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Spg034353 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034353
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description3-hydroxyisobutyrate dehydrogenase
Genome locationscaffold12:23641702..23642718
RNA-Seq ExpressionSpg034353
SyntenySpg034353
Gene Ontology termsGO:0009083 - branched-chain amino acid catabolic process (biological process)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0050661 - NADP binding (molecular function)
InterPro domainsIPR002204 - 3-hydroxyisobutyrate dehydrogenase-related, conserved site
IPR006115 - 6-phosphogluconate dehydrogenase, NADP-binding
IPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4207722.1 hypothetical protein ERO13_A03G089001v2, partial [Gossypium hirsutum]6.9e-0747.06Show/hide
Query:  LSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC
        ++  R  A+ S +L +  + S+    +++ S++  ++VGFIGLGNMGSRMANNL++AGYKM VHD+ C
Subjt:  LSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC

KAG4207726.1 hypothetical protein ERO13_A03G089001v2 [Gossypium hirsutum]6.9e-0747.06Show/hide
Query:  LSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC
        ++  R  A+ S +L +  + S+    +++ S++  ++VGFIGLGNMGSRMANNL++AGYKM VHD+ C
Subjt:  LSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC

MBA0798199.1 hypothetical protein [Gossypium harknessii]4.0e-0751.56Show/hide
Query:  RRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC
        R  A+ S +L +  + S+    ++S S++  ++VGFIGLGNMGSRMANNL++AGYKM VHD+ C
Subjt:  RRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC

MBA0828212.1 hypothetical protein [Gossypium armourianum]4.0e-0751.56Show/hide
Query:  RRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC
        R  A+ S +L +  + S+    ++S S++  ++VGFIGLGNMGSRMANNL++AGYKM VHD+ C
Subjt:  RRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC

TYI35895.1 hypothetical protein ES332_A03G106800v1 [Gossypium tomentosum]6.9e-0747.06Show/hide
Query:  LSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC
        ++  R  A+ S +L +  + S+    +++ S++  ++VGFIGLGNMGSRMANNL++AGYKM VHD+ C
Subjt:  LSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC

TrEMBL top hitse value%identityAlignment
A0A5D2R5M3 3-hydroxyisobutyrate dehydrogenase3.3e-0747.06Show/hide
Query:  LSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC
        ++  R  A+ S +L +  + S+    +++ S++  ++VGFIGLGNMGSRMANNL++AGYKM VHD+ C
Subjt:  LSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC

A0A5D2R831 3-hydroxyisobutyrate dehydrogenase3.3e-0747.06Show/hide
Query:  LSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC
        ++  R  A+ S +L +  + S+    +++ S++  ++VGFIGLGNMGSRMANNL++AGYKM VHD+ C
Subjt:  LSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC

A0A5D2R8R6 Uncharacterized protein3.3e-0747.06Show/hide
Query:  LSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC
        ++  R  A+ S +L +  + S+    +++ S++  ++VGFIGLGNMGSRMANNL++AGYKM VHD+ C
Subjt:  LSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC

A0A7J9GKV1 Uncharacterized protein2.0e-0751.56Show/hide
Query:  RRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC
        R  A+ S +L +  + S+    ++S S++  ++VGFIGLGNMGSRMANNL++AGYKM VHD+ C
Subjt:  RRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC

A0A7J9J1C4 Uncharacterized protein2.0e-0751.56Show/hide
Query:  RRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC
        R  A+ S +L +  + S+    ++S S++  ++VGFIGLGNMGSRMANNL++AGYKM VHD+ C
Subjt:  RRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYC

SwissProt top hitse value%identityAlignment
P29266 3-hydroxyisobutyrate dehydrogenase, mitochondrial5.7e-0444.68Show/hide
Query:  SIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMY
        S+A + ++S ++     VGFIGLGNMG+ MA NLI+ GY ++++D++
Subjt:  SIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMY

P31937 3-hydroxyisobutyrate dehydrogenase, mitochondrial9.7e-0442.55Show/hide
Query:  SIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMY
        S A + ++S ++     VGFIGLGNMG+ MA NL++ GY ++++D++
Subjt:  SIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMY

Q5R5E7 3-hydroxyisobutyrate dehydrogenase, mitochondrial9.7e-0442.55Show/hide
Query:  SIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMY
        S A + ++S ++     VGFIGLGNMG+ MA NL++ GY ++++D++
Subjt:  SIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMY

Q9SUC0 Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial1.1e-0758.7Show/hide
Query:  SIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDM
        S+    + S ++N  Q+VGFIGLGNMG RM NNLI AGYK+ VHD+
Subjt:  SIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDM

Q9V8M5 Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial1.1e-0446.51Show/hide
Query:  TLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDM
        TL+   ++    +++GF+GLGNMG+ MA+NLI+AG+K+ V D+
Subjt:  TLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDM

Arabidopsis top hitse value%identityAlignment
AT4G20930.1 6-phosphogluconate dehydrogenase family protein7.9e-0958.7Show/hide
Query:  SIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDM
        S+    + S ++N  Q+VGFIGLGNMG RM NNLI AGYK+ VHD+
Subjt:  SIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCAAAAAATGGGACAGCGTCGCGACGCTATCGGCACAACGTCGCAACGCTGTGACGTCAGCCAACTTGTTCGCCAAGAAATGGGACAGCATCGCGACGCTAATAAATAA
AAGTGCCTCTAACAATGTTTTGCAGAGTGTTGGATTCATTGGACTGGGAAATATGGGATCCAGAATGGCAAATAATCTAATAGAGGCTGGATACAAAATGGTTGTACATG
ACATGTACTGTACTTGA
mRNA sequenceShow/hide mRNA sequence
GCCAAAAAATGGGACAGCGTCGCGACGCTATCGGCACAACGTCGCAACGCTGTGACGTCAGCCAACTTGTTCGCCAAGAAATGGGACAGCATCGCGACGCTAATAAATAA
AAGTGCCTCTAACAATGTTTTGCAGAGTGTTGGATTCATTGGACTGGGAAATATGGGATCCAGAATGGCAAATAATCTAATAGAGGCTGGATACAAAATGGTTGTACATG
ACATGTACTGTACTTGA
Protein sequenceShow/hide protein sequence
AKKWDSVATLSAQRRNAVTSANLFAKKWDSIATLINKSASNNVLQSVGFIGLGNMGSRMANNLIEAGYKMVVHDMYCT