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Spg034298 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034298
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationscaffold2:49970120..49974166
RNA-Seq ExpressionSpg034298
SyntenySpg034298
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131652.1 protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia]1.1e-2351.89Show/hide
Query:  MRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRT
        +RY+QMTTNIAES N+L + AR+L IT LLDHIRG L+  +Y+HR  A+   + +S Y EE++  A   ARRH+V  ID++ F+V DG+L G +++ ++T
Subjt:  MRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRT

Query:  CTCREF
        CTCREF
Subjt:  CTCREF

XP_022145820.1 uncharacterized protein LOC111015181 [Momordica charantia]3.1e-2150Show/hide
Query:  MRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRT
        +RY QMTTNIAES N+L + AR+LP+T LLDHIRG L+  +YD R  AA     +S Y E +        RRHVV  ID++ FQV D +L G ++++  T
Subjt:  MRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRT

Query:  CTCREF
        C CREF
Subjt:  CTCREF

XP_022147768.1 uncharacterized protein LOC111016623 [Momordica charantia]1.4e-2147.17Show/hide
Query:  MRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRT
        +RYNQMTTNIAES N++L  AR LP+T LL++ R  L+  +Y+ R  AA   + +++Y E+I+  + + ARRH +RPID YEF+V DG    R+N++++T
Subjt:  MRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRT

Query:  CTCREF
        C+C++F
Subjt:  CTCREF

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]1.8e-2147.66Show/hide
Query:  GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTR
        GMRYNQMT+N+AES N++L  AR+LPIT L ++ R  L+  +YD R   +     +++Y E I+    + AR H VRPIDR+EF+V DG    R+NI+++
Subjt:  GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTR

Query:  TCTCREF
        TCTC++F
Subjt:  TCTCREF

XP_022154924.1 uncharacterized protein LOC111022069 [Momordica charantia]3.6e-2248.6Show/hide
Query:  GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTR
        G+RYNQMTTNIA+S N++L  AR LPIT LL+H R  L+ ++Y+ R  A+   + ++ Y EEIV  A +  RRH +RPID YE++V DG    R+N++++
Subjt:  GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTR

Query:  TCTCREF
        +CTC++F
Subjt:  TCTCREF

TrEMBL top hitse value%identityAlignment
A0A6J1BRM2 protein FAR1-RELATED SEQUENCE 4-like5.5e-2451.89Show/hide
Query:  MRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRT
        +RY+QMTTNIAES N+L + AR+L IT LLDHIRG L+  +Y+HR  A+   + +S Y EE++  A   ARRH+V  ID++ F+V DG+L G +++ ++T
Subjt:  MRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRT

Query:  CTCREF
        CTCREF
Subjt:  CTCREF

A0A6J1CVL4 uncharacterized protein LOC1110151811.5e-2150Show/hide
Query:  MRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRT
        +RY QMTTNIAES N+L + AR+LP+T LLDHIRG L+  +YD R  AA     +S Y E +        RRHVV  ID++ FQV D +L G ++++  T
Subjt:  MRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRT

Query:  CTCREF
        C CREF
Subjt:  CTCREF

A0A6J1D278 uncharacterized protein LOC1110166236.7e-2247.17Show/hide
Query:  MRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRT
        +RYNQMTTNIAES N++L  AR LP+T LL++ R  L+  +Y+ R  AA   + +++Y E+I+  + + ARRH +RPID YEF+V DG    R+N++++T
Subjt:  MRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRT

Query:  CTCREF
        C+C++F
Subjt:  CTCREF

A0A6J1DLB0 uncharacterized protein LOC1110219698.8e-2247.66Show/hide
Query:  GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTR
        GMRYNQMT+N+AES N++L  AR+LPIT L ++ R  L+  +YD R   +     +++Y E I+    + AR H VRPIDR+EF+V DG    R+NI+++
Subjt:  GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTR

Query:  TCTCREF
        TCTC++F
Subjt:  TCTCREF

A0A6J1DNQ2 uncharacterized protein LOC1110220691.8e-2248.6Show/hide
Query:  GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTR
        G+RYNQMTTNIA+S N++L  AR LPIT LL+H R  L+ ++Y+ R  A+   + ++ Y EEIV  A +  RRH +RPID YE++V DG    R+N++++
Subjt:  GMRYNQMTTNIAESFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTR

Query:  TCTCREF
        +CTC++F
Subjt:  TCTCREF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTTCCACTACGCCGGGGTTTTCATCCCCTTCACAAACGATGTGATCGTGAATCGTTCATGTGGAGACATGCGAGTGGGGGCGTCCTATGCAATGAGAATATCCTT
TGATTTTCATGGGGATCTCGCCCCTCTCATTGGCCTGAGAGGGACTCGATTTGGTGGTTGGACTATAAACCAATTGTTCATTAGAGGATCAATGGGACTTAAGGAACAAG
AGATAACTTCAAGGTCTTATCCAAAAGCTCAACAAGTTCAAGGGAAGCCAATTTACAACTTTGATGTCTTAAGAGAACTTTTTGAGAAAGACAGAGCAACTGGAGTATTT
GCAGAGAGTGCAAAAGAGAAGCACAAAAGGAAGAAGTCAGTTGCAGTTGACCTGATTGGAGAAAAATTAGATATGCTTAACAAATTCTATGGAGAGAATGATTTCCATGA
CTGGGGAGAGTATGAAGACGATGTTAACCCAGACAGTGATTTTCAGGATTGGGGAGAATACGAAGAAGAGGAGCCGGACACATATACAGATGGAGCACATGAGAGTGGGG
AGGAAGATTTGTACGAAGTTGATGTAACTGCCCAGGAGATAGAGGAGAACATCGGGGTTCATCAGGAGTGTGGAATGAGATACAATCAAATGACCACGAACATTGCGGAA
TCTTTTAACTCCCTCTTGAAAGATGCGAGAGAGTTACCAATAACGGGTCTTCTTGATCACATTAGGGGATGGTTGAAAGCCACTTACTACGACCATCGTCCCGGTGCAGC
AAAATGGGATGCACCAATATCAAAATATGGTGAAGAAATTGTTCTAGCAGCGGAGAAGTATGCGAGAAGGCATGTGGTTAGGCCAATTGACCGGTACGAATTCCAAGTCG
ACGATGGACACTTGGGTGGTCGTATCAACATCCACACGAGGACGTGTACTTGTCGTGAATTCGTCTGCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGCTTCCACTACGCCGGGGTTTTCATCCCCTTCACAAACGATGTGATCGTGAATCGTTCATGTGGAGACATGCGAGTGGGGGCGTCCTATGCAATGAGAATATCCTT
TGATTTTCATGGGGATCTCGCCCCTCTCATTGGCCTGAGAGGGACTCGATTTGGTGGTTGGACTATAAACCAATTGTTCATTAGAGGATCAATGGGACTTAAGGAACAAG
AGATAACTTCAAGGTCTTATCCAAAAGCTCAACAAGTTCAAGGGAAGCCAATTTACAACTTTGATGTCTTAAGAGAACTTTTTGAGAAAGACAGAGCAACTGGAGTATTT
GCAGAGAGTGCAAAAGAGAAGCACAAAAGGAAGAAGTCAGTTGCAGTTGACCTGATTGGAGAAAAATTAGATATGCTTAACAAATTCTATGGAGAGAATGATTTCCATGA
CTGGGGAGAGTATGAAGACGATGTTAACCCAGACAGTGATTTTCAGGATTGGGGAGAATACGAAGAAGAGGAGCCGGACACATATACAGATGGAGCACATGAGAGTGGGG
AGGAAGATTTGTACGAAGTTGATGTAACTGCCCAGGAGATAGAGGAGAACATCGGGGTTCATCAGGAGTGTGGAATGAGATACAATCAAATGACCACGAACATTGCGGAA
TCTTTTAACTCCCTCTTGAAAGATGCGAGAGAGTTACCAATAACGGGTCTTCTTGATCACATTAGGGGATGGTTGAAAGCCACTTACTACGACCATCGTCCCGGTGCAGC
AAAATGGGATGCACCAATATCAAAATATGGTGAAGAAATTGTTCTAGCAGCGGAGAAGTATGCGAGAAGGCATGTGGTTAGGCCAATTGACCGGTACGAATTCCAAGTCG
ACGATGGACACTTGGGTGGTCGTATCAACATCCACACGAGGACGTGTACTTGTCGTGAATTCGTCTGCCTCTAA
Protein sequenceShow/hide protein sequence
MRFHYAGVFIPFTNDVIVNRSCGDMRVGASYAMRISFDFHGDLAPLIGLRGTRFGGWTINQLFIRGSMGLKEQEITSRSYPKAQQVQGKPIYNFDVLRELFEKDRATGVF
AESAKEKHKRKKSVAVDLIGEKLDMLNKFYGENDFHDWGEYEDDVNPDSDFQDWGEYEEEEPDTYTDGAHESGEEDLYEVDVTAQEIEENIGVHQECGMRYNQMTTNIAE
SFNSLLKDARELPITGLLDHIRGWLKATYYDHRPGAAKWDAPISKYGEEIVLAAEKYARRHVVRPIDRYEFQVDDGHLGGRINIHTRTCTCREFVCL