGAGCTAGAAAAGAGAGGGAGAATGAGGACGAAGAGGTACCTGTTACCCCTGAAGTAACGGATAATGAGCCAGTGCAGGAGGCTCAAGTGGAGGTGAT
CATGCCAGAAGTACCAAAACGTCGCCGCGTTAAGAGGAAAGCAGGCCGCGCTAGGGTTGTCCGAACTAATACTCCTTCGCCTCCAACCACTGATTCTGAAAGAGAAAATG
CAAGAAGAGAGGAACGAGAAAAGAAGGAAGCTGAGGACAAGGCGAGAGAAGAAGAAGCAAAGAAAGCGGAAGAAGAGATTTTGCCCAAACAAGCGGAAGACAAGGGCAAA
GGTATTGTTGAGGCATCGGGTGAGGCTGACGAGATTGAGCAATCGAGATTTCTGTACAATCGCTTCATCAATAACCTTGCTCGGGCAAAGTATGTTGAGATGCTGAGAAG
GGACTTCCTATTTGAACGAGGATTTGGTGATGATCTGCCACGGTTCTTGAGGACTGGAATAGTGAACCTCGGCTGGAGTCAATTTTGTGCAAAGCTGGAACCTGTTAATT
CAAACATTGTTCGAGAATTTTACGCCAATATCGACGATCACGAAGAATTTCAGGGGGCCAAGTGGAGATTGTCGAAAACGGAAAAGCGCACATTTCAGGCTGCTTATTTG
AAGAGCGAGGCCAATACATGGATGGGTTTCATCAAGCTGCGCTTACTGCCGATAACTCACGACTCAACGGTGTCTCGAGATCGGGTTTTGCTTGCCTTTGCTATTCTTCG
TTCCATGAGTATTGATGTGGGTAAGATAATTTCTTCTGAGATTCTTGATTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAAATGAGAGCTAGAAAAGAGAGGGAGAATGAGGACGAAGAGGTACCTGTTACCCCTGAAGTAACGGATAATGAGCCAGTGCAGGAGGCTCAAGTGGAGGTGAT
CATGCCAGAAGTACCAAAACGTCGCCGCGTTAAGAGGAAAGCAGGCCGCGCTAGGGTTGTCCGAACTAATACTCCTTCGCCTCCAACCACTGATTCTGAAAGAGAAAATG
CAAGAAGAGAGGAACGAGAAAAGAAGGAAGCTGAGGACAAGGCGAGAGAAGAAGAAGCAAAGAAAGCGGAAGAAGAGATTTTGCCCAAACAAGCGGAAGACAAGGGCAAA
GGTATTGTTGAGGCATCGGGTGAGGCTGACGAGATTGAGCAATCGAGATTTCTGTACAATCGCTTCATCAATAACCTTGCTCGGGCAAAGTATGTTGAGATGCTGAGAAG
GGACTTCCTATTTGAACGAGGATTTGGTGATGATCTGCCACGGTTCTTGAGGACTGGAATAGTGAACCTCGGCTGGAGTCAATTTTGTGCAAAGCTGGAACCTGTTAATT
CAAACATTGTTCGAGAATTTTACGCCAATATCGACGATCACGAAGAATTTCAGGGGGCCAAGTGGAGATTGTCGAAAACGGAAAAGCGCACATTTCAGGCTGCTTATTTG
AAGAGCGAGGCCAATACATGGATGGGTTTCATCAAGCTGCGCTTACTGCCGATAACTCACGACTCAACGGTGTCTCGAGATCGGGTTTTGCTTGCCTTTGCTATTCTTCG
TTCCATGAGTATTGATGTGGGTAAGATAATTTCTTCTGAGATTCTTGATTGCTAG
Protein sequenceShow/hide protein sequence
MAKMRARKERENEDEEVPVTPEVTDNEPVQEAQVEVIMPEVPKRRRVKRKAGRARVVRTNTPSPPTTDSERENARREEREKKEAEDKAREEEAKKAEEEILPKQAEDKGK
GIVEASGEADEIEQSRFLYNRFINNLARAKYVEMLRRDFLFERGFGDDLPRFLRTGIVNLGWSQFCAKLEPVNSNIVREFYANIDDHEEFQGAKWRLSKTEKRTFQAAYL
KSEANTWMGFIKLRLLPITHDSTVSRDRVLLAFAILRSMSIDVGKIISSEILDC