; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034318 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034318
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationscaffold12:21567363..21576264
RNA-Seq ExpressionSpg034318
SyntenySpg034318
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]8.5e-1451.92Show/hide
Query:  PQQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS-----EPTVKKSKVMQPCN--SLKL
        P QN+ S+LE MMKEYMARTDA IQS   SMR    Q+G LANELK RP G+ P +TE PRR+GK+Q +A+TLRS      PT+  + V  P    ++K+
Subjt:  PQQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS-----EPTVKKSKVMQPCN--SLKL

Query:  LQQP
         + P
Subjt:  LQQP

XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]1.2e-1553.85Show/hide
Query:  PQQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS-----EPTVKKSKVMQPCN--SLKL
        P QN+ S+LE MMKEYMARTDA IQS   SMR  E Q+GQLANELK RP G+ P +TE P+R+GK+Q +A+TLRS     EPT+  + V  P    ++K+
Subjt:  PQQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS-----EPTVKKSKVMQPCN--SLKL

Query:  LQQP
         + P
Subjt:  LQQP

XP_030477908.1 uncharacterized protein LOC115694945 [Cannabis sativa]6.5e-1443.85Show/hide
Query:  QQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRSEPTVKKSKVMQPCNSLKLLQQPEIRK
        Q    SSLE++M++YMA+ DA IQS   S+R LELQ+G LANELKARP G++PS+TE+PRR GK+Q ++I LRS    K  K+       +  QQ    K
Subjt:  QQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRSEPTVKKSKVMQPCNSLKLLQQPEIRK

Query:  SFFDEQLYTVAHIKVVKTPWYDDFFNYLDF
         F D  +    HI +      +   NY+ F
Subjt:  SFFDEQLYTVAHIKVVKTPWYDDFFNYLDF

XP_030494874.1 uncharacterized protein LOC115710657 [Cannabis sativa]2.9e-1458.54Show/hide
Query:  QQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRSEPTVKKSK
        Q +  SSLE++M++YMA+ DA IQS   S+R LELQ+G LANELKARP G++PS+TE+PRR GK+Q  AI LRS   +K S+
Subjt:  QQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRSEPTVKKSK

XP_030507648.1 uncharacterized protein LOC115722545 [Cannabis sativa]1.3e-1452.08Show/hide
Query:  EPDAPLPQQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRSEPTVKKSKVMQPCNS
        +P +  PQ +  SSLE++M++YMA+ DA IQS   S+R LE+Q+GQLAN+LK RP G +PS+TE+PRR GK+  +AITLRS   ++ + V   CNS
Subjt:  EPDAPLPQQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRSEPTVKKSKVMQPCNS

TrEMBL top hitse value%identityAlignment
A0A6J1DW02 uncharacterized protein LOC1110248974.1e-1451.92Show/hide
Query:  PQQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS-----EPTVKKSKVMQPCN--SLKL
        P QN+ S+LE MMKEYMARTDA IQS   SMR    Q+G LANELK RP G+ P +TE PRR+GK+Q +A+TLRS      PT+  + V  P    ++K+
Subjt:  PQQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS-----EPTVKKSKVMQPCN--SLKL

Query:  LQQP
         + P
Subjt:  LQQP

A0A6J1DWK1 uncharacterized protein LOC1110250537.2e-1157.53Show/hide
Query:  QNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS
        + S +SLE +MK+YMA  DA +QS   S+R LELQVGQLA +LK+RP G +PS+TE P+R  K+Q  A+TLRS
Subjt:  QNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS

A0A6J1DYG0 uncharacterized protein LOC1110257645.7e-1653.85Show/hide
Query:  PQQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS-----EPTVKKSKVMQPCN--SLKL
        P QN+ S+LE MMKEYMARTDA IQS   SMR  E Q+GQLANELK RP G+ P +TE P+R+GK+Q +A+TLRS     EPT+  + V  P    ++K+
Subjt:  PQQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS-----EPTVKKSKVMQPCN--SLKL

Query:  LQQP
         + P
Subjt:  LQQP

A0A6J1GJ68 uncharacterized protein LOC1114543442.5e-1155.41Show/hide
Query:  QQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS
        Q  S +S+E+++KEYMA+ D  IQS   S++ LE+QVGQLA EL+ RP G +P++TE P+R+GK+Q QAI LRS
Subjt:  QQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS

A0A6J1H7K8 uncharacterized protein LOC1114611673.8e-1251.65Show/hide
Query:  QQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS--EPTVKKSKVMQPCNS
        Q   E+SLE+++KEYMA+ D  IQS   S+R LE+QVGQLANEL+ RP G +PS+TE P+R+G +Q QAI LRS  E + ++ K+ +  +S
Subjt:  QQNSESSLEAMMKEYMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRS--EPTVKKSKVMQPCNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATTCTCTTCACGAACTCGACATGGACGACCACCGAGATCTTCCCCGCTATTTTCCGGCCTTAGAACGGGCTTGTGGGAACCCGAGCATGATGAATTTGAAGAA
GGGAGATATGGGTTTTAAGCTTGAGTGCCATGGTTTTAAGCTTGTGGGAACGGGCTTGTGGCAGGATGCCCCCACTCGCATGGCCGATATTGCAGCATCAGCTAACGCAC
TTAAAAACATAACTGTGGTAAGTAATGTTCAGCAGTCGCCAGTGGTGGAGCCTGATGCACCTTTGCCCCAGCAAAATTCAGAGAGTTCTCTTGAGGCAATGATGAAAGAA
TATATGGCTCGTACTGATGCCGCAATTCAAAGTAATACAACTTCAATGAGAGCTCTGGAATTGCAAGTGGGTCAGCTAGCTAATGAGCTAAAGGCACGACCTCACGGGAA
CATTCCTTCGAATACTGAACACCCTAGAAGGAAAGGTAAGAAGCAGGTGCAGGCAATAACTCTAAGGAGCGAGCCAACTGTTAAGAAATCCAAAGTTATGCAACCTTGTA
ATTCGTTGAAATTGCTCCAGCAACCTGAGATTAGAAAATCCTTCTTTGATGAGCAGTTATATACTGTAGCTCATATTAAGGTAGTCAAAACACCTTGGTATGATGACTTT
TTCAATTACCTTGATTTTGGAAATTTGCCTCCTGGTTTATCAAAAGAACAGATGAAAGAATTTTTCCATGGGGTAAAGTTTTATTTATCAAATGATGCATCTATGGTTAG
ACAATGTGTTGATGATGGCTGTGAGTTTAAAAAAGGGCAGCGAATAAAGCATTACTGGAGGGAGGTGTTTCGTTCGAAATATCTCTCTCTGAAGTTGCTGGCAGATTATG
GGAGCGCAGTTAGTGCCCTATTTATACGAGCTCCCATCAGGTTCAGAGTCCCAAAGAGTTCCAATGATATAAACTTGTTTGATAAGGGGATTATTGCCACTGCCAACCTG
GCTAGGCTTAAAATAGGTGAGGCATGCGAAGGTGGTTTGTTGTGTGGTGTCCATAGAGTGCTGGAGCAACTTGAGATGGTGCTCAGTAGCCTAGAATTCACTAAGAGACA
ACTTCAAACCTACTGGAGCTATGCTCGTAGAAGGGACATCGCACTAAGGAGGGCTATGCAAGCAAATTTTTCTAAGCCATATCAAGCCTTCCTAATGTTCATTGATGATT
TTATGAACCTATGCATTCCACCCTTGCCCATCTTTCGAGAGGAAGAAGAAAACCCAGAGTCTGGACATACAAAAGAATTAAAGGGAAAAACCTTTTGCTTGAGCATTCCT
TCTAGCCTAGTCATGACTGCAGCAAAAGTTCTGAGATATCATGGCCTCGGGTATAAATGGTCGAAGGCTGATATTGTTTTGAGGGAAAGTAAAGTGATTAGCAGTGCCTC
GGGTATAAATGGTCGGGGGCTGATATGCCACTATTGGATGTCGAGGCCTCGGGGTCGAACGCCGAGCTCTGTAGAGAAGTGTCGAGGCCTTGGGTATAAATGGTCAAGGG
TCGGTGCAACTCGAAGGGTAGGGGCTACTTACCAGTACCTTAGTGTACTGACCCCCTCCCCTCTCTCCCCCCAACTACCAGATTTTGCAGGTTATGTGGACTGCGTGTAC
CATGGTGATGCAGAGGAGGCATATGAGGAAGGACCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGATTCTCTTCACGAACTCGACATGGACGACCACCGAGATCTTCCCCGCTATTTTCCGGCCTTAGAACGGGCTTGTGGGAACCCGAGCATGATGAATTTGAAGAA
GGGAGATATGGGTTTTAAGCTTGAGTGCCATGGTTTTAAGCTTGTGGGAACGGGCTTGTGGCAGGATGCCCCCACTCGCATGGCCGATATTGCAGCATCAGCTAACGCAC
TTAAAAACATAACTGTGGTAAGTAATGTTCAGCAGTCGCCAGTGGTGGAGCCTGATGCACCTTTGCCCCAGCAAAATTCAGAGAGTTCTCTTGAGGCAATGATGAAAGAA
TATATGGCTCGTACTGATGCCGCAATTCAAAGTAATACAACTTCAATGAGAGCTCTGGAATTGCAAGTGGGTCAGCTAGCTAATGAGCTAAAGGCACGACCTCACGGGAA
CATTCCTTCGAATACTGAACACCCTAGAAGGAAAGGTAAGAAGCAGGTGCAGGCAATAACTCTAAGGAGCGAGCCAACTGTTAAGAAATCCAAAGTTATGCAACCTTGTA
ATTCGTTGAAATTGCTCCAGCAACCTGAGATTAGAAAATCCTTCTTTGATGAGCAGTTATATACTGTAGCTCATATTAAGGTAGTCAAAACACCTTGGTATGATGACTTT
TTCAATTACCTTGATTTTGGAAATTTGCCTCCTGGTTTATCAAAAGAACAGATGAAAGAATTTTTCCATGGGGTAAAGTTTTATTTATCAAATGATGCATCTATGGTTAG
ACAATGTGTTGATGATGGCTGTGAGTTTAAAAAAGGGCAGCGAATAAAGCATTACTGGAGGGAGGTGTTTCGTTCGAAATATCTCTCTCTGAAGTTGCTGGCAGATTATG
GGAGCGCAGTTAGTGCCCTATTTATACGAGCTCCCATCAGGTTCAGAGTCCCAAAGAGTTCCAATGATATAAACTTGTTTGATAAGGGGATTATTGCCACTGCCAACCTG
GCTAGGCTTAAAATAGGTGAGGCATGCGAAGGTGGTTTGTTGTGTGGTGTCCATAGAGTGCTGGAGCAACTTGAGATGGTGCTCAGTAGCCTAGAATTCACTAAGAGACA
ACTTCAAACCTACTGGAGCTATGCTCGTAGAAGGGACATCGCACTAAGGAGGGCTATGCAAGCAAATTTTTCTAAGCCATATCAAGCCTTCCTAATGTTCATTGATGATT
TTATGAACCTATGCATTCCACCCTTGCCCATCTTTCGAGAGGAAGAAGAAAACCCAGAGTCTGGACATACAAAAGAATTAAAGGGAAAAACCTTTTGCTTGAGCATTCCT
TCTAGCCTAGTCATGACTGCAGCAAAAGTTCTGAGATATCATGGCCTCGGGTATAAATGGTCGAAGGCTGATATTGTTTTGAGGGAAAGTAAAGTGATTAGCAGTGCCTC
GGGTATAAATGGTCGGGGGCTGATATGCCACTATTGGATGTCGAGGCCTCGGGGTCGAACGCCGAGCTCTGTAGAGAAGTGTCGAGGCCTTGGGTATAAATGGTCAAGGG
TCGGTGCAACTCGAAGGGTAGGGGCTACTTACCAGTACCTTAGTGTACTGACCCCCTCCCCTCTCTCCCCCCAACTACCAGATTTTGCAGGTTATGTGGACTGCGTGTAC
CATGGTGATGCAGAGGAGGCATATGAGGAAGGACCGTAG
Protein sequenceShow/hide protein sequence
MDDSLHELDMDDHRDLPRYFPALERACGNPSMMNLKKGDMGFKLECHGFKLVGTGLWQDAPTRMADIAASANALKNITVVSNVQQSPVVEPDAPLPQQNSESSLEAMMKE
YMARTDAAIQSNTTSMRALELQVGQLANELKARPHGNIPSNTEHPRRKGKKQVQAITLRSEPTVKKSKVMQPCNSLKLLQQPEIRKSFFDEQLYTVAHIKVVKTPWYDDF
FNYLDFGNLPPGLSKEQMKEFFHGVKFYLSNDASMVRQCVDDGCEFKKGQRIKHYWREVFRSKYLSLKLLADYGSAVSALFIRAPIRFRVPKSSNDINLFDKGIIATANL
ARLKIGEACEGGLLCGVHRVLEQLEMVLSSLEFTKRQLQTYWSYARRRDIALRRAMQANFSKPYQAFLMFIDDFMNLCIPPLPIFREEEENPESGHTKELKGKTFCLSIP
SSLVMTAAKVLRYHGLGYKWSKADIVLRESKVISSASGINGRGLICHYWMSRPRGRTPSSVEKCRGLGYKWSRVGATRRVGATYQYLSVLTPSPLSPQLPDFAGYVDCVY
HGDAEEAYEEGP