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Spg034394 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034394
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description3-hydroxyisobutyrate dehydrogenase
Genome locationscaffold12:23652283..23653643
RNA-Seq ExpressionSpg034394
SyntenySpg034394
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583846.1 putative 3-hydroxyisobutyrate dehydrogenase, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]4.9e-0489.66Show/hide
Query:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
        +SW+NPVMLDAPVS GVLAADAGTLTFMV
Subjt:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
KAG7019466.1 putative 3-hydroxyisobutyrate dehydrogenase, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-0489.66Show/hide
Query:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
        +SW+NPVMLDAPVS GVLAADAGTLTFMV
Subjt:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
XP_022927542.1 probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial isoform X2 [Cucurbita moschata]4.9e-0489.66Show/hide
Query:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
        +SW+NPVMLDAPVS GVLAADAGTLTFMV
Subjt:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
XP_023000831.1 probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial isoform X2 [Cucurbita maxima]4.9e-0489.66Show/hide
Query:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
        +SW+NPVMLDAPVS GVLAADAGTLTFMV
Subjt:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
XP_038894390.1 probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial isoform X1 [Benincasa hispida]4.9e-0456.86Show/hide
Query:  LSPRVVSEPCFSFSPGLRALIPNSWKNPVMLDAPVSVGVLAADAGTLTFMV
        + P+   E   S S  +     +SW+NPVMLDAPVS G+LAADAGTLTFMV
Subjt:  LSPRVVSEPCFSFSPGLRALIPNSWKNPVMLDAPVSVGVLAADAGTLTFMV
TrEMBL top hitse value%identityAlignment
A0A067G6J3 3-hydroxyisobutyrate dehydrogenase6.8e-0486.21Show/hide
Query:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
        +SW+NPVMLDAPVS GVLAA+AGTLTFMV
Subjt:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
A0A6J1EHG8 3-hydroxyisobutyrate dehydrogenase2.3e-0489.66Show/hide
Query:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
        +SW+NPVMLDAPVS GVLAADAGTLTFMV
Subjt:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
A0A6J1EHZ4 3-hydroxyisobutyrate dehydrogenase2.3e-0489.66Show/hide
Query:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
        +SW+NPVMLDAPVS GVLAADAGTLTFMV
Subjt:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
A0A6J1KER6 3-hydroxyisobutyrate dehydrogenase2.3e-0489.66Show/hide
Query:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
        +SW+NPVMLDAPVS GVLAADAGTLTFMV
Subjt:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
A0A6J1KJE2 3-hydroxyisobutyrate dehydrogenase2.3e-0489.66Show/hide
Query:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
        +SW+NPVMLDAPVS GVLAADAGTLTFMV
Subjt:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
SwissProt top hitse value%identityAlignment
Q9SUC0 Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial2.0e-0579.31Show/hide
Query:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
        ++W+ PVMLDAPVS GVLAA+AGTLTFMV
Subjt:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
Arabidopsis top hitse value%identityAlignment
AT4G20930.1 6-phosphogluconate dehydrogenase family protein1.5e-0679.31Show/hide
Query:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV
        ++W+ PVMLDAPVS GVLAA+AGTLTFMV
Subjt:  NSWKNPVMLDAPVSVGVLAADAGTLTFMV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAAAATCTGAGGATCAACACAACGTCGCGACGCTATGGTGGCAGTGTCGTGACGCTAGGCCTTCAACTTCACGCCCAAGTCTTTTCCTTATTTGAGCAGCGTCT
CGACGCTTTGACGGCTCCAAGGGCAGAAATGTCATTTTACGCTCCGGTTCTTTTCGATGCGCTGTGTTGCCTCTTTCAGAGTTGCCCTCAACTCTCTCCTCGAGTTGTTT
CTGAGCCATGCTTCTCGTTCTCCCCAGGATTACGAGCTCTGATACCAAATTCTTGGAAAAACCCTGTCATGTTGGACGCCCCTGTATCCGTAGGGGTTCTAGCTGCTGAT
GCTGGGACACTGACGTTCATGGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAAAATCTGAGGATCAACACAACGTCGCGACGCTATGGTGGCAGTGTCGTGACGCTAGGCCTTCAACTTCACGCCCAAGTCTTTTCCTTATTTGAGCAGCGTCT
CGACGCTTTGACGGCTCCAAGGGCAGAAATGTCATTTTACGCTCCGGTTCTTTTCGATGCGCTGTGTTGCCTCTTTCAGAGTTGCCCTCAACTCTCTCCTCGAGTTGTTT
CTGAGCCATGCTTCTCGTTCTCCCCAGGATTACGAGCTCTGATACCAAATTCTTGGAAAAACCCTGTCATGTTGGACGCCCCTGTATCCGTAGGGGTTCTAGCTGCTGAT
GCTGGGACACTGACGTTCATGGTATAA
Protein sequenceShow/hide protein sequence
MEKNLRINTTSRRYGGSVVTLGLQLHAQVFSLFEQRLDALTAPRAEMSFYAPVLFDALCCLFQSCPQLSPRVVSEPCFSFSPGLRALIPNSWKNPVMLDAPVSVGVLAAD
AGTLTFMV