; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034286 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034286
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold10:21162998..21169133
RNA-Seq ExpressionSpg034286
SyntenySpg034286
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025357.1 hypothetical protein E6C27_scaffold1204G00410 [Cucumis melo var. makuwa]2.1e-1563.29Show/hide
Query:  ILFGFSYTEGIKRPRGSRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWLELYIESV
        +LFG SY EG KRP+G+R SLQTGELDKT                 VEIELPVPDTLPTSAES RS+S+TWLELY ES+
Subjt:  ILFGFSYTEGIKRPRGSRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWLELYIESV

KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.5e-1677.42Show/hide
Query:  ILFGFSYTEGIKRPRGSRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESV
        +LF  SY EG KRPRG+R SLQTG+LDKTVEIELP+PDTLPT AES  S+SSTWLELY ESV
Subjt:  ILFGFSYTEGIKRPRGSRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESV

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.3e-1459.55Show/hide
Query:  GSEINLSTSGILFGFSYTEGIKRPRGSRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWLELYIESV
        G+ +NL    +LFG  Y EG KRPRG+R+SLQTGELDKT                 VEIELPVPDTLPTSAESS S+SSTWLEL  E V
Subjt:  GSEINLSTSGILFGFSYTEGIKRPRGSRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWLELYIESV

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]1.5e-1654.37Show/hide
Query:  KAHAKPAIAGSEINLSTSGILFGFSYTEGIK----------------------RPRGSRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYI
        K +AKPAIA S  N     +LFG SY E ++                       PRG+R +L TG+LDKTVEIELPVPDTLPTSAESS+S+SSTWLELY 
Subjt:  KAHAKPAIAGSEINLSTSGILFGFSYTEGIK----------------------RPRGSRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYI

Query:  ESV
        ESV
Subjt:  ESV

KAA0062263.1 hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa]9.8e-1371.93Show/hide
Query:  SYTEGIKRPRGSRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESV
        S  E ++ PRG+R SLQ G+L+KTVEIELP+PDTLPTS+ESS+S+SSTWLELY ESV
Subjt:  SYTEGIKRPRGSRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESV

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein7.1e-1777.42Show/hide
Query:  ILFGFSYTEGIKRPRGSRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESV
        +LF  SY EG KRPRG+R SLQTG+LDKTVEIELP+PDTLPT AES  S+SSTWLELY ESV
Subjt:  ILFGFSYTEGIKRPRGSRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESV

A0A5A7U9X4 DNA/RNA polymerases superfamily protein1.1e-1459.55Show/hide
Query:  GSEINLSTSGILFGFSYTEGIKRPRGSRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWLELYIESV
        G+ +NL    +LFG  Y EG KRPRG+R+SLQTGELDKT                 VEIELPVPDTLPTSAESS S+SSTWLEL  E V
Subjt:  GSEINLSTSGILFGFSYTEGIKRPRGSRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWLELYIESV

A0A5A7UAH6 CCHC-type domain-containing protein7.1e-1754.37Show/hide
Query:  KAHAKPAIAGSEINLSTSGILFGFSYTEGIK----------------------RPRGSRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYI
        K +AKPAIA S  N     +LFG SY E ++                       PRG+R +L TG+LDKTVEIELPVPDTLPTSAESS+S+SSTWLELY 
Subjt:  KAHAKPAIAGSEINLSTSGILFGFSYTEGIK----------------------RPRGSRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYI

Query:  ESV
        ESV
Subjt:  ESV

A0A5A7V2F2 Uncharacterized protein4.7e-1371.93Show/hide
Query:  SYTEGIKRPRGSRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESV
        S  E ++ PRG+R SLQ G+L+KTVEIELP+PDTLPTS+ESS+S+SSTWLELY ESV
Subjt:  SYTEGIKRPRGSRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESV

A0A5D3DIM8 Uncharacterized protein1.0e-1563.29Show/hide
Query:  ILFGFSYTEGIKRPRGSRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWLELYIESV
        +LFG SY EG KRP+G+R SLQTGELDKT                 VEIELPVPDTLPTSAES RS+S+TWLELY ES+
Subjt:  ILFGFSYTEGIKRPRGSRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWLELYIESV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTCCAGCAGTAGTTTTTTTTTCTTCTTCTATTCCAGAATTTTTGTCCGGTTCAGCTGCTGCTTTTTGGTCCGGTTCGGTCTTTTGCAGCCTCATTTCACTCAT
TGCATGGCCGGTTCATTGCTTGGATGAGCGGTTCGGGATGGTTCATGAAGCTCGGGCGTGCTGCAAGCACCCTGGGAGCGTCCCCCTACGGATGGTGTTTGCATGGGTTA
ATATCAAGGTGAATGGGGAAAGTGTTCATAGTAAGTGGGAGAAGGAAACGTGTCAAACGTATCCTGCGGTCTCCATCATTAGGTTGCACCGTGAGATTCCTATGCGCTGC
CTGCGAGTCGCCCTAGGAGTGATCACCCTACGGTGGGCTTGCGCATGGGATTCGGAACAACGCAAACTCCAGAAATGGATAGGATTTCCTAGGGCCATTCCCAACATTAG
CTCTTCCCTACGGTGGCATTGTTGGGGCCGCCCTCTGCGATCTGAAAATGATGGGCAACACTTACAAGATGGTCTTCACCAAATTAACGGAAAAGCTCATGCAAAGCCAG
CCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGGAATTTTATTCGGTTTCAGCTACACAGAAGGAATCAAGAGGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGG
GAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTC
CGTTCTTATTGTAAATGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATTCCAGCAGTAGTTTTTTTTTCTTCTTCTATTCCAGAATTTTTGTCCGGTTCAGCTGCTGCTTTTTGGTCCGGTTCGGTCTTTTGCAGCCTCATTTCACTCAT
TGCATGGCCGGTTCATTGCTTGGATGAGCGGTTCGGGATGGTTCATGAAGCTCGGGCGTGCTGCAAGCACCCTGGGAGCGTCCCCCTACGGATGGTGTTTGCATGGGTTA
ATATCAAGGTGAATGGGGAAAGTGTTCATAGTAAGTGGGAGAAGGAAACGTGTCAAACGTATCCTGCGGTCTCCATCATTAGGTTGCACCGTGAGATTCCTATGCGCTGC
CTGCGAGTCGCCCTAGGAGTGATCACCCTACGGTGGGCTTGCGCATGGGATTCGGAACAACGCAAACTCCAGAAATGGATAGGATTTCCTAGGGCCATTCCCAACATTAG
CTCTTCCCTACGGTGGCATTGTTGGGGCCGCCCTCTGCGATCTGAAAATGATGGGCAACACTTACAAGATGGTCTTCACCAAATTAACGGAAAAGCTCATGCAAAGCCAG
CCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGGAATTTTATTCGGTTTCAGCTACACAGAAGGAATCAAGAGGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGG
GAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTC
CGTTCTTATTGTAAATGTTTTGTAA
Protein sequenceShow/hide protein sequence
MKIPAVVFFSSSIPEFLSGSAAAFWSGSVFCSLISLIAWPVHCLDERFGMVHEARACCKHPGSVPLRMVFAWVNIKVNGESVHSKWEKETCQTYPAVSIIRLHREIPMRC
LRVALGVITLRWACAWDSEQRKLQKWIGFPRAIPNISSSLRWHCWGRPLRSENDGQHLQDGLHQINGKAHAKPAIAGSEINLSTSGILFGFSYTEGIKRPRGSRSSLQTG
ELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVLIVNVL