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Spg034350 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034350
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold12:21125392..21130826
RNA-Seq ExpressionSpg034350
SyntenySpg034350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]2.0e-0835.43Show/hide
Query:  GSAQSIESAAALASRP-QEETIEQNVLNPPGFAPQTQENKKLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKA
        G++ S E  AA  +    E TIEQ        +   ++   LEDL+GAFI E  +R +++E  V  +   + G+  +IKN+E Q+GQ+   ++TM KGK 
Subjt:  GSAQSIESAAALASRP-QEETIEQNVLNPPGFAPQTQENKKLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKA

Query:  PAEQEKTQMEYCKAITVHQEEAEEEPE
        P++ E    E+CKA+T+   +  +EPE
Subjt:  PAEQEKTQMEYCKAITVHQEEAEEEPE

XP_022843226.1 uncharacterized protein LOC111366761 [Olea europaea var. sylvestris]1.6e-0840.82Show/hide
Query:  PPGFAPQTQENK-KLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVHQEEAEEE
        PPGF  Q  + K  LED++G FI+E+ +R  K E  +  I T V+  GA +KN+E Q+GQL +++ +  KGK P++ E    E+C AIT+   +  EE
Subjt:  PPGFAPQTQENK-KLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVHQEEAEEE

XP_022855495.1 uncharacterized protein LOC111376753 [Olea europaea var. sylvestris]1.2e-0840.82Show/hide
Query:  PPGFAPQTQENK-KLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVHQEEAEEE
        PPGF  Q  + K  LED++G FI+E+ +R  K E  +  I T V+  GA +KN+E Q+GQL + + +  KGK P++ E    E+C AIT+   +  EE
Subjt:  PPGFAPQTQENK-KLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVHQEEAEEE

XP_022868848.1 uncharacterized protein LOC111388394 [Olea europaea var. sylvestris]9.1e-0940.82Show/hide
Query:  PPGFAPQTQENK-KLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVHQEEAEEE
        PPGF  Q  + K  LED++G FI+E+ +R  K E  +  I T V+  GA +KN+E Q+GQL + + +  KGK P++ E    E+C AIT+   +  EE
Subjt:  PPGFAPQTQENK-KLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVHQEEAEEE

XP_022883717.1 uncharacterized protein LOC111400543 [Olea europaea var. sylvestris]1.2e-0839.6Show/hide
Query:  PPGFAPQTQENK-KLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVH--QEEAEEE
        PPGF  Q  + K  LED++G FI+E+ +R  K E  +  I T V+  GA +KN+E Q+GQL + + +  KGK P++ E    E+CKA+ +   ++  E E
Subjt:  PPGFAPQTQENK-KLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVH--QEEAEEE

Query:  P
        P
Subjt:  P

TrEMBL top hitse value%identityAlignment
A0A2I4F4C8 uncharacterized protein LOC1089953731.6e-0634.78Show/hide
Query:  ASRPQEETIEQNVLNPPGF-APQTQENKKLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYC
        AS+ Q + I     N  GF + Q+++N  LED + +F+ E++ R  K +  +  I+   +  GAAIKNIE Q+G+L ++++   +G  P+  E    E C
Subjt:  ASRPQEETIEQNVLNPPGF-APQTQENKKLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYC

Query:  KAITVHQ-EEAEEEP
        KAIT+    E E  P
Subjt:  KAITVHQ-EEAEEEP

A0A2P5B1T0 Uncharacterized protein1.3e-0536.11Show/hide
Query:  TIEQNVLNPPGFAPQTQENKK--LEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVH
        T  +NVL PP    Q+   KK  LED++  FI E+  R  K E  +  I    N   A IK++E Q+GQL + +     GK P + E     +CKAIT+ 
Subjt:  TIEQNVLNPPGFAPQTQENKK--LEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVH

Query:  QEEAEEEP
          +  E P
Subjt:  QEEAEEEP

A0A2P5BPI6 Uncharacterized protein9.2e-0737.86Show/hide
Query:  QNVLN-PPGFAPQTQENK-KLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVHQEE
        +NVL  PPGF P   E K  LEDL+  FI E+  +  K E  +  I T  N   A +K++E Q+GQL + +     GK P++ E    ++CKAIT+   +
Subjt:  QNVLN-PPGFAPQTQENK-KLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVHQEE

Query:  AEE
          E
Subjt:  AEE

A0A6J1DU19 uncharacterized protein LOC1110243619.9e-0935.43Show/hide
Query:  GSAQSIESAAALASRP-QEETIEQNVLNPPGFAPQTQENKKLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKA
        G++ S E  AA  +    E TIEQ        +   ++   LEDL+GAFI E  +R +++E  V  +   + G+  +IKN+E Q+GQ+   ++TM KGK 
Subjt:  GSAQSIESAAALASRP-QEETIEQNVLNPPGFAPQTQENKKLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKA

Query:  PAEQEKTQMEYCKAITVHQEEAEEEPE
        P++ E    E+CKA+T+   +  +EPE
Subjt:  PAEQEKTQMEYCKAITVHQEEAEEEPE

A0A6P9DWY0 uncharacterized protein LOC1183440261.9e-0739.62Show/hide
Query:  QNVLNP-PGFAPQTQENK-KLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVHQ-E
        +NVL P PGF  Q  E K  LED + +F+ E++ R  K +  +  I T  +  GAAIKNIE Q+GQL + ++   +G  P+  E    E CKAIT+    
Subjt:  QNVLNP-PGFAPQTQENK-KLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVHQ-E

Query:  EAEEEP
        E +  P
Subjt:  EAEEEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATTGGAGCTATAATGCCATATTAGAGTTAATCGGGTGCTCGGGGCGTGAAAAGATGCAAAGGAATGAAAAGAGTAAAAGTGGAAAAAAGTCAAATCTAGGTCA
ACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTCACAGCGTCGAGACGCTATGATAGGAAGCGTC
CCGACGCTACCGTTTTTCCTCATTCAGAACGCGCGTATAAGAGGCAGCGTCGCGACGCTGTCTTGACAGCGTTAGTTTCCTTATTTGCATTTTGTACAGGGAGTGCACAG
TCAATTGAATCAGCTGCTGCTTTAGCATCTCGACCTCAGGAGGAGACTATTGAACAGAATGTTCTTAACCCTCCTGGTTTTGCCCCTCAAACTCAAGAAAATAAAAAGTT
AGAAGATCTTGTTGGAGCTTTCATTGCAGAGTCTAGTAACAGGACAACCAAATTAGAGGAGACAGTCTTTGCCATCAACACCACGGTGAATGGCCACGGTGCTGCCATCA
AGAATATTGAGACTCAGCTGGGACAGTTGGTAAGTGTTGTAAGTACCATGAATAAAGGTAAGGCCCCAGCTGAACAGGAGAAAACTCAGATGGAGTACTGTAAGGCAATC
ACTGTGCATCAGGAGGAAGCTGAAGAGGAGCCTGAGATAGGCTTTCTTGTCAATTTTCAAGCTTGTGATGAGATATTTGGATTTGAATGCTTAGGAGCGAATTATTGGGT
TCATATGCTTGTTGTCACCTCGATAGGTGAAATGGTTGATTGGAGCTATAATGCCATATTAGAGTTAATCGGGTGCTCGGGGCGTGAAAAGATGCAAAGGAATGAAAAGA
GTAAAAGTGGAAAAAAGTCAAATCTAGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTC
ACAGCGTCGAGACGCTATGATAGGAAGCGTCCCGACGCTACCGTTTTTCCTCATTCAGAACGCGCGTATAAGAGGCAGCGTCGCGACGCTGTCTTGACAGCGTCTCGACG
CTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATTGGAGCTATAATGCCATATTAGAGTTAATCGGGTGCTCGGGGCGTGAAAAGATGCAAAGGAATGAAAAGAGTAAAAGTGGAAAAAAGTCAAATCTAGGTCA
ACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTCACAGCGTCGAGACGCTATGATAGGAAGCGTC
CCGACGCTACCGTTTTTCCTCATTCAGAACGCGCGTATAAGAGGCAGCGTCGCGACGCTGTCTTGACAGCGTTAGTTTCCTTATTTGCATTTTGTACAGGGAGTGCACAG
TCAATTGAATCAGCTGCTGCTTTAGCATCTCGACCTCAGGAGGAGACTATTGAACAGAATGTTCTTAACCCTCCTGGTTTTGCCCCTCAAACTCAAGAAAATAAAAAGTT
AGAAGATCTTGTTGGAGCTTTCATTGCAGAGTCTAGTAACAGGACAACCAAATTAGAGGAGACAGTCTTTGCCATCAACACCACGGTGAATGGCCACGGTGCTGCCATCA
AGAATATTGAGACTCAGCTGGGACAGTTGGTAAGTGTTGTAAGTACCATGAATAAAGGTAAGGCCCCAGCTGAACAGGAGAAAACTCAGATGGAGTACTGTAAGGCAATC
ACTGTGCATCAGGAGGAAGCTGAAGAGGAGCCTGAGATAGGCTTTCTTGTCAATTTTCAAGCTTGTGATGAGATATTTGGATTTGAATGCTTAGGAGCGAATTATTGGGT
TCATATGCTTGTTGTCACCTCGATAGGTGAAATGGTTGATTGGAGCTATAATGCCATATTAGAGTTAATCGGGTGCTCGGGGCGTGAAAAGATGCAAAGGAATGAAAAGA
GTAAAAGTGGAAAAAAGTCAAATCTAGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTC
ACAGCGTCGAGACGCTATGATAGGAAGCGTCCCGACGCTACCGTTTTTCCTCATTCAGAACGCGCGTATAAGAGGCAGCGTCGCGACGCTGTCTTGACAGCGTCTCGACG
CTAA
Protein sequenceShow/hide protein sequence
MVDWSYNAILELIGCSGREKMQRNEKSKSGKKSNLGQQQASVETLALERLDAHIPYQIRRVKLTASRRYDRKRPDATVFPHSERAYKRQRRDAVLTALVSLFAFCTGSAQ
SIESAAALASRPQEETIEQNVLNPPGFAPQTQENKKLEDLVGAFIAESSNRTTKLEETVFAINTTVNGHGAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAI
TVHQEEAEEEPEIGFLVNFQACDEIFGFECLGANYWVHMLVVTSIGEMVDWSYNAILELIGCSGREKMQRNEKSKSGKKSNLGQQQASVETLALERLDAHIPYQIRRVKL
TASRRYDRKRPDATVFPHSERAYKRQRRDAVLTASRR