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Spg034363 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034363
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold12:21932580..21936050
RNA-Seq ExpressionSpg034363
SyntenySpg034363
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.2e-1436.09Show/hide
Query:  VAVDWSPGAINSLFNLQD--FSHAEYNE-------------MAAAPSNGQLNAAVAY------IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAIL
        V V WS  AIN++F L D    H+E+ E             +A A +   ++A  AY      +   A  W  F+K  LLPTTH  TVS D +LL  ++L
Subjt:  VAVDWSPGAINSLFNLQD--FSHAEYNE-------------MAAAPSNGQLNAAVAY------IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAIL

Query:  ISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRLQRTQE
        I  +I+VG++I +E+  C  +K   LFFP+ IT LC+ A  P    +  L + G ID   + R+  TQE
Subjt:  ISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.6e-2030.68Show/hide
Query:  VAVDWSPGAINSLFNLQD--FSHAEY-------------NEMAAAPSNGQLNAAVAY------IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAIL
        V V WS  AIN++F L D    H+E+               +AAA +   ++A  AY      +   A  W  F+K RLLPTTH  TVS D +LL  ++L
Subjt:  VAVDWSPGAINSLFNLQD--FSHAEY-------------NEMAAAPSNGQLNAAVAY------IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAIL

Query:  ISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRL------QRTQE------------ACQGGLVCGIHSI
        I  +I+VG++I +E+  C  +K   LFFP+ IT LC+ A  P    +  L + G ID   + R+      + TQ+               G ++  + ++
Subjt:  ISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRL------QRTQE------------ACQGGLVCGIHSI

Query:  QEKLQL-------VLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPL
        +++L         ++S L+ + ++ Q +W+Y+K RD   KKALQ     P+
Subjt:  QEKLQL-------VLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]6.2e-1730.3Show/hide
Query:  NGQLNAAVAYIKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAILISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDK
        N  LNA    +   A  W  F+K RLLPTTH  TVS D +LL +++L   +I+VG++I +E+  C  +K   LFFP+ IT LC+ A  P    +  L   
Subjt:  NGQLNAAVAYIKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAILISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDK

Query:  GIIDTPNLVRLQR------------------TQEACQGGLVCGIHSIQEKLQL-------VLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPL
        G ID   + R+ +                  +     G ++  + +++++L         ++S L+ + ++ Q +W+Y+K RD   KKALQ     P+
Subjt:  GIIDTPNLVRLQR------------------TQEACQGGLVCGIHSIQEKLQL-------VLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]4.3e-1832.5Show/hide
Query:  VAVDWSPGAINSLFNLQD--FSHAEYNE-------------MAAAPSNGQLNAAVAY------IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAIL
        V V WS  AIN++F L D    H+E+ E             +AAA +   ++A  AY      +   A  W  F+K RLLPTTH   VS D +LL  ++L
Subjt:  VAVDWSPGAINSLFNLQD--FSHAEYNE-------------MAAAPSNGQLNAAVAY------IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAIL

Query:  ISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRL------QRTQEACQGGLVCGIHS------IQE--KL
           +I+VG++I +E+  C  +K   LFFP+ IT LC+ A    + E   L + G ID   + R+      + TQ+           S      +Q+   L
Subjt:  ISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRL------QRTQEACQGGLVCGIHS------IQE--KL

Query:  QLVLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPL
        +  LS+ E + ++ Q +W+Y+K RD   KKALQ     P+
Subjt:  QLVLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPL

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]7.1e-1328.72Show/hide
Query:  IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAILISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILM---DKGIIDTPN
        +K  AN W+ F++  L PTTHDS++S + ++L + ++    I+VGK++   +  C +++  KLFFP+ I  L  +AGVP   +D+++    +K  ID   
Subjt:  IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAILISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILM---DKGIIDTPN

Query:  LVRLQRTQEACQGGLVCGI-HSIQEKLQLVLSRLEF--SERENQTYWSYTKIRDVTT---------KKALQKRAQDPLHEAIGPKEMKEAKKLSQ
        + +L+   E  +G  + G+  +++E L+   S ++F   +R        T   D+TT         KK  +K  +D L   +  K  +  KKL++
Subjt:  LVRLQRTQEACQGGLVCGI-HSIQEKLQLVLSRLEF--SERENQTYWSYTKIRDVTT---------KKALQKRAQDPLHEAIGPKEMKEAKKLSQ

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.1e-1436.09Show/hide
Query:  VAVDWSPGAINSLFNLQD--FSHAEYNE-------------MAAAPSNGQLNAAVAY------IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAIL
        V V WS  AIN++F L D    H+E+ E             +A A +   ++A  AY      +   A  W  F+K  LLPTTH  TVS D +LL  ++L
Subjt:  VAVDWSPGAINSLFNLQD--FSHAEYNE-------------MAAAPSNGQLNAAVAY------IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAIL

Query:  ISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRLQRTQE
        I  +I+VG++I +E+  C  +K   LFFP+ IT LC+ A  P    +  L + G ID   + R+  TQE
Subjt:  ISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)2.2e-2030.68Show/hide
Query:  VAVDWSPGAINSLFNLQD--FSHAEY-------------NEMAAAPSNGQLNAAVAY------IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAIL
        V V WS  AIN++F L D    H+E+               +AAA +   ++A  AY      +   A  W  F+K RLLPTTH  TVS D +LL  ++L
Subjt:  VAVDWSPGAINSLFNLQD--FSHAEY-------------NEMAAAPSNGQLNAAVAY------IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAIL

Query:  ISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRL------QRTQE------------ACQGGLVCGIHSI
        I  +I+VG++I +E+  C  +K   LFFP+ IT LC+ A  P    +  L + G ID   + R+      + TQ+               G ++  + ++
Subjt:  ISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRL------QRTQE------------ACQGGLVCGIHSI

Query:  QEKLQL-------VLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPL
        +++L         ++S L+ + ++ Q +W+Y+K RD   KKALQ     P+
Subjt:  QEKLQL-------VLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPL

A0A2P5CEY2 Uncharacterized protein3.0e-1730.3Show/hide
Query:  NGQLNAAVAYIKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAILISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDK
        N  LNA    +   A  W  F+K RLLPTTH  TVS D +LL +++L   +I+VG++I +E+  C  +K   LFFP+ IT LC+ A  P    +  L   
Subjt:  NGQLNAAVAYIKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAILISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDK

Query:  GIIDTPNLVRLQR------------------TQEACQGGLVCGIHSIQEKLQL-------VLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPL
        G ID   + R+ +                  +     G ++  + +++++L         ++S L+ + ++ Q +W+Y+K RD   KKALQ     P+
Subjt:  GIIDTPNLVRLQR------------------TQEACQGGLVCGIHSIQEKLQL-------VLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPL

A0A2P5DXM3 Uncharacterized protein2.1e-1832.5Show/hide
Query:  VAVDWSPGAINSLFNLQD--FSHAEYNE-------------MAAAPSNGQLNAAVAY------IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAIL
        V V WS  AIN++F L D    H+E+ E             +AAA +   ++A  AY      +   A  W  F+K RLLPTTH   VS D +LL  ++L
Subjt:  VAVDWSPGAINSLFNLQD--FSHAEYNE-------------MAAAPSNGQLNAAVAY------IKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAIL

Query:  ISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRL------QRTQEACQGGLVCGIHS------IQE--KL
           +I+VG++I +E+  C  +K   LFFP+ IT LC+ A    + E   L + G ID   + R+      + TQ+           S      +Q+   L
Subjt:  ISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRL------QRTQEACQGGLVCGIHS------IQE--KL

Query:  QLVLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPL
        +  LS+ E + ++ Q +W+Y+K RD   KKALQ     P+
Subjt:  QLVLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPL

A0A5D2B8V0 Uncharacterized protein5.9e-1340.18Show/hide
Query:  YIKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAILISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLV
        Y+K  A  W  FV+   +P +H ST+S +W+LL +AIL   +I+VGKII  E+ NC +KK    +FP+ IT LC +A V           +G I   +L 
Subjt:  YIKSEANTWLGFVKQRLLPTTHDSTVSWDWVLLGFAILISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLV

Query:  RL-QRTQEACQG
        RL +R  E  QG
Subjt:  RL-QRTQEACQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATACCTTCACCACAAAGTGTTGATAAGCTAGAACGAAGAAAACAGAGGAATCTGGAAAATTCCCAGAAATGCGACCCCATTTCTGGTAAGGCTAAAATGAAATGC
GACCGCATTTCTGGGCAGAGTGAAAAGTTGTTCATTTTCATTATATTTCATCATTCCACATTGCATCAAGTAGCAGTAGACTGGAGCCCTGGGGCTATCAATTCT
TTATTTAATCTGCAAGATTTCTCTCACGCAGAATACAATGAGATGGCAGCAGCGCCATCTAATGGGCAGCTTAATGCGGCTGTTGCCTACATCAAGAGCGAGGCA
AACACATGGCTGGGATTCGTCAAGCAGCGCCTGCTTCCAACTACTCATGATTCAACAGTATCTTGGGATTGGGTTCTCCTAGGTTTTGCAATTCTCATATCTCTC
AATATCGATGTCGGAAAAATAATCTCCAACGAAGTTCATAATTGCTGGAGGAAAAAGGTTGCCAAGTTATTCTTCCCCAACACAATTACAATGTTGTGTCAGAGG
GCAGGGGTTCCAACGAGCAATGAAGATATTATTTTGATGGATAAGGGGATTATTGACACACCGAATTTGGTGAGGCTGCAAAGGACTCAGGAGGCATGCCAAGGT
GGTTTGGTGTGTGGCATCCATAGTATTCAGGAGAAATTACAACTGGTGCTCAGTCGTTTGGAGTTCTCTGAAAGGGAGAATCAAACGTACTGGAGCTATACAAAG
ATAAGGGATGTCACCACCAAAAAGGCTTTGCAAAAAAGAGCCCAAGATCCACTACATGAAGCAATTGGGCCAAAGGAAATGAAGGAGGCCAAAAAATTGAGTCAA
AATCGGACCATTCTAGAAGATCCAGGGCCTAGCGTCGCGACGCTAGGCCGAAGTGTCTCGACGCTAGGCAACTATGCGGAAAGATCCAGAAATGGGGTAGCGTCG
CGACACTGCGATGACTTGGAGCCCAAGAAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATACCTTCACCACAAAGTGTTGATAAGCTAGAACGAAGAAAACAGAGGAATCTGGAAAATTCCCAGAAATGCGACCCCATTTCTGGTAAGGCTAAAATGAAATGC
GACCGCATTTCTGGGCAGAGTGAAAAGTTGTTCATTTTCATTATATTTCATCATTCCACATTGCATCAAGTAGCAGTAGACTGGAGCCCTGGGGCTATCAATTCT
TTATTTAATCTGCAAGATTTCTCTCACGCAGAATACAATGAGATGGCAGCAGCGCCATCTAATGGGCAGCTTAATGCGGCTGTTGCCTACATCAAGAGCGAGGCA
AACACATGGCTGGGATTCGTCAAGCAGCGCCTGCTTCCAACTACTCATGATTCAACAGTATCTTGGGATTGGGTTCTCCTAGGTTTTGCAATTCTCATATCTCTC
AATATCGATGTCGGAAAAATAATCTCCAACGAAGTTCATAATTGCTGGAGGAAAAAGGTTGCCAAGTTATTCTTCCCCAACACAATTACAATGTTGTGTCAGAGG
GCAGGGGTTCCAACGAGCAATGAAGATATTATTTTGATGGATAAGGGGATTATTGACACACCGAATTTGGTGAGGCTGCAAAGGACTCAGGAGGCATGCCAAGGT
GGTTTGGTGTGTGGCATCCATAGTATTCAGGAGAAATTACAACTGGTGCTCAGTCGTTTGGAGTTCTCTGAAAGGGAGAATCAAACGTACTGGAGCTATACAAAG
ATAAGGGATGTCACCACCAAAAAGGCTTTGCAAAAAAGAGCCCAAGATCCACTACATGAAGCAATTGGGCCAAAGGAAATGAAGGAGGCCAAAAAATTGAGTCAA
AATCGGACCATTCTAGAAGATCCAGGGCCTAGCGTCGCGACGCTAGGCCGAAGTGTCTCGACGCTAGGCAACTATGCGGAAAGATCCAGAAATGGGGTAGCGTCG
CGACACTGCGATGACTTGGAGCCCAAGAAAAGATGA
Protein sequenceShow/hide protein sequence
IPSPQSVDKLERRKQRNLENSQKCDPISGKAKMKCDRISGQSEKLFIFIIFHHSTLHQVAVDWSPGAINSLFNLQDFSHAEYNEMAAAPSNGQLNAAVAYIKSEA
NTWLGFVKQRLLPTTHDSTVSWDWVLLGFAILISLNIDVGKIISNEVHNCWRKKVAKLFFPNTITMLCQRAGVPTSNEDIILMDKGIIDTPNLVRLQRTQEACQG
GLVCGIHSIQEKLQLVLSRLEFSERENQTYWSYTKIRDVTTKKALQKRAQDPLHEAIGPKEMKEAKKLSQNRTILEDPGPSVATLGRSVSTLGNYAERSRNGVAS
RHCDDLEPKKR