; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034343 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034343
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold12:21497827..21503817
RNA-Seq ExpressionSpg034343
SyntenySpg034343
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.4e-4629.86Show/hide
Query:  QEKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIV
        QEK   IE+++E WT+V RRKK+K +  +KE R +R+ +R  K+Q+ K KK+TR+ K + +E +DF    + ITLA++FP  FL D Q E    V CH +
Subjt:  QEKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIV

Query:  DVVEDDDVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTDA--------------------------------------RKEAVED
        +  E++ +P  S        DLS F++ DLLSLPQE K++LI+AL+ S    + A                                      R++ V+ 
Subjt:  DVVEDDDVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTDA--------------------------------------RKEAVED

Query:  MKASN------------------------------------------------------------------LKN--------------------------
        +   N                                                                  LKN                          
Subjt:  MKASN------------------------------------------------------------------LKN--------------------------

Query:  ---------------SETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECPKTIK--------------------------------------
                       SE STS  K  ++ DEK SN  ILRYVPLSRRKKGESPF E P+ +K                                      
Subjt:  ---------------SETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECPKTIK--------------------------------------

Query:  ---------------------------------------KKLLKEGYSLPTTRKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSV
                                               KKLL+EG+++P +RK LGYK PEP+RITR+GK K+ D +HITV+EVD  KEK+   Q+TS 
Subjt:  ---------------------------------------KKLLKEGYSLPTTRKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSV

Query:  FRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEESTLSTPDLTRPS----VFQRLSVTTRRDKKEQFASSTSHRLQY-----ED
        F RI P VA A VF+RL V E E +  Q T+N  R   F+RLS+   +   T   P + R        Q  S    + K+     S  HR+++       
Subjt:  FRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEESTLSTPDLTRPS----VFQRLSVTTRRDKKEQFASSTSHRLQY-----ED

Query:  AMKTEKNTKADGEIRSAVPSRMKRKILVTVD-TDGSLKGKRRD
          +     K + EI S VPSRMKRK  VT++ + GSLK KR D
Subjt:  AMKTEKNTKADGEIRSAVPSRMKRKILVTVD-TDGSLKGKRRD

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]5.0e-4427.23Show/hide
Query:  IEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDD
        IE+++EGW +V  RKK++    ++ESR +++ +R  K+Q+ K KK+T + K V  E  +F  P + +TLA++ P+ FL D Q E  E V CH ++  E++
Subjt:  IEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDD

Query:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTD--------------------------------------ARKEAVE-------
         +P  S        DLS F+++DLLSLPQE K++LIDAL+ S    +                                        R++ V+       
Subjt:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTD--------------------------------------ARKEAVE-------

Query:  -------------------------------------------------DMKASNL--------------------------------------------
                                                         D+KAS L                                            
Subjt:  -------------------------------------------------DMKASNL--------------------------------------------

Query:  --------------------KNS-----------------------------------------ETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGES
                            KN+                                         E  TS  K  ++KDE  +N+P+LRYVPLSRRKKGES
Subjt:  --------------------KNS-----------------------------------------ETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGES

Query:  PFTECPKTIK-----------------------------------------------------------------------------KKLLKEGYSLPTT
        PF E PK +K                                                                             KKLL+EG+S+P +
Subjt:  PFTECPKTIK-----------------------------------------------------------------------------KKLLKEGYSLPTT

Query:  RKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEEST
        RK LGYKSPEP+RIT++GK KV DI+HIT+EE D++  K+  +Q+ SVF RIRP VA  +VF+RL + E E E  Q   +  R  VF+RL+    +EEST
Subjt:  RKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEEST

Query:  LSTPDLTRPSVFQRLSVTTRRDKKEQFASSTSH-----------------------------RLQYED-----AMKTEKNTKADGEIRSAVPSRMKRKIL
              TRPS F+RL V+ +++ +   A   +H                             R+++ D     + K    TK +GEI S VPSRMKRK  
Subjt:  LSTPDLTRPSVFQRLSVTTRRDKKEQFASSTSH-----------------------------RLQYED-----AMKTEKNTKADGEIRSAVPSRMKRKIL

Query:  VTVDT-DGSLKGKRRD
        VT++T  GSLK KR D
Subjt:  VTVDT-DGSLKGKRRD

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.3e-4427.37Show/hide
Query:  IEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDD
        IE+++EGW +V  RKK++    ++ESR +++ +R  K+Q+ K KK+T + K V  E  +F  P + +TLA++ P+ FL D Q E  E V CH ++  E++
Subjt:  IEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDD

Query:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTD--------------------------------------ARKEAVE-------
         +P  S        DLS F+++DLLSLPQE K++LIDAL+ S    +                                        R++ V+       
Subjt:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTD--------------------------------------ARKEAVE-------

Query:  -------------------------------------------------DMKASNL--------------------------------------------
                                                         D+KAS L                                            
Subjt:  -------------------------------------------------DMKASNL--------------------------------------------

Query:  --------------------KNS-----------------------------------------ETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGES
                            KN+                                         E  TS  K  ++KDE  +N+P+LRYVPLSRRKKGES
Subjt:  --------------------KNS-----------------------------------------ETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGES

Query:  PFTECPKTIK-----------------------------------------------------------------------------KKLLKEGYSLPTT
        PF E PK +K                                                                             KKLL+EG+S+P +
Subjt:  PFTECPKTIK-----------------------------------------------------------------------------KKLLKEGYSLPTT

Query:  RKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEEST
        RK LGYKSPEP+RIT++GK KV DI+HIT+EE D++  K+  +Q+ SVF RIRP VA  +VF+RL + E E E  Q   N  R  VF+RL+    +EEST
Subjt:  RKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEEST

Query:  LSTPDLTRPSVFQRLSVTTRRDKKEQFASSTSH-----------------------------RLQYED-----AMKTEKNTKADGEIRSAVPSRMKRKIL
              TRPS F+RL V+ +++ +   A   +H                             R+++ D     + K    TK +GEI S VPSRMKRK  
Subjt:  LSTPDLTRPSVFQRLSVTTRRDKKEQFASSTSH-----------------------------RLQYED-----AMKTEKNTKADGEIRSAVPSRMKRKIL

Query:  VTVDT-DGSLKGKRRD
        VT++T  GSLK KR D
Subjt:  VTVDT-DGSLKGKRRD

XP_031740568.1 uncharacterized protein LOC116403508 [Cucumis sativus]1.3e-4427.37Show/hide
Query:  IEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDD
        IE+++EGW +V  RKK++    ++ESR +++ +R  K+Q+ K KK+T + K V  E  +F  P + +TLA++ P+ FL D Q E  E V CH ++  E++
Subjt:  IEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDD

Query:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTD--------------------------------------ARKEAVE-------
         +P  S        DLS F+++DLLSLPQE K++LIDAL+ S    +                                        R++ V+       
Subjt:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTD--------------------------------------ARKEAVE-------

Query:  -------------------------------------------------DMKASNL--------------------------------------------
                                                         D+KAS L                                            
Subjt:  -------------------------------------------------DMKASNL--------------------------------------------

Query:  --------------------KNS-----------------------------------------ETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGES
                            KN+                                         E  TS  K  ++KDE  +N+P+LRYVPLSRRKKGES
Subjt:  --------------------KNS-----------------------------------------ETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGES

Query:  PFTECPKTIK-----------------------------------------------------------------------------KKLLKEGYSLPTT
        PF E PK +K                                                                             KKLL+EG+S+P +
Subjt:  PFTECPKTIK-----------------------------------------------------------------------------KKLLKEGYSLPTT

Query:  RKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEEST
        RK LGYKSPEP+RIT++GK KV DI+HIT+EE D++  K+  +Q+ SVF RIRP VA  +VF+RL + E E E  Q   N  R  VF+RL+    +EEST
Subjt:  RKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEEST

Query:  LSTPDLTRPSVFQRLSVTTRRDKKEQFASSTSH-----------------------------RLQYED-----AMKTEKNTKADGEIRSAVPSRMKRKIL
              TRPS F+RL V+ +++ +   A   +H                             R+++ D     + K    TK +GEI S VPSRMKRK  
Subjt:  LSTPDLTRPSVFQRLSVTTRRDKKEQFASSTSH-----------------------------RLQYED-----AMKTEKNTKADGEIRSAVPSRMKRKIL

Query:  VTVDT-DGSLKGKRRD
        VT++T  GSLK KR D
Subjt:  VTVDT-DGSLKGKRRD

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.7e-4427.37Show/hide
Query:  IEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDD
        IE+++EGW +V  RKK++    ++ESR +++ +R  K+Q+ K KK+T + K V  E  +F  P + +TLA++ P+ FL D Q E  E V CH ++  E++
Subjt:  IEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDD

Query:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTD--------------------------------------ARKEAVE-------
         +P  S        DLS F+++DLLSLPQE K++LIDAL+ S    +                                        R++ V+       
Subjt:  DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTD--------------------------------------ARKEAVE-------

Query:  -------------------------------------------------DMKASNL--------------------------------------------
                                                         D+KAS L                                            
Subjt:  -------------------------------------------------DMKASNL--------------------------------------------

Query:  --------------------KNS-----------------------------------------ETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGES
                            KN+                                         E  TS  K  ++KDE  +N+P+LRYVPLSRRKKGES
Subjt:  --------------------KNS-----------------------------------------ETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGES

Query:  PFTECPKTIK-----------------------------------------------------------------------------KKLLKEGYSLPTT
        PF E PK +K                                                                             KKLL+EG+S+P +
Subjt:  PFTECPKTIK-----------------------------------------------------------------------------KKLLKEGYSLPTT

Query:  RKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEEST
        RK LGYKSPEP+RIT++GK KV DI+HIT+EE D++  K+  +Q+ SVF RIRP VA  +VF+RL + E E E  Q   N  R  VF+RL+    +EEST
Subjt:  RKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEEST

Query:  LSTPDLTRPSVFQRLSVTTRRDKKEQFASSTSH-----------------------------RLQYED-----AMKTEKNTKADGEIRSAVPSRMKRKIL
              TRPS F+RL V+ +++ +   A   +H                             R+++ D     + K    TK +GEI S VPSRMKRK  
Subjt:  LSTPDLTRPSVFQRLSVTTRRDKKEQFASSTSH-----------------------------RLQYED-----AMKTEKNTKADGEIRSAVPSRMKRKIL

Query:  VTVDT-DGSLKGKRRD
        VT++T  GSLK KR D
Subjt:  VTVDT-DGSLKGKRRD

TrEMBL top hitse value%identityAlignment
A0A5A7UMY2 Reverse transcriptase domain-containing protein4.8e-3741.22Show/hide
Query:  EAKSVLIDALMESDEPQTD--ARKEAVEDMKASNLKNSETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECPKTIK----------------
        E  SV +  +   D  Q    A KE  + +   +   SE ST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E P+ +K                
Subjt:  EAKSVLIDALMESDEPQTD--ARKEAVEDMKASNLKNSETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECPKTIK----------------

Query:  ---------------------------KKLLKEGYSLPTTRKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACAL
                                   KKLL+EG+ +P +RK LGYKSPEP+RITR+GK KV D +HITV+EVD  +EK+  +Q+TS F RI P VA A 
Subjt:  ---------------------------KKLLKEGYSLPTTRKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACAL

Query:  VFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEESTLSTPDLTRPSVFQRLSVTTRRD
        VF+RL + E + +  Q T+N  R   FQRL++   EE+    T   T+PS F+RLS+T +++
Subjt:  VFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEESTLSTPDLTRPSVFQRLSVTTRRD

A0A5D3BSG5 Uncharacterized protein3.4e-3826.06Show/hide
Query:  QEKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIV
        QEK   IE+++EGWT+V RRKK+K +  +KE R +R+ ++  K+Q+ K KK+TR+ K + EE +DF    + +TLA++FP  FL D Q E    V CH +
Subjt:  QEKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIV

Query:  DVVEDDDVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTDA--------------------------------------RKEAVE-
        + +E++++P  S        DLS F++ DLLSLPQE K +LI+AL+ S    + A                                      R++ V+ 
Subjt:  DVVEDDDVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTDA--------------------------------------RKEAVE-

Query:  -------------------------------------------------------DMKASNLKN------------------------------------
                                                               D+K S L +                                    
Subjt:  -------------------------------------------------------DMKASNLKN------------------------------------

Query:  ------------SETSTSLMKPKVVKDEKCSNSPILRYVPL------------------------------------SRRKKGESPFTECPKTIK-----
                    SE  +     K       S+  +   VPL                                     +RKKGESPF E P+ +K     
Subjt:  ------------SETSTSLMKPKVVKDEKCSNSPILRYVPL------------------------------------SRRKKGESPFTECPKTIK-----

Query:  ------------------------------------------------------------------------KKLLKEGYSLPTTRKRLGYKSPEPVRIT
                                                                                KKLL+EG+ +P +RK LGYKSPEP+RIT
Subjt:  ------------------------------------------------------------------------KKLLKEGYSLPTTRKRLGYKSPEPVRIT

Query:  RRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEESTLSTPDLTRPSVFQRL
        R+GK KV D +HITV+EVD  +E +   Q+TS F RI P VA   VF+RL + E E +  Q T+N  R  VFQRL++   EE+    T   T+PS F+RL
Subjt:  RRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEESTLSTPDLTRPSVFQRL

Query:  SVTTRRDKKEQFASSTSH------RLQYEDAMKTEK----------------------------NTKADGEIRSAVPSRMKRKILVTVDT----------
        S+T +++ +   A   +        +Q + ++ T+K                              K + EIRS VPSR KRK  VT++T          
Subjt:  SVTTRRDKKEQFASSTSH------RLQYEDAMKTEK----------------------------NTKADGEIRSAVPSRMKRKILVTVDT----------

Query:  DGSLKGKRRD
         GSLK KR D
Subjt:  DGSLKGKRRD

A0A5D3BY54 Ty3-gypsy retrotransposon protein2.8e-3730.4Show/hide
Query:  QEKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVT----
        QEK   IE+++EGWT+V RRKK+K +  +KESRL+ + +R  K+Q+ K KK+TR+ K V E+ +DF    + +TLA++FP  FL D Q E    V     
Subjt:  QEKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVT----

Query:  -------------CHIVDVVEDD--------DVPASSSGTV-------------ASPGDLSSFSIKDLLSLPQEAKS--VLIDALMESDEPQTDARKEAV
                     C  +D  ++D        + P   SG V             ++   +   +++ L  L +E  +  ++I    +  +   DA+    
Subjt:  -------------CHIVDVVEDD--------DVPASSSGTV-------------ASPGDLSSFSIKDLLSLPQEAKS--VLIDALMESDEPQTDARKEAV

Query:  ED-------------MKASNLK-------------------NSETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECPKTIK-----------
         D              K  NL+                    SE STS  K  +V DEK SN PILRYVPLSRRKKGESPF E P+ +K           
Subjt:  ED-------------MKASNLK-------------------NSETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECPKTIK-----------

Query:  ------------------------------------------------------------------KKLLKEGYSLPTTRKRLGYKSPEPVRITRRGKAK
                                                                          KKLL+EG+++P +RK LGYK PEP+RITR+GK K
Subjt:  ------------------------------------------------------------------KKLLKEGYSLPTTRKRLGYKSPEPVRITRRGKAK

Query:  VADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEESTLSTPDLTRPSVFQRLSVTTRR
        V D +HITV+EVD  +EK+   Q+TS F R+ P VA A VF+RL + E E +  Q T++  R   FQRL+M    E+ +L    + R  V   L+ + + 
Subjt:  VADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEESTLSTPDLTRPSVFQRLSVTTRR

Query:  DKKEQFASSTSHRLQYEDAMKTE
        D +++    + H +   + ++ E
Subjt:  DKKEQFASSTSHRLQYEDAMKTE

A0A5D3C0W6 Ty3-gypsy retrotransposon protein1.2e-4629.86Show/hide
Query:  QEKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIV
        QEK   IE+++E WT+V RRKK+K +  +KE R +R+ +R  K+Q+ K KK+TR+ K + +E +DF    + ITLA++FP  FL D Q E    V CH +
Subjt:  QEKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIV

Query:  DVVEDDDVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTDA--------------------------------------RKEAVED
        +  E++ +P  S        DLS F++ DLLSLPQE K++LI+AL+ S    + A                                      R++ V+ 
Subjt:  DVVEDDDVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTDA--------------------------------------RKEAVED

Query:  MKASN------------------------------------------------------------------LKN--------------------------
        +   N                                                                  LKN                          
Subjt:  MKASN------------------------------------------------------------------LKN--------------------------

Query:  ---------------SETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECPKTIK--------------------------------------
                       SE STS  K  ++ DEK SN  ILRYVPLSRRKKGESPF E P+ +K                                      
Subjt:  ---------------SETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECPKTIK--------------------------------------

Query:  ---------------------------------------KKLLKEGYSLPTTRKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSV
                                               KKLL+EG+++P +RK LGYK PEP+RITR+GK K+ D +HITV+EVD  KEK+   Q+TS 
Subjt:  ---------------------------------------KKLLKEGYSLPTTRKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSV

Query:  FRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEESTLSTPDLTRPS----VFQRLSVTTRRDKKEQFASSTSHRLQY-----ED
        F RI P VA A VF+RL V E E +  Q T+N  R   F+RLS+   +   T   P + R        Q  S    + K+     S  HR+++       
Subjt:  FRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGEEESTLSTPDLTRPS----VFQRLSVTTRRDKKEQFASSTSHRLQY-----ED

Query:  AMKTEKNTKADGEIRSAVPSRMKRKILVTVD-TDGSLKGKRRD
          +     K + EI S VPSRMKRK  VT++ + GSLK KR D
Subjt:  AMKTEKNTKADGEIRSAVPSRMKRKILVTVD-TDGSLKGKRRD

A0A5D3DXC7 Reverse transcriptase domain-containing protein1.5e-4137.68Show/hide
Query:  ARKEAVEDMKASNLKNSETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECPKTIK-------------------------------------
        A KE  + +   +   SE ST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E P+ +K                                     
Subjt:  ARKEAVEDMKASNLKNSETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECPKTIK-------------------------------------

Query:  ----------------KKLLKEGYSLPTTRKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETE
                        KKLL+EG+ +P +RK LGYKSPEP+RITR+GK KV D +HITV+EVD  +EK+  +Q+TS F RI P VA A VF+RL + E E
Subjt:  ----------------KKLLKEGYSLPTTRKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETE

Query:  EESAQPTNNSTRSLVFQRLSMFIGEEESTLSTPDLTRPSVFQRLSVTTRRDKKEQFASSTSH------RLQYEDAMKTEK--------------------
         +  Q T+N  +   FQRL++   EE+    T   T+PS F+RLS+T +++ +   A   +        +Q + ++ T+K                    
Subjt:  EESAQPTNNSTRSLVFQRLSMFIGEEESTLSTPDLTRPSVFQRLSVTTRRDKKEQFASSTSH------RLQYEDAMKTEK--------------------

Query:  --------NTKADGEIRSAVPSRMKRKILVTVDT-DGSLKGKRRD
                  K + EIRS VPSRMKRK  VT++T  GSLK KR D
Subjt:  --------NTKADGEIRSAVPSRMKRKILVTVDT-DGSLKGKRRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGATTCCAAGAAAAATATGATTCCATCGAAGATGAGAATGAAGGTTGGACCCTCGTCGTTCGTCGCAAAAAACAAAAGCAAAGTTACGCACGAAAAGAGTCCCG
CCTATTTCGAGATAGTAAAAGAAAGGTTAAGTCTCAAAGAAAGAAGGGAAAAAAGAGGACAAGGAGGTCAAAGTCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGTCCTC
CACAACCCATAACTTTGGCAGAATACTTCCCAAGATGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCCTGCTAGTTCCTCGGGAACGGTGGCAAGTCCAGGAGACTTATCCTCCTTCAGCATAAAAGACTTATTGTCACTTCCTCAGGAAGCTAAAAGTGTCCTTATTGA
TGCATTGATGGAGTCCGATGAGCCACAAACAGATGCAAGAAAGGAAGCTGTTGAAGATATGAAGGCATCCAACCTGAAAAACAGTGAAACGTCTACAAGCCTTATGAAAC
CTAAGGTTGTAAAAGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCTTTATCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTCCAAAAACCATA
AAGAAGAAGCTTCTAAAAGAAGGTTATAGTCTGCCTACAACGAGAAAAAGACTTGGATATAAGTCGCCTGAGCCGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGC
AGACATAAGTCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAAAGAGTGTCGACCAACAAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTTGTGCTT
TAGTCTTTCAGAGGTTAATTGTGAATGAAACAGAAGAAGAAAGTGCACAACCTACCAATAACTCCACTCGATCTTTAGTTTTTCAAAGGTTAAGTATGTTCATTGGGGAA
GAAGAGAGTACACTATCAACTCCGGATTTGACTCGACCATCAGTTTTTCAAAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAACAGTTTGCTTCGTCGACTTCTCA
CCGACTTCAATATGAAGATGCGATGAAAACTGAAAAGAACACGAAGGCCGATGGAGAAATTCGTAGTGCAGTTCCTTCACGAATGAAAAGAAAAATCCTTGTTACTGTCG
ATACTGATGGTTCTTTGAAGGGAAAGAGACGTGATACTCACAGTTGCACTCTTCTCACTGCAGACATATTTTATGTGTCCACGGATATAGACCAATATCGACTAGTTAGT
CCTTCACGAGTGTCTGAAACACCAGCTGGGTCAAATTACCGTTTTACCCCTGGGTTACTTCTATTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGATTCCAAGAAAAATATGATTCCATCGAAGATGAGAATGAAGGTTGGACCCTCGTCGTTCGTCGCAAAAAACAAAAGCAAAGTTACGCACGAAAAGAGTCCCG
CCTATTTCGAGATAGTAAAAGAAAGGTTAAGTCTCAAAGAAAGAAGGGAAAAAAGAGGACAAGGAGGTCAAAGTCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGTCCTC
CACAACCCATAACTTTGGCAGAATACTTCCCAAGATGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCCTGCTAGTTCCTCGGGAACGGTGGCAAGTCCAGGAGACTTATCCTCCTTCAGCATAAAAGACTTATTGTCACTTCCTCAGGAAGCTAAAAGTGTCCTTATTGA
TGCATTGATGGAGTCCGATGAGCCACAAACAGATGCAAGAAAGGAAGCTGTTGAAGATATGAAGGCATCCAACCTGAAAAACAGTGAAACGTCTACAAGCCTTATGAAAC
CTAAGGTTGTAAAAGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCTTTATCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTCCAAAAACCATA
AAGAAGAAGCTTCTAAAAGAAGGTTATAGTCTGCCTACAACGAGAAAAAGACTTGGATATAAGTCGCCTGAGCCGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGC
AGACATAAGTCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAAAGAGTGTCGACCAACAAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTTGTGCTT
TAGTCTTTCAGAGGTTAATTGTGAATGAAACAGAAGAAGAAAGTGCACAACCTACCAATAACTCCACTCGATCTTTAGTTTTTCAAAGGTTAAGTATGTTCATTGGGGAA
GAAGAGAGTACACTATCAACTCCGGATTTGACTCGACCATCAGTTTTTCAAAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAACAGTTTGCTTCGTCGACTTCTCA
CCGACTTCAATATGAAGATGCGATGAAAACTGAAAAGAACACGAAGGCCGATGGAGAAATTCGTAGTGCAGTTCCTTCACGAATGAAAAGAAAAATCCTTGTTACTGTCG
ATACTGATGGTTCTTTGAAGGGAAAGAGACGTGATACTCACAGTTGCACTCTTCTCACTGCAGACATATTTTATGTGTCCACGGATATAGACCAATATCGACTAGTTAGT
CCTTCACGAGTGTCTGAAACACCAGCTGGGTCAAATTACCGTTTTACCCCTGGGTTACTTCTATTTCCTTAA
Protein sequenceShow/hide protein sequence
MKRFQEKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQRKKGKKRTRRSKSVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEALETVTCHIVDVVEDD
DVPASSSGTVASPGDLSSFSIKDLLSLPQEAKSVLIDALMESDEPQTDARKEAVEDMKASNLKNSETSTSLMKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECPKTI
KKKLLKEGYSLPTTRKRLGYKSPEPVRITRRGKAKVADISHITVEEVDDSKEKKSVDQQTSVFRRIRPPVACALVFQRLIVNETEEESAQPTNNSTRSLVFQRLSMFIGE
EESTLSTPDLTRPSVFQRLSVTTRRDKKEQFASSTSHRLQYEDAMKTEKNTKADGEIRSAVPSRMKRKILVTVDTDGSLKGKRRDTHSCTLLTADIFYVSTDIDQYRLVS
PSRVSETPAGSNYRFTPGLLLFP