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Spg034341 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034341
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold12:21711614..21716851
RNA-Seq ExpressionSpg034341
SyntenySpg034341
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.4e-1132.8Show/hide
Query:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRD--FPHARFNEMV-----------VAPSNDQLNAAVR-------------------------
        +VREFYAN+ D       VR V V WS  AIN++F L D    H+ F E +           VA +  + N + +                         
Subjt:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRD--FPHARFNEMV-----------VAPSNDQLNAAVR-------------------------

Query:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDTPNLARL
              + VS+DR+LL+ ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P  + E+ LH + G ID   +AR+
Subjt:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDTPNLARL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.6e-2331.1Show/hide
Query:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRD--FPHARFNEMV-----------VAPSNDQLNAAVR-------------------------
        +VREFYAN+ D E     VR V V WS  AIN++F L D    H+ F + +           VA +  + N + +                         
Subjt:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRD--FPHARFNEMV-----------VAPSNDQLNAAVR-------------------------

Query:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDT-----------------PNL
              + VS+DR+LL+ ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P  + E+ LH + G ID                  P+ 
Subjt:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDT-----------------PNL

Query:  ARLQCTHEARQGGLVCDIHKILEQLVLLASRQEY--------AERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL
        +R       R  G +    K LEQ +     Q+Y          +Q Q FW Y+K RD  L++ALQ+NF++P   FP FP ++
Subjt:  ARLQCTHEARQGGLVCDIHKILEQLVLLASRQEY--------AERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]8.7e-0929.03Show/hide
Query:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRDF--PHARFNEMVVAPS--------------------------NDQLNAAVR----------
        +VREFY N+ + +     VR V V  S  AIN+++ L D    H+ F E +  P                              LN   +          
Subjt:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRDF--PHARFNEMVVAPS--------------------------NDQLNAAVR----------

Query:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDTPNLARL
              ++VS++RVLL++++L   SI++G++I  EI  C  +K G LFFP+ I  +C  A  P  + E+ LH + G ID   +AR+
Subjt:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDTPNLARL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]2.7e-1835.59Show/hide
Query:  EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDT-----------------PNLARLQCT
        + VS+DR+LL++++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P  + E+ LH+  G ID                  P+ +R    
Subjt:  EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDT-----------------PNLARLQCT

Query:  HEARQGGLVCDIHKILEQLVLLASRQEY--------AERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL
          +R  G +    K LEQ +     Q+Y          +Q Q FW Y+K RD  L++ALQ+NF++P   FP FP +L
Subjt:  HEARQGGLVCDIHKILEQLVLLASRQEY--------AERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.3e-2532.85Show/hide
Query:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRD--FPHARFNEMVVAPS--------------------------NDQLNAAVR----------
        +VREFYAN+ D E     VR V V WS  AIN++F L D    H+ F E +  P                              L  A +          
Subjt:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRD--FPHARFNEMVVAPS--------------------------NDQLNAAVR----------

Query:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVPTIPEDGLHLDKGIIDT-----------------PNLA
              ++VS+DR+LL+ ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A    + E+ LH + G ID                  P+ +
Subjt:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVPTIPEDGLHLDKGIIDT-----------------PNLA

Query:  RLQCTHEARQGGLVCDIHKILEQLVLLASRQEYAERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL
        R      +R  G V    K LEQ +   S+QE+  +Q Q FW Y+K RD  L++ALQ+NF++P   FP FP ++
Subjt:  RLQCTHEARQGGLVCDIHKILEQLVLLASRQEYAERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.2e-1132.8Show/hide
Query:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRD--FPHARFNEMV-----------VAPSNDQLNAAVR-------------------------
        +VREFYAN+ D       VR V V WS  AIN++F L D    H+ F E +           VA +  + N + +                         
Subjt:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRD--FPHARFNEMV-----------VAPSNDQLNAAVR-------------------------

Query:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDTPNLARL
              + VS+DR+LL+ ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P  + E+ LH + G ID   +AR+
Subjt:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDTPNLARL

A0A2P5B0E3 Uncharacterized protein9.4e-0931.1Show/hide
Query:  ILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDT-----------------PNLARLQCTHEARQGGLVCDIH
        +L   SI+VG+II  EI     +  G LFFP+ IT +C  A  P  + E+ LH + G ID                  P+ +R      +          
Subjt:  ILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDT-----------------PNLARLQCTHEARQGGLVCDIH

Query:  KILEQLVLLASRQEY--------AERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL
        K LEQ +     Q+Y          +Q Q FW YAK RD   +++LQ NF+KP  +FP F +++
Subjt:  KILEQLVLLASRQEY--------AERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL

A0A2P5BCG4 Uncharacterized protein (Fragment)1.8e-2331.1Show/hide
Query:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRD--FPHARFNEMV-----------VAPSNDQLNAAVR-------------------------
        +VREFYAN+ D E     VR V V WS  AIN++F L D    H+ F + +           VA +  + N + +                         
Subjt:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRD--FPHARFNEMV-----------VAPSNDQLNAAVR-------------------------

Query:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDT-----------------PNL
              + VS+DR+LL+ ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P  + E+ LH + G ID                  P+ 
Subjt:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDT-----------------PNL

Query:  ARLQCTHEARQGGLVCDIHKILEQLVLLASRQEY--------AERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL
        +R       R  G +    K LEQ +     Q+Y          +Q Q FW Y+K RD  L++ALQ+NF++P   FP FP ++
Subjt:  ARLQCTHEARQGGLVCDIHKILEQLVLLASRQEY--------AERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL

A0A2P5CEY2 Uncharacterized protein1.3e-1835.59Show/hide
Query:  EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDT-----------------PNLARLQCT
        + VS+DR+LL++++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P  + E+ LH+  G ID                  P+ +R    
Subjt:  EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVP-TIPEDGLHLDKGIIDT-----------------PNLARLQCT

Query:  HEARQGGLVCDIHKILEQLVLLASRQEY--------AERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL
          +R  G +    K LEQ +     Q+Y          +Q Q FW Y+K RD  L++ALQ+NF++P   FP FP +L
Subjt:  HEARQGGLVCDIHKILEQLVLLASRQEY--------AERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL

A0A2P5DXM3 Uncharacterized protein6.5e-2632.85Show/hide
Query:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRD--FPHARFNEMVVAPS--------------------------NDQLNAAVR----------
        +VREFYAN+ D E     VR V V WS  AIN++F L D    H+ F E +  P                              L  A +          
Subjt:  IVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRD--FPHARFNEMVVAPS--------------------------NDQLNAAVR----------

Query:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVPTIPEDGLHLDKGIIDT-----------------PNLA
              ++VS+DR+LL+ ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A    + E+ LH + G ID                  P+ +
Subjt:  ------EVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVPTIPEDGLHLDKGIIDT-----------------PNLA

Query:  RLQCTHEARQGGLVCDIHKILEQLVLLASRQEYAERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL
        R      +R  G V    K LEQ +   S+QE+  +Q Q FW Y+K RD  L++ALQ+NF++P   FP FP ++
Subjt:  RLQCTHEARQGGLVCDIHKILEQLVLLASRQEYAERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCAAGGCCAAGCGTCCCGACGCTTTTGCGTCTGGAGCCAAAAATTGGGTAGATCGGCGACTGAAGATCTTGATCGTTTCGCCTAATTCTCTTGCGTTGTTCACCAA
AACCAGCAGCAAGAACCTCTCTTTATTGCTGCAAAATGCCCTCGAACACAACCAAGTAAATTGCACCGGTATTCTCCTTGGGATTCTTGATGAGGATGCTTGTGGGAGCA
AGATTTCTAAGGTTTTAAAGTGCTGGAGCCCTATTTATTCAAAACCCCTGGTACGTTTTGCTTCACTTCATCTTCTTGCCCTCGTTCTTTGCTTTATATTTCTCTCTACC
TTGCTTTCGATTACTGTGAGATACTTTGCATCTGAAATGGCTAAAACAAGAGGCCGTAAAGAAAAAGATGCTGAGGAAGAGGAAGTGTCGATTACCCCTGAGGCACCAAA
GACAAAGGCAAAGAGAAGGAAGACGCCGGAAGAGAGAGAGGTTAAGATAAGAAAAAGACAACAGCGGGCTGAGGTGGTAGAAATAGCACGGAAAGTTATCGAAGACATTG
CTGATGATGCGATTGAGGAAGAACAACCAAAAGAACCTGAGGAAAAGAAAGATGCTGAACAGAGTGAACCGACAGTTGAAAACCCGCAAGAAGTGCAAGAGGAGCAAGCG
GAAGATGTGCAAGAGCAAGGAAACGGTCAGGAAACCCAAGAGCAGCAGCCAGTGAATTCGAACATTGTTCGTGAATTCTATGCGAACATAGATGATCAAGAGGGATTTCA
AGCCATGGTCCGAGCAGTGGCTGTCGATTGGAGCCGAGGAGCGATAAATTCTCTCTTCAGCCTCCGAGATTTTCCACATGCCAGATTTAATGAGATGGTGGTGGCACCAT
CTAACGATCAATTGAACGCGGCTGTTAGGGAGGTTGTATCCCGAGATAGAGTGCTGCTTGTATTTGCTATTCTGCGTTCCTTGAGTATAGATGTTGGTAAGATTATTGCG
AATGAAATCTACAATTGCTGGTGTAAGAAGGTGGGAAAGTTGTTCTTCCCAAACACAATTACCATGTTATGCAGCAGGGCAGGGGTGCCCACGATTCCAGAGGATGGTCT
TCATCTTGATAAGGGGATAATAGACACGCCCAATTTGGCTCGGCTTCAGTGCACGCATGAGGCACGCCAAGGTGGGCTGGTGTGCGACATCCACAAGATTTTAGAGCAAC
TGGTACTTTTAGCCAGTAGGCAAGAGTATGCTGAAAGGCAAGCTCAAACCTTCTGGACTTATGCTAAACGGAGGGATGCAACACTTAGGAGGGCATTGCAATCAAACTTC
TCAAAACCTTATCAGGCCTTCCCTGTTTTCCCCGATGATCTGTTTAATCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCAAGGCCAAGCGTCCCGACGCTTTTGCGTCTGGAGCCAAAAATTGGGTAGATCGGCGACTGAAGATCTTGATCGTTTCGCCTAATTCTCTTGCGTTGTTCACCAA
AACCAGCAGCAAGAACCTCTCTTTATTGCTGCAAAATGCCCTCGAACACAACCAAGTAAATTGCACCGGTATTCTCCTTGGGATTCTTGATGAGGATGCTTGTGGGAGCA
AGATTTCTAAGGTTTTAAAGTGCTGGAGCCCTATTTATTCAAAACCCCTGGTACGTTTTGCTTCACTTCATCTTCTTGCCCTCGTTCTTTGCTTTATATTTCTCTCTACC
TTGCTTTCGATTACTGTGAGATACTTTGCATCTGAAATGGCTAAAACAAGAGGCCGTAAAGAAAAAGATGCTGAGGAAGAGGAAGTGTCGATTACCCCTGAGGCACCAAA
GACAAAGGCAAAGAGAAGGAAGACGCCGGAAGAGAGAGAGGTTAAGATAAGAAAAAGACAACAGCGGGCTGAGGTGGTAGAAATAGCACGGAAAGTTATCGAAGACATTG
CTGATGATGCGATTGAGGAAGAACAACCAAAAGAACCTGAGGAAAAGAAAGATGCTGAACAGAGTGAACCGACAGTTGAAAACCCGCAAGAAGTGCAAGAGGAGCAAGCG
GAAGATGTGCAAGAGCAAGGAAACGGTCAGGAAACCCAAGAGCAGCAGCCAGTGAATTCGAACATTGTTCGTGAATTCTATGCGAACATAGATGATCAAGAGGGATTTCA
AGCCATGGTCCGAGCAGTGGCTGTCGATTGGAGCCGAGGAGCGATAAATTCTCTCTTCAGCCTCCGAGATTTTCCACATGCCAGATTTAATGAGATGGTGGTGGCACCAT
CTAACGATCAATTGAACGCGGCTGTTAGGGAGGTTGTATCCCGAGATAGAGTGCTGCTTGTATTTGCTATTCTGCGTTCCTTGAGTATAGATGTTGGTAAGATTATTGCG
AATGAAATCTACAATTGCTGGTGTAAGAAGGTGGGAAAGTTGTTCTTCCCAAACACAATTACCATGTTATGCAGCAGGGCAGGGGTGCCCACGATTCCAGAGGATGGTCT
TCATCTTGATAAGGGGATAATAGACACGCCCAATTTGGCTCGGCTTCAGTGCACGCATGAGGCACGCCAAGGTGGGCTGGTGTGCGACATCCACAAGATTTTAGAGCAAC
TGGTACTTTTAGCCAGTAGGCAAGAGTATGCTGAAAGGCAAGCTCAAACCTTCTGGACTTATGCTAAACGGAGGGATGCAACACTTAGGAGGGCATTGCAATCAAACTTC
TCAAAACCTTATCAGGCCTTCCCTGTTTTCCCCGATGATCTGTTTAATCCCTAG
Protein sequenceShow/hide protein sequence
MRKAKRPDAFASGAKNWVDRRLKILIVSPNSLALFTKTSSKNLSLLLQNALEHNQVNCTGILLGILDEDACGSKISKVLKCWSPIYSKPLVRFASLHLLALVLCFIFLST
LLSITVRYFASEMAKTRGRKEKDAEEEEVSITPEAPKTKAKRRKTPEEREVKIRKRQQRAEVVEIARKVIEDIADDAIEEEQPKEPEEKKDAEQSEPTVENPQEVQEEQA
EDVQEQGNGQETQEQQPVNSNIVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRDFPHARFNEMVVAPSNDQLNAAVREVVSRDRVLLVFAILRSLSIDVGKIIA
NEIYNCWCKKVGKLFFPNTITMLCSRAGVPTIPEDGLHLDKGIIDTPNLARLQCTHEARQGGLVCDIHKILEQLVLLASRQEYAERQAQTFWTYAKRRDATLRRALQSNF
SKPYQAFPVFPDDLFNP